RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 FBXO10Q9UK96 956 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 CROTQ9UKG9 612 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 PCTPQ9UKL6 214 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 MANSC4A6NHS7 340 aaPredicted RBP5.99□□□□□ -1.45
CLCN3-201ENST00000347613 SLC38A8A6NNN8 435 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 CBX4O00257 560 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 OR7A17O14581 309 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 TAPBPO15533 448 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 RBP1P09455 135 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 OR4D2P58180 307 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 GNA12Q03113 381 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 GALNT1Q10472 559 aaPredicted RBP5.99□□□□□ -1.45
CLCN3-201ENST00000347613 MAPRE1Q15691 268 aaKnown RBP5.99□□□□□ -1.45
CLCN3-201ENST00000347613 KIF19Q2TAC6 998 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 RFTN2Q52LD8 501 aaPredicted RBP5.99□□□□□ -1.45
CLCN3-201ENST00000347613 BLOC1S3Q6QNY0 202 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 ABI1Q8IZP0 508 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 SFRP1Q8N474 314 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 RNF175Q8N4F7 328 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 OR10Q1Q8NGQ4 319 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 ZFAND2BQ8WV99 257 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 AUTS2Q8WXX7 1259 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 TUBGCP3Q96CW5 907 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 TRIM4Q9C037 500 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 POLR1EQ9GZS1 481 aaKnown RBP5.99□□□□□ -1.45
CLCN3-201ENST00000347613 ZNF696Q9H7X3 374 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 NTN4Q9HB63 628 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 ZFYVE28Q9HCC9 887 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 SDR39U1Q9NRG7 319 aaPredicted RBP5.99□□□□□ -1.45
CLCN3-201ENST00000347613 SMPD4Q9NXE4 827 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 EBF1Q9UH73 591 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 AURKCQ9UQB9 309 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 FCF1Q9Y324 198 aaKnown RBP5.99□□□□□ -1.45
CLCN3-201ENST00000347613 UPK3BL1B0FP48 263 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 SUPT3HB4E1H0 165 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 UPK3BL2E5RIL1 263 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 BTN3A1O00481 513 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 AREL1O15033 823 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 MAGEB3O15480 346 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 GREM1O60565 184 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 SUPT3HO75486 399 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 GPC4O75487 556 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 STC2O76061 302 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 BAIAP3O94812 1187 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 C1RP00736 705 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 RPS17P08708 135 aaKnown RBP5.99□□□□□ -1.45
CLCN3-201ENST00000347613 CNPP09543 421 aaKnown RBP5.99□□□□□ -1.45
CLCN3-201ENST00000347613 DNAJB1P25685 340 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 ADSLP30566 484 aaPredicted RBP5.99□□□□□ -1.45
CLCN3-201ENST00000347613 ALG1LQ6GMV1 187 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 GLB1LQ6UWU2 654 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 ZBTB46Q86UZ6 589 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 LCA5Q86VQ0 697 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 LSRQ86X29 649 aaPredicted RBP5.99□□□□□ -1.45
CLCN3-201ENST00000347613 ST13P4Q8IZP2 240 aaPredicted RBP5.99□□□□□ -1.45
CLCN3-201ENST00000347613 FIBCD1Q8N539 461 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 EFHBQ8N7U6 833 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 CDYL2Q8N8U2 506 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 LPCAT1Q8NF37 534 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 TFAP2CQ92754 450 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 RMDN1Q96DB5 314 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 ZFRQ96KR1 1074 aaKnown RBP5.99□□□□□ -1.45
CLCN3-201ENST00000347613 SERPINI1Q99574 410 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 TMEM79Q9BSE2 394 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 FAM192AQ9GZU8 254 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 SARS2Q9NP81 518 aaKnown RBP5.99□□□□□ -1.45
CLCN3-201ENST00000347613 WDR70Q9NW82 654 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 AGO1Q9UL18 857 aaKnown RBP5.99□□□□□ -1.45
CLCN3-201ENST00000347613 OAZ3Q9UMX2 235 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 ERVK-11Q9UQG0 969 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 UPK1AO00322 258 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 ARPC2O15144 300 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 KATNA1O75449 491 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 RHOBTB1O94844 696 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 SEC24DO94855 1032 aaPredicted RBP5.98□□□□□ -1.45
CLCN3-201ENST00000347613 GALTP07902 379 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 GFAPP14136 432 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 CDH2P19022 906 aaPredicted RBP5.98□□□□□ -1.45
CLCN3-201ENST00000347613 CD247P20963 164 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 UGT1A1P22309 533 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 UGT1A4P22310 534 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 VARSP26640 1264 aaKnown RBP5.98□□□□□ -1.45
CLCN3-201ENST00000347613 SLC7A1P30825 629 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 MC4RP32245 332 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 UGT1A3P35503 534 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 UGT1A5P35504 534 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 STT3AP46977 705 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 CLCN7P51798 805 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 EMP3P54852 163 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 TXNL4AP83876 142 aaKnown RBP5.98□□□□□ -1.45
CLCN3-201ENST00000347613 ABRAXAS2Q15018 415 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 PABPC1LQ4VXU2 614 aaKnown RBP5.98□□□□□ -1.45
CLCN3-201ENST00000347613 XKR7Q5GH72 579 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 RARS2Q5T160 578 aaKnown RBP5.98□□□□□ -1.45
CLCN3-201ENST00000347613 DLEU7Q6UYE1 221 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.98□□□□□ -1.452e-8■■□□□ 13
CLCN3-201ENST00000347613 GALNT7Q86SF2 657 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 APCDD1Q8J025 514 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 STON2Q8WXE9 905 aa5.98□□□□□ -1.45
CLCN3-201ENST00000347613 FATE1Q969F0 183 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms