RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 TRIM23P36406 574 aa18.81■□□□□ 0.6
CHMP4A-201ENST00000347519 LIMK2P53671 638 aa18.81■□□□□ 0.6
CHMP4A-201ENST00000347519 CDK3Q00526 305 aa18.81■□□□□ 0.6
CHMP4A-201ENST00000347519 TMED2Q15363 201 aa18.81■□□□□ 0.6
CHMP4A-201ENST00000347519 CTSL3PQ5NE16 218 aa18.81■□□□□ 0.6
CHMP4A-201ENST00000347519 TPRG1LQ5T0D9 272 aa18.81■□□□□ 0.6
CHMP4A-201ENST00000347519 LYPLAL1Q5VWZ2 237 aa18.81■□□□□ 0.6
CHMP4A-201ENST00000347519 CLDN19Q8N6F1 224 aa18.81■□□□□ 0.6
CHMP4A-201ENST00000347519 TMEM145Q8NBT3 493 aa18.81■□□□□ 0.6
CHMP4A-201ENST00000347519 DENND6BQ8NEG7 585 aa18.81■□□□□ 0.6
CHMP4A-201ENST00000347519 CADM4Q8NFZ8 388 aa18.81■□□□□ 0.6
CHMP4A-201ENST00000347519 GDAP1Q8TB36 358 aa18.81■□□□□ 0.6
CHMP4A-201ENST00000347519 MZB1Q8WU39 189 aa18.81■□□□□ 0.6
CHMP4A-201ENST00000347519 HIC2Q96JB3 615 aa18.81■□□□□ 0.6
CHMP4A-201ENST00000347519 VPS39Q96JC1 886 aa18.81■□□□□ 0.6
CHMP4A-201ENST00000347519 BIRC8Q96P09 236 aa18.81■□□□□ 0.6
CHMP4A-201ENST00000347519 NDNQ99608 321 aa18.81■□□□□ 0.6
CHMP4A-201ENST00000347519 COPS8Q99627 209 aa18.81■□□□□ 0.6
CHMP4A-201ENST00000347519 ZNF180Q9UJW8 692 aa18.81■□□□□ 0.6
CHMP4A-201ENST00000347519 TNRC6BQ9UPQ9 1833 aaKnown RBP18.8■□□□□ 0.6
CHMP4A-201ENST00000347519 A0A1W2PPC4 97 aa18.8■□□□□ 0.6
CHMP4A-201ENST00000347519 MAP3K13O43283 966 aa18.8■□□□□ 0.6
CHMP4A-201ENST00000347519 SGTAO43765 313 aa18.8■□□□□ 0.6
CHMP4A-201ENST00000347519 ITGA2BP08514 1039 aa18.8■□□□□ 0.6
CHMP4A-201ENST00000347519 AKT2P31751 481 aa18.8■□□□□ 0.6
CHMP4A-201ENST00000347519 PTGER3P43115 390 aa18.8■□□□□ 0.6
CHMP4A-201ENST00000347519 TIAL1Q01085 375 aaKnown RBP eCLIP18.8■□□□□ 0.6
CHMP4A-201ENST00000347519 PDE1CQ14123 709 aaPredicted RBP18.8■□□□□ 0.6
CHMP4A-201ENST00000347519 ITIH4Q14624 930 aa18.8■□□□□ 0.6
CHMP4A-201ENST00000347519 MROH9Q5TGP6 573 aa18.8■□□□□ 0.6
CHMP4A-201ENST00000347519 ADGRG6Q86SQ4 1221 aa18.8■□□□□ 0.6
CHMP4A-201ENST00000347519 GABPB2Q8TAK5 448 aaPredicted RBP18.8■□□□□ 0.6
CHMP4A-201ENST00000347519 GAB3Q8WWW8 586 aa18.8■□□□□ 0.6
CHMP4A-201ENST00000347519 SCG3Q8WXD2 468 aaKnown RBP18.8■□□□□ 0.6
CHMP4A-201ENST00000347519 HSPA12BQ96MM6 686 aa18.8■□□□□ 0.6
CHMP4A-201ENST00000347519 SLC6A18Q96N87 628 aa18.8■□□□□ 0.6
CHMP4A-201ENST00000347519 APOOQ9BUR5 198 aa18.8■□□□□ 0.6
CHMP4A-201ENST00000347519 PCED1AQ9H1Q7 454 aa18.8■□□□□ 0.6
CHMP4A-201ENST00000347519 TXNDC16Q9P2K2 825 aa18.8■□□□□ 0.6
CHMP4A-201ENST00000347519 LGALS13Q9UHV8 139 aa18.8■□□□□ 0.6
CHMP4A-201ENST00000347519 TMEM98Q9Y2Y6 226 aa18.8■□□□□ 0.6
CHMP4A-201ENST00000347519 PCYT1BQ9Y5K3 369 aaPredicted RBP18.8■□□□□ 0.6
CHMP4A-201ENST00000347519 IKBKGQ9Y6K9 419 aa18.8■□□□□ 0.6
CHMP4A-201ENST00000347519 WDFY4Q6ZS81 3184 aa18.79■□□□□ 0.6
CHMP4A-201ENST00000347519 PRAMEF26H0Y7S4 382 aa18.79■□□□□ 0.6
CHMP4A-201ENST00000347519 CDH16O75309 829 aa18.79■□□□□ 0.6
CHMP4A-201ENST00000347519 SP9P0CG40 484 aa18.79■□□□□ 0.6
CHMP4A-201ENST00000347519 AKT1P31749 480 aa18.79■□□□□ 0.6
CHMP4A-201ENST00000347519 SPRP35270 261 aaPredicted RBP18.79■□□□□ 0.6
CHMP4A-201ENST00000347519 POLD2P49005 469 aa18.79■□□□□ 0.6
CHMP4A-201ENST00000347519 RASA2Q15283 850 aa18.79■□□□□ 0.6
CHMP4A-201ENST00000347519 ANGPT1Q15389 498 aa18.79■□□□□ 0.6
CHMP4A-201ENST00000347519 LDLRAP1Q5SW96 308 aa18.79■□□□□ 0.6
CHMP4A-201ENST00000347519 RNF187Q5TA31 235 aaPredicted RBP18.79■□□□□ 0.6
CHMP4A-201ENST00000347519 KCTD16Q68DU8 428 aa18.79■□□□□ 0.6
CHMP4A-201ENST00000347519 ARMCX6Q7L4S7 300 aa18.79■□□□□ 0.6
CHMP4A-201ENST00000347519 DET1Q7L5Y6 550 aa18.79■□□□□ 0.6
CHMP4A-201ENST00000347519 PHYKPLQ8IUZ5 450 aa18.79■□□□□ 0.6
CHMP4A-201ENST00000347519 RBFAQ8N0V3 343 aa18.79■□□□□ 0.6
CHMP4A-201ENST00000347519 DCLK2Q8N568 766 aa18.79■□□□□ 0.6
CHMP4A-201ENST00000347519 RASGEF1AQ8N9B8 481 aa18.79■□□□□ 0.6
CHMP4A-201ENST00000347519 LKAAEAR1Q8TD35 194 aa18.79■□□□□ 0.6
CHMP4A-201ENST00000347519 ARL8AQ96BM9 186 aa18.79■□□□□ 0.6
CHMP4A-201ENST00000347519 SERAC1Q96JX3 654 aa18.79■□□□□ 0.6
CHMP4A-201ENST00000347519 GPR22Q99680 433 aa18.79■□□□□ 0.6
CHMP4A-201ENST00000347519 OLFM1Q99784 485 aa18.79■□□□□ 0.6
CHMP4A-201ENST00000347519 AARSD1Q9BTE6 412 aaKnown RBP18.79■□□□□ 0.6
CHMP4A-201ENST00000347519 WDR26Q9H7D7 661 aa18.79■□□□□ 0.6
CHMP4A-201ENST00000347519 CAB39LQ9H9S4 337 aa18.79■□□□□ 0.6
CHMP4A-201ENST00000347519 PPCSQ9HAB8 311 aa18.79■□□□□ 0.6
CHMP4A-201ENST00000347519 TMBIM4Q9HC24 238 aa18.79■□□□□ 0.6
CHMP4A-201ENST00000347519 ATXN10Q9UBB4 475 aa18.79■□□□□ 0.6
CHMP4A-201ENST00000347519 EIF2B4Q9UI10 523 aaKnown RBP18.79■□□□□ 0.6
CHMP4A-201ENST00000347519 DMTF1Q9Y222 760 aa18.79■□□□□ 0.6
CHMP4A-201ENST00000347519 MED16Q9Y2X0 877 aa18.79■□□□□ 0.6
CHMP4A-201ENST00000347519 HS3ST3A1Q9Y663 406 aa18.79■□□□□ 0.6
CHMP4A-201ENST00000347519 FAM95CA0A1B0GW59 222 aa18.78■□□□□ 0.6
CHMP4A-201ENST00000347519 A0A1W2PPM1 405 aa18.78■□□□□ 0.6
CHMP4A-201ENST00000347519 IQCF5A8MTL0 148 aa18.78■□□□□ 0.6
CHMP4A-201ENST00000347519 TRIM49D1C9J1S8 452 aa18.78■□□□□ 0.6
CHMP4A-201ENST00000347519 PRMT5O14744 637 aaPredicted RBP18.78■□□□□ 0.6
CHMP4A-201ENST00000347519 FPGTO14772 594 aa18.78■□□□□ 0.6
CHMP4A-201ENST00000347519 PYGLP06737 847 aa18.78■□□□□ 0.6
CHMP4A-201ENST00000347519 ZNF7P17097 686 aaPredicted RBP18.78■□□□□ 0.6
CHMP4A-201ENST00000347519 CD27P26842 260 aa18.78■□□□□ 0.6
CHMP4A-201ENST00000347519 GMPRP36959 345 aa18.78■□□□□ 0.6
CHMP4A-201ENST00000347519 SERPINB9P50453 376 aa18.78■□□□□ 0.6
CHMP4A-201ENST00000347519 CTSCP53634 463 aa18.78■□□□□ 0.6
CHMP4A-201ENST00000347519 CDKN2DP55273 166 aa18.78■□□□□ 0.6
CHMP4A-201ENST00000347519 PFN3P60673 137 aa18.78■□□□□ 0.6
CHMP4A-201ENST00000347519 TMEM115Q12893 351 aaPredicted RBP18.78■□□□□ 0.6
CHMP4A-201ENST00000347519 HECTD2Q5U5R9 776 aa18.78■□□□□ 0.6
CHMP4A-201ENST00000347519 DOK6Q6PKX4 331 aa18.78■□□□□ 0.6
CHMP4A-201ENST00000347519 GPATCH11Q8N954 259 aa18.78■□□□□ 0.6
CHMP4A-201ENST00000347519 FOXJ1Q92949 421 aa18.78■□□□□ 0.6
CHMP4A-201ENST00000347519 SGF29Q96ES7 293 aa18.78■□□□□ 0.6
CHMP4A-201ENST00000347519 RUFY1Q96T51 708 aa18.78■□□□□ 0.6
CHMP4A-201ENST00000347519 SH3GL2Q99962 352 aa18.78■□□□□ 0.6
CHMP4A-201ENST00000347519 DUSP15Q9H1R2 295 aaPredicted RBP18.78■□□□□ 0.6
CHMP4A-201ENST00000347519 OR2AG1Q9H205 316 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms