RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 KIAA1191Q96A73 305 aa13.44□□□□□ -0.26
CDC42-202ENST00000344548 ESAMQ96AP7 390 aa13.44□□□□□ -0.26
CDC42-202ENST00000344548 SLC7A6OSQ96CW6 309 aaPredicted RBP13.44□□□□□ -0.26
CDC42-202ENST00000344548 LINGO1Q96FE5 620 aa13.44□□□□□ -0.26
CDC42-202ENST00000344548 RILPQ96NA2 401 aa13.44□□□□□ -0.26
CDC42-202ENST00000344548 NSUN5Q96P11 429 aaKnown RBP13.44□□□□□ -0.26
CDC42-202ENST00000344548 OR52B2Q96RD2 323 aa13.44□□□□□ -0.26
CDC42-202ENST00000344548 DERL2Q9GZP9 239 aa13.44□□□□□ -0.26
CDC42-202ENST00000344548 THG1LQ9NWX6 298 aaKnown RBP13.44□□□□□ -0.26
CDC42-202ENST00000344548 CLDND1Q9NY35 253 aa13.44□□□□□ -0.26
CDC42-202ENST00000344548 RAP2CQ9Y3L5 183 aa13.44□□□□□ -0.26
CDC42-202ENST00000344548 ASB1Q9Y576 335 aa13.44□□□□□ -0.26
CDC42-202ENST00000344548 GOLGA8QA0A0J9YX86 632 aa13.44□□□□□ -0.26
CDC42-202ENST00000344548 TSPAN11A1L157 253 aa13.44□□□□□ -0.26
CDC42-202ENST00000344548 GOLGA8OA6NCC3 632 aa13.44□□□□□ -0.26
CDC42-202ENST00000344548 UPK3BL1B0FP48 263 aa13.44□□□□□ -0.26
CDC42-202ENST00000344548 UPK3BL2E5RIL1 263 aa13.44□□□□□ -0.26
CDC42-202ENST00000344548 GOLGA8NF8WBI6 632 aa13.44□□□□□ -0.26
CDC42-202ENST00000344548 ARNTLO00327 626 aa13.44□□□□□ -0.26
CDC42-202ENST00000344548 MATN2O00339 956 aa13.44□□□□□ -0.26
CDC42-202ENST00000344548 BTN3A1O00481 513 aa13.44□□□□□ -0.26
CDC42-202ENST00000344548 DIAPH2O60879 1101 aa13.44□□□□□ -0.26
CDC42-202ENST00000344548 HOXB8P17481 243 aaPredicted RBP13.44□□□□□ -0.26
CDC42-202ENST00000344548 PSMC3P17980 439 aa13.44□□□□□ -0.26
CDC42-202ENST00000344548 VASPP50552 380 aaPredicted RBP13.44□□□□□ -0.26
CDC42-202ENST00000344548 ST8SIA6P61647 398 aa13.44□□□□□ -0.26
CDC42-202ENST00000344548 ZBTB16Q05516 673 aa13.44□□□□□ -0.26
CDC42-202ENST00000344548 HNRNPA1L2Q32P51 320 aaKnown RBP13.44□□□□□ -0.26
CDC42-202ENST00000344548 UNC50Q53HI1 259 aa13.44□□□□□ -0.26
CDC42-202ENST00000344548 ZNF648Q5T619 568 aaPredicted RBP13.44□□□□□ -0.26
CDC42-202ENST00000344548 PIWIL4Q7Z3Z4 852 aaKnown RBP13.44□□□□□ -0.26
CDC42-202ENST00000344548 PTGR2Q8N8N7 351 aaPredicted RBP13.44□□□□□ -0.26
CDC42-202ENST00000344548 ARRDC3Q96B67 414 aa13.44□□□□□ -0.26
CDC42-202ENST00000344548 ILKAPQ9H0C8 392 aaPredicted RBP13.44□□□□□ -0.26
CDC42-202ENST00000344548 TFB2MQ9H5Q4 396 aaKnown RBP13.44□□□□□ -0.26
CDC42-202ENST00000344548 SYTL2Q9HCH5 934 aa13.44□□□□□ -0.26
CDC42-202ENST00000344548 CACNA2D2Q9NY47 1150 aa13.44□□□□□ -0.26
CDC42-202ENST00000344548 TRMT6Q9UJA5 497 aaKnown RBP13.44□□□□□ -0.26
CDC42-202ENST00000344548 F5P12259 2224 aa13.44□□□□□ -0.26
CDC42-202ENST00000344548 CCDC189A1A4V9 331 aa13.43□□□□□ -0.26
CDC42-202ENST00000344548 NCF1BA6NI72 391 aaPredicted RBP13.43□□□□□ -0.26
CDC42-202ENST00000344548 NCF1CA8MVU1 366 aaPredicted RBP13.43□□□□□ -0.26
CDC42-202ENST00000344548 E5RI56 91 aa13.43□□□□□ -0.26
CDC42-202ENST00000344548 ECI2O75521 394 aa13.43□□□□□ -0.26
CDC42-202ENST00000344548 TRIOO75962 3097 aa13.43□□□□□ -0.26
CDC42-202ENST00000344548 SLC25A14O95258 325 aaPredicted RBP13.43□□□□□ -0.26
CDC42-202ENST00000344548 TRIM16O95361 564 aa13.43□□□□□ -0.26
CDC42-202ENST00000344548 NCF1P14598 390 aaPredicted RBP13.43□□□□□ -0.26
CDC42-202ENST00000344548 ZNF7P17097 686 aaPredicted RBP13.43□□□□□ -0.26
CDC42-202ENST00000344548 WASP42768 502 aa13.43□□□□□ -0.26
CDC42-202ENST00000344548 RPL14P50914 215 aaKnown RBP13.43□□□□□ -0.26
CDC42-202ENST00000344548 KPNA2P52292 529 aaKnown RBP13.43□□□□□ -0.26
CDC42-202ENST00000344548 POLR2LP62875 67 aaKnown RBP13.43□□□□□ -0.26
CDC42-202ENST00000344548 ADGRE1Q14246 886 aa13.43□□□□□ -0.26
CDC42-202ENST00000344548 ZNF678Q5SXM1 525 aa13.43□□□□□ -0.26
CDC42-202ENST00000344548 EGFLAMQ63HQ2 1017 aa13.43□□□□□ -0.26
CDC42-202ENST00000344548 PTRHD1Q6GMV3 140 aaKnown RBP13.43□□□□□ -0.26
CDC42-202ENST00000344548 EPGNQ6UW88 154 aa13.43□□□□□ -0.26
CDC42-202ENST00000344548 ASRGL1Q7L266 308 aa13.43□□□□□ -0.26
CDC42-202ENST00000344548 RBFAQ8N0V3 343 aa13.43□□□□□ -0.26
CDC42-202ENST00000344548 MICALL1Q8N3F8 863 aa13.43□□□□□ -0.26
CDC42-202ENST00000344548 GBP7Q8N8V2 638 aaPredicted RBP13.43□□□□□ -0.26
CDC42-202ENST00000344548 EZH1Q92800 747 aaPredicted RBP13.43□□□□□ -0.26
CDC42-202ENST00000344548 NUF2Q9BZD4 464 aa13.43□□□□□ -0.26
CDC42-202ENST00000344548 CLPBQ9H078 707 aa13.43□□□□□ -0.26
CDC42-202ENST00000344548 WWP1Q9H0M0 922 aa13.43□□□□□ -0.26
CDC42-202ENST00000344548 ACTR5Q9H9F9 607 aaPredicted RBP13.43□□□□□ -0.26
CDC42-202ENST00000344548 PPM1HQ9ULR3 514 aa13.43□□□□□ -0.26
CDC42-202ENST00000344548 VPS9D1Q9Y2B5 631 aa13.43□□□□□ -0.26
CDC42-202ENST00000344548 DHRS7Q9Y394 339 aa13.43□□□□□ -0.26
CDC42-202ENST00000344548 FADS2P1A8MWK0 482 aa13.43□□□□□ -0.26
CDC42-202ENST00000344548 IMPDH1P20839 514 aa13.43□□□□□ -0.26
CDC42-202ENST00000344548 EPHA3P29320 983 aa13.43□□□□□ -0.26
CDC42-202ENST00000344548 VIPR1P32241 457 aa13.43□□□□□ -0.26
CDC42-202ENST00000344548 AGTR2P50052 363 aa13.43□□□□□ -0.26
CDC42-202ENST00000344548 DET1Q7L5Y6 550 aa13.43□□□□□ -0.26
CDC42-202ENST00000344548 CCDC91Q7Z6B0 441 aa13.43□□□□□ -0.26
CDC42-202ENST00000344548 FBXO27Q8NI29 283 aa13.43□□□□□ -0.26
CDC42-202ENST00000344548 RHEBL1Q8TAI7 183 aa13.43□□□□□ -0.26
CDC42-202ENST00000344548 C19orf43Q9BQ61 176 aa13.43□□□□□ -0.26
CDC42-202ENST00000344548 WRAP53Q9BUR4 548 aaKnown RBP13.43□□□□□ -0.26
CDC42-202ENST00000344548 UTP6Q9NYH9 597 aaKnown RBP13.43□□□□□ -0.26
CDC42-202ENST00000344548 SLC8A2Q9UPR5 921 aa13.43□□□□□ -0.26
CDC42-202ENST00000344548 COQ6Q9Y2Z9 468 aa13.43□□□□□ -0.26
CDC42-202ENST00000344548 FIS1Q9Y3D6 152 aa13.43□□□□□ -0.26
CDC42-202ENST00000344548 CAPN14A8MX76 684 aa13.42□□□□□ -0.26
CDC42-202ENST00000344548 NEMP1O14524 444 aa13.42□□□□□ -0.26
CDC42-202ENST00000344548 NPHS1O60500 1241 aa13.42□□□□□ -0.26
CDC42-202ENST00000344548 H2AFYO75367 372 aaKnown RBP13.42□□□□□ -0.26
CDC42-202ENST00000344548 SUPT7LO94864 414 aa13.42□□□□□ -0.26
CDC42-202ENST00000344548 KAT7O95251 611 aa13.42□□□□□ -0.26
CDC42-202ENST00000344548 PYGLP06737 847 aa13.42□□□□□ -0.26
CDC42-202ENST00000344548 CD9P21926 228 aa13.42□□□□□ -0.26
CDC42-202ENST00000344548 RPS3P23396 243 aaKnown RBP eCLIP13.42□□□□□ -0.263e-8■■■■□ 24.5
CDC42-202ENST00000344548 ARHGEF7Q14155 803 aa13.42□□□□□ -0.26
CDC42-202ENST00000344548 C18orf21Q32NC0 220 aaPredicted RBP13.42□□□□□ -0.26
CDC42-202ENST00000344548 GPR33Q49SQ1 333 aa13.42□□□□□ -0.26
CDC42-202ENST00000344548 ACSBG2Q5FVE4 666 aa13.42□□□□□ -0.26
CDC42-202ENST00000344548 CFAP157Q5JU67 520 aa13.42□□□□□ -0.26
CDC42-202ENST00000344548 SH2D4BQ5SQS7 431 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms