RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 ZNF711Q9Y462 761 aa9.19□□□□□ -0.94
ATG4A-202ENST00000345734 WNT6Q9Y6F9 365 aa9.19□□□□□ -0.94
ATG4A-202ENST00000345734 UBA6A0AVT1 1052 aaPredicted RBP9.18□□□□□ -0.94
ATG4A-202ENST00000345734 TMEM114B3SHH9 223 aa9.18□□□□□ -0.94
ATG4A-202ENST00000345734 ZNF195O14628 629 aa9.18□□□□□ -0.94
ATG4A-202ENST00000345734 TRIM24O15164 1050 aa9.18□□□□□ -0.94
ATG4A-202ENST00000345734 STX7O15400 261 aaKnown RBP9.18□□□□□ -0.94
ATG4A-202ENST00000345734 PENKP01210 267 aaPredicted RBP9.18□□□□□ -0.94
ATG4A-202ENST00000345734 HNRNPA1P09651 372 aaKnown RBP eCLIP9.18□□□□□ -0.94
ATG4A-202ENST00000345734 LTA4HP09960 611 aaKnown RBP9.18□□□□□ -0.94
ATG4A-202ENST00000345734 EZRP15311 586 aaKnown RBP9.18□□□□□ -0.94
ATG4A-202ENST00000345734 NQO1P15559 274 aaKnown RBP9.18□□□□□ -0.94
ATG4A-202ENST00000345734 KCNA5P22460 613 aa9.18□□□□□ -0.94
ATG4A-202ENST00000345734 FMO4P31512 558 aa9.18□□□□□ -0.94
ATG4A-202ENST00000345734 SKIV2L2P42285 1042 aaKnown RBP9.18□□□□□ -0.94
ATG4A-202ENST00000345734 NAGLUP54802 743 aa9.18□□□□□ -0.94
ATG4A-202ENST00000345734 BCL2L1Q07817 233 aa9.18□□□□□ -0.94
ATG4A-202ENST00000345734 GPM6BQ13491 265 aa9.18□□□□□ -0.94
ATG4A-202ENST00000345734 PEX6Q13608 980 aa9.18□□□□□ -0.94
ATG4A-202ENST00000345734 FAM83EQ2M2I3 478 aa9.18□□□□□ -0.94
ATG4A-202ENST00000345734 TECRLQ5HYJ1 363 aa9.18□□□□□ -0.94
ATG4A-202ENST00000345734 RALGPS1Q5JS13 557 aa9.18□□□□□ -0.94
ATG4A-202ENST00000345734 LY6G5CQ5SRR4 150 aa9.18□□□□□ -0.94
ATG4A-202ENST00000345734 AGAP9Q5VTM2 703 aa9.18□□□□□ -0.94
ATG4A-202ENST00000345734 FAM45BPQ6NSW5 357 aa9.18□□□□□ -0.94
ATG4A-202ENST00000345734 ZSWIM9Q86XI8 627 aa9.18□□□□□ -0.94
ATG4A-202ENST00000345734 WDR75Q8IWA0 830 aaKnown RBP9.18□□□□□ -0.94
ATG4A-202ENST00000345734 ITFG1Q8TB96 612 aa9.18□□□□□ -0.94
ATG4A-202ENST00000345734 FAM45AQ8TCE6 357 aa9.18□□□□□ -0.94
ATG4A-202ENST00000345734 AGR3Q8TD06 166 aa9.18□□□□□ -0.94
ATG4A-202ENST00000345734 MIPOL1Q8TD10 442 aa9.18□□□□□ -0.94
ATG4A-202ENST00000345734 LPGAT1Q92604 370 aa9.18□□□□□ -0.94
ATG4A-202ENST00000345734 LRRC3BQ96PB8 259 aa9.18□□□□□ -0.94
ATG4A-202ENST00000345734 AARSD1Q9BTE6 412 aaKnown RBP9.18□□□□□ -0.94
ATG4A-202ENST00000345734 WWP1Q9H0M0 922 aa9.18□□□□□ -0.94
ATG4A-202ENST00000345734 PIKFYVEQ9Y2I7 2098 aa9.18□□□□□ -0.94
ATG4A-202ENST00000345734 PDLIM1O00151 329 aa9.17□□□□□ -0.94
ATG4A-202ENST00000345734 ZSCAN9O15535 394 aaPredicted RBP9.17□□□□□ -0.94
ATG4A-202ENST00000345734 HTRA2O43464 458 aaPredicted RBP9.17□□□□□ -0.94
ATG4A-202ENST00000345734 OR1I1O60431 355 aa9.17□□□□□ -0.94
ATG4A-202ENST00000345734 RASSF9O75901 435 aa9.17□□□□□ -0.94
ATG4A-202ENST00000345734 IGSF6O95976 241 aa9.17□□□□□ -0.94
ATG4A-202ENST00000345734 TYRP14679 529 aa9.17□□□□□ -0.94
ATG4A-202ENST00000345734 KCNC1P48547 511 aa9.17□□□□□ -0.94
ATG4A-202ENST00000345734 ALDH18A1P54886 795 aaKnown RBP9.17□□□□□ -0.94
ATG4A-202ENST00000345734 SEMG2Q02383 582 aa9.17□□□□□ -0.94
ATG4A-202ENST00000345734 TUBB3Q13509 450 aa9.17□□□□□ -0.94
ATG4A-202ENST00000345734 ZRANB3Q5FWF4 1079 aa9.17□□□□□ -0.94
ATG4A-202ENST00000345734 SYT9Q86SS6 491 aa9.17□□□□□ -0.94
ATG4A-202ENST00000345734 LSMEM2Q8N112 164 aa9.17□□□□□ -0.94
ATG4A-202ENST00000345734 NAT16Q8N8M0 369 aa9.17□□□□□ -0.94
ATG4A-202ENST00000345734 SLC7A6OSQ96CW6 309 aaPredicted RBP9.17□□□□□ -0.94
ATG4A-202ENST00000345734 RILPQ96NA2 401 aa9.17□□□□□ -0.94
ATG4A-202ENST00000345734 GPR63Q9BZJ6 419 aa9.17□□□□□ -0.94
ATG4A-202ENST00000345734 SHCBP1LQ9BZQ2 653 aa9.17□□□□□ -0.94
ATG4A-202ENST00000345734 DRC3Q9H069 523 aa9.17□□□□□ -0.94
ATG4A-202ENST00000345734 ALG9Q9H6U8 611 aa9.17□□□□□ -0.94
ATG4A-202ENST00000345734 RMI1Q9H9A7 625 aa9.17□□□□□ -0.94
ATG4A-202ENST00000345734 CYP4F12Q9HCS2 524 aa9.17□□□□□ -0.94
ATG4A-202ENST00000345734 ARHGEF3Q9NR81 526 aa9.17□□□□□ -0.94
ATG4A-202ENST00000345734 SPHK2Q9NRA0 654 aa9.17□□□□□ -0.94
ATG4A-202ENST00000345734 INTS10Q9NVR2 710 aaKnown RBP9.17□□□□□ -0.94
ATG4A-202ENST00000345734 IL17CQ9P0M4 197 aa9.17□□□□□ -0.94
ATG4A-202ENST00000345734 SLCO3A1Q9UIG8 710 aa9.17□□□□□ -0.94
ATG4A-202ENST00000345734 YBX2Q9Y2T7 364 aaKnown RBP9.17□□□□□ -0.94
ATG4A-202ENST00000345734 MED16Q9Y2X0 877 aa9.17□□□□□ -0.94
ATG4A-202ENST00000345734 A0A0J9YYE9 177 aa9.17□□□□□ -0.94
ATG4A-202ENST00000345734 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.17□□□□□ -0.94
ATG4A-202ENST00000345734 CFAP73A6NFT4 308 aa9.17□□□□□ -0.94
ATG4A-202ENST00000345734 A8MX80 341 aa9.17□□□□□ -0.94
ATG4A-202ENST00000345734 ZBTB14O43829 449 aa9.17□□□□□ -0.94
ATG4A-202ENST00000345734 H2AFYO75367 372 aaKnown RBP9.17□□□□□ -0.94
ATG4A-202ENST00000345734 NDUFS3O75489 264 aa9.17□□□□□ -0.94
ATG4A-202ENST00000345734 TRBC1P01850 177 aa9.17□□□□□ -0.94
ATG4A-202ENST00000345734 FESP07332 822 aa9.17□□□□□ -0.94
ATG4A-202ENST00000345734 KRT16P08779 473 aa9.17□□□□□ -0.94
ATG4A-202ENST00000345734 PABPC1P11940 636 aaKnown RBP9.17□□□□□ -0.94
ATG4A-202ENST00000345734 ATF4P18848 351 aaPredicted RBP9.17□□□□□ -0.94
ATG4A-202ENST00000345734 CA5AP35218 305 aa9.17□□□□□ -0.94
ATG4A-202ENST00000345734 HNF1BP35680 557 aa9.17□□□□□ -0.94
ATG4A-202ENST00000345734 CSNK1DP48730 415 aa9.17□□□□□ -0.94
ATG4A-202ENST00000345734 XIAPP98170 497 aa9.17□□□□□ -0.94
ATG4A-202ENST00000345734 PFKPQ01813 784 aa9.17□□□□□ -0.94
ATG4A-202ENST00000345734 RCN2Q14257 317 aa9.17□□□□□ -0.94
ATG4A-202ENST00000345734 SHHQ15465 462 aa9.17□□□□□ -0.94
ATG4A-202ENST00000345734 SETMARQ53H47 684 aaPredicted RBP9.17□□□□□ -0.94
ATG4A-202ENST00000345734 ARL13AQ5H913 290 aaPredicted RBP9.17□□□□□ -0.94
ATG4A-202ENST00000345734 SPDYAQ5MJ70 313 aa9.17□□□□□ -0.94
ATG4A-202ENST00000345734 C22orf39Q6P5X5 142 aa9.17□□□□□ -0.94
ATG4A-202ENST00000345734 FBXL19Q6PCT2 694 aa9.17□□□□□ -0.94
ATG4A-202ENST00000345734 PAF1Q8N7H5 531 aa9.17□□□□□ -0.94
ATG4A-202ENST00000345734 CCNYL1Q8N7R7 359 aa9.17□□□□□ -0.94
ATG4A-202ENST00000345734 OR2AP1Q8NGE2 309 aa9.17□□□□□ -0.94
ATG4A-202ENST00000345734 PTERQ96BW5 349 aa9.17□□□□□ -0.94
ATG4A-202ENST00000345734 PTCD3Q96EY7 689 aaKnown RBP9.17□□□□□ -0.94
ATG4A-202ENST00000345734 CDH19Q9H159 772 aa9.17□□□□□ -0.94
ATG4A-202ENST00000345734 POMKQ9H5K3 350 aa9.17□□□□□ -0.94
ATG4A-202ENST00000345734 ATP13A3Q9H7F0 1226 aa9.17□□□□□ -0.94
ATG4A-202ENST00000345734 MAGEE1Q9HCI5 957 aa9.17□□□□□ -0.94
ATG4A-202ENST00000345734 SAR1AQ9NR31 198 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms