RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 TEX51A0A1B0GUA7 166 aa19.91■□□□□ 0.78
SYNE2-201ENST00000341472 VEGFDO43915 354 aa19.91■□□□□ 0.78
SYNE2-201ENST00000341472 ANXA9O76027 345 aa19.91■□□□□ 0.78
SYNE2-201ENST00000341472 CDK14O94921 469 aa19.91■□□□□ 0.78
SYNE2-201ENST00000341472 TJP3O95049 919 aa19.91■□□□□ 0.78
SYNE2-201ENST00000341472 ITIH1P19827 911 aa19.91■□□□□ 0.78
SYNE2-201ENST00000341472 HLA-DPA1P20036 260 aa19.91■□□□□ 0.78
SYNE2-201ENST00000341472 PTPN7P35236 360 aa19.91■□□□□ 0.78
SYNE2-201ENST00000341472 CLCNKAP51800 687 aa19.91■□□□□ 0.78
SYNE2-201ENST00000341472 LIMK2P53671 638 aa19.91■□□□□ 0.78
SYNE2-201ENST00000341472 MAPK10P53779 464 aa19.91■□□□□ 0.78
SYNE2-201ENST00000341472 EIF3EP60228 445 aaKnown RBP19.91■□□□□ 0.78
SYNE2-201ENST00000341472 GPLD1P80108 840 aa19.91■□□□□ 0.78
SYNE2-201ENST00000341472 OTUD4Q01804 1114 aaKnown RBP19.91■□□□□ 0.78
SYNE2-201ENST00000341472 CLN3Q13286 438 aa19.91■□□□□ 0.78
SYNE2-201ENST00000341472 TRA2AQ13595 282 aaKnown RBP eCLIP19.91■□□□□ 0.78
SYNE2-201ENST00000341472 SLC1A5Q15758 541 aa19.91■□□□□ 0.78
SYNE2-201ENST00000341472 CHCHD2P9Q5T1J5 151 aaPredicted RBP19.91■□□□□ 0.78
SYNE2-201ENST00000341472 ARHGAP40Q5TG30 622 aa19.91■□□□□ 0.78
SYNE2-201ENST00000341472 ITPRIPL1Q6GPH6 555 aa19.91■□□□□ 0.78
SYNE2-201ENST00000341472 DARS2Q6PI48 645 aaKnown RBP19.91■□□□□ 0.78
SYNE2-201ENST00000341472 SLC9B2Q86UD5 537 aa19.91■□□□□ 0.78
SYNE2-201ENST00000341472 TTC30BQ8N4P2 665 aa19.91■□□□□ 0.78
SYNE2-201ENST00000341472 OR4D9Q8NGE8 314 aa19.91■□□□□ 0.78
SYNE2-201ENST00000341472 OR10G6Q8NH81 332 aa19.91■□□□□ 0.78
SYNE2-201ENST00000341472 USP7Q93009 1102 aa19.91■□□□□ 0.78
SYNE2-201ENST00000341472 STN1Q9H668 368 aaKnown RBP19.91■□□□□ 0.78
SYNE2-201ENST00000341472 IL26Q9NPH9 171 aa19.91■□□□□ 0.78
SYNE2-201ENST00000341472 KLC4Q9NSK0 619 aa19.91■□□□□ 0.78
SYNE2-201ENST00000341472 WDR70Q9NW82 654 aa19.91■□□□□ 0.78
SYNE2-201ENST00000341472 ADGRG1Q9Y653 693 aa19.91■□□□□ 0.78
SYNE2-201ENST00000341472 KIR2DS5A0A0G2JLQ3 304 aa19.9■□□□□ 0.78
SYNE2-201ENST00000341472 A0A0G2JNG1 304 aa19.9■□□□□ 0.78
SYNE2-201ENST00000341472 MACROD2A1Z1Q3 448 aa19.9■□□□□ 0.78
SYNE2-201ENST00000341472 GRID2IPA4D2P6 1211 aa19.9■□□□□ 0.78
SYNE2-201ENST00000341472 A6NCN8 305 aa19.9■□□□□ 0.78
SYNE2-201ENST00000341472 KIR2DS3K7RE56 304 aa19.9■□□□□ 0.78
SYNE2-201ENST00000341472 HGSO14964 777 aaPredicted RBP19.9■□□□□ 0.78
SYNE2-201ENST00000341472 CHUKO15111 745 aa19.9■□□□□ 0.78
SYNE2-201ENST00000341472 KMOO15229 486 aa19.9■□□□□ 0.78
SYNE2-201ENST00000341472 PYGMP11217 842 aa19.9■□□□□ 0.78
SYNE2-201ENST00000341472 F3P13726 295 aa19.9■□□□□ 0.78
SYNE2-201ENST00000341472 ETV5P41161 510 aa19.9■□□□□ 0.78
SYNE2-201ENST00000341472 GEMP55040 296 aa19.9■□□□□ 0.78
SYNE2-201ENST00000341472 HHEXQ03014 270 aa19.9■□□□□ 0.78
SYNE2-201ENST00000341472 CFHR1Q03591 330 aa19.9■□□□□ 0.78
SYNE2-201ENST00000341472 VAC14Q08AM6 782 aa19.9■□□□□ 0.78
SYNE2-201ENST00000341472 KIF5AQ12840 1032 aa19.9■□□□□ 0.78
SYNE2-201ENST00000341472 NFATC2Q13469 925 aa19.9■□□□□ 0.78
SYNE2-201ENST00000341472 KIR2DS5Q14953 304 aa19.9■□□□□ 0.78
SYNE2-201ENST00000341472 ATP13A5Q4VNC0 1218 aa19.9■□□□□ 0.78
SYNE2-201ENST00000341472 TMEM164Q5U3C3 297 aa19.9■□□□□ 0.78
SYNE2-201ENST00000341472 TMEM71Q6P5X7 295 aa19.9■□□□□ 0.78
SYNE2-201ENST00000341472 CRTC3Q6UUV7 619 aa19.9■□□□□ 0.78
SYNE2-201ENST00000341472 ZNF761Q86XN6 746 aaPredicted RBP19.9■□□□□ 0.78
SYNE2-201ENST00000341472 CDKL3Q8IVW4 592 aaPredicted RBP19.9■□□□□ 0.78
SYNE2-201ENST00000341472 TXLNBQ8N3L3 684 aa19.9■□□□□ 0.78
SYNE2-201ENST00000341472 LRRC57Q8N9N7 239 aa19.9■□□□□ 0.78
SYNE2-201ENST00000341472 GDAP1Q8TB36 358 aa19.9■□□□□ 0.78
SYNE2-201ENST00000341472 DTX3LQ8TDB6 740 aa19.9■□□□□ 0.78
SYNE2-201ENST00000341472 BLOC1S5Q8TDH9 187 aa19.9■□□□□ 0.78
SYNE2-201ENST00000341472 CCDC74BQ96LY2 380 aa19.9■□□□□ 0.78
SYNE2-201ENST00000341472 GRPEL1Q9HAV7 217 aa19.9■□□□□ 0.78
SYNE2-201ENST00000341472 PRDM8Q9NQV8 689 aa19.9■□□□□ 0.78
SYNE2-201ENST00000341472 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.9■□□□□ 0.78
SYNE2-201ENST00000341472 IL17CQ9P0M4 197 aa19.9■□□□□ 0.78
SYNE2-201ENST00000341472 IMPACTQ9P2X3 320 aa19.9■□□□□ 0.78
SYNE2-201ENST00000341472 SLC23A2Q9UGH3 650 aa19.9■□□□□ 0.78
SYNE2-201ENST00000341472 AMFRQ9UKV5 643 aa19.9■□□□□ 0.78
SYNE2-201ENST00000341472 TMPRSS11EQ9UL52 423 aa19.9■□□□□ 0.78
SYNE2-201ENST00000341472 MTX2O75431 263 aa19.89■□□□□ 0.77
SYNE2-201ENST00000341472 STK10O94804 968 aaKnown RBP19.89■□□□□ 0.77
SYNE2-201ENST00000341472 AGTP01019 485 aa19.89■□□□□ 0.77
SYNE2-201ENST00000341472 RBP3P10745 1247 aa19.89■□□□□ 0.77
SYNE2-201ENST00000341472 CCL4P13236 92 aa19.89■□□□□ 0.77
SYNE2-201ENST00000341472 ZNF7P17097 686 aaPredicted RBP19.89■□□□□ 0.77
SYNE2-201ENST00000341472 MPSTP25325 297 aa19.89■□□□□ 0.77
SYNE2-201ENST00000341472 TMEM115Q12893 351 aaPredicted RBP19.89■□□□□ 0.77
SYNE2-201ENST00000341472 PRPSAP1Q14558 356 aa19.89■□□□□ 0.77
SYNE2-201ENST00000341472 LRRTM4Q86VH4 590 aa19.89■□□□□ 0.77
SYNE2-201ENST00000341472 AVL9Q8NBF6 648 aa19.89■□□□□ 0.77
SYNE2-201ENST00000341472 RCBTB1Q8NDN9 531 aa19.89■□□□□ 0.77
SYNE2-201ENST00000341472 BRSK1Q8TDC3 778 aa19.89■□□□□ 0.77
SYNE2-201ENST00000341472 ALG3Q92685 438 aa19.89■□□□□ 0.77
SYNE2-201ENST00000341472 VPS35Q96QK1 796 aa19.89■□□□□ 0.77
SYNE2-201ENST00000341472 FSD1LQ9BXM9 530 aa19.89■□□□□ 0.77
SYNE2-201ENST00000341472 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.89■□□□□ 0.77
SYNE2-201ENST00000341472 GBA3Q9H227 469 aa19.89■□□□□ 0.77
SYNE2-201ENST00000341472 OSGEPL1Q9H4B0 414 aa19.89■□□□□ 0.77
SYNE2-201ENST00000341472 CPNE7Q9UBL6 633 aa19.89■□□□□ 0.77
SYNE2-201ENST00000341472 ACSL6Q9UKU0 697 aa19.89■□□□□ 0.77
SYNE2-201ENST00000341472 PKP3Q9Y446 797 aa19.89■□□□□ 0.77
SYNE2-201ENST00000341472 AHCTF1Q8WYP5 2266 aa19.88■□□□□ 0.77
SYNE2-201ENST00000341472 LRP4O75096 1905 aa19.88■□□□□ 0.77
SYNE2-201ENST00000341472 PRAMEF33A0A0G2JMD5 474 aa19.88■□□□□ 0.77
SYNE2-201ENST00000341472 KCNN4O15554 427 aa19.88■□□□□ 0.77
SYNE2-201ENST00000341472 PRAMEF10O60809 474 aa19.88■□□□□ 0.77
SYNE2-201ENST00000341472 CSTF2P33240 577 aaKnown RBP eCLIP19.88■□□□□ 0.77
SYNE2-201ENST00000341472 SPAM1P38567 509 aa19.88■□□□□ 0.77
SYNE2-201ENST00000341472 GTF2H3Q13889 308 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms