RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 CTSL3PQ5NE16 218 aa17.19■□□□□ 0.34
CLDN4-201ENST00000340958 IER5LQ5T953 404 aa17.19■□□□□ 0.34
CLDN4-201ENST00000340958 ATG16L1Q676U5 607 aa17.19■□□□□ 0.34
CLDN4-201ENST00000340958 LRRC8EQ6NSJ5 796 aa17.19■□□□□ 0.34
CLDN4-201ENST00000340958 KIAA1211LQ6NV74 962 aa17.19■□□□□ 0.34
CLDN4-201ENST00000340958 FAM47EQ6ZV65 393 aa17.19■□□□□ 0.34
CLDN4-201ENST00000340958 NRSN1Q8IZ57 195 aa17.19■□□□□ 0.34
CLDN4-201ENST00000340958 CENPLQ8N0S6 344 aaPredicted RBP17.19■□□□□ 0.34
CLDN4-201ENST00000340958 TRAM1L1Q8N609 369 aa17.19■□□□□ 0.34
CLDN4-201ENST00000340958 RPLP0P6Q8NHW5 317 aa17.19■□□□□ 0.34
CLDN4-201ENST00000340958 HEXDCQ8WVB3 486 aa17.19■□□□□ 0.34
CLDN4-201ENST00000340958 ZNF317Q96PQ6 595 aaPredicted RBP17.19■□□□□ 0.34
CLDN4-201ENST00000340958 GPR21Q99679 349 aa17.19■□□□□ 0.34
CLDN4-201ENST00000340958 PITPNM3Q9BZ71 974 aa17.19■□□□□ 0.34
CLDN4-201ENST00000340958 FGFR1OP2Q9NVK5 253 aa17.19■□□□□ 0.34
CLDN4-201ENST00000340958 ZDHHC3Q9NYG2 299 aa17.19■□□□□ 0.34
CLDN4-201ENST00000340958 COQ6Q9Y2Z9 468 aa17.19■□□□□ 0.34
CLDN4-201ENST00000340958 COL4A2P08572 1712 aa17.18■□□□□ 0.34
CLDN4-201ENST00000340958 TRBV5-4A0A0C4DH59 114 aa17.18■□□□□ 0.34
CLDN4-201ENST00000340958 A0A1W2PP55 124 aa17.18■□□□□ 0.34
CLDN4-201ENST00000340958 H3BMM5 538 aa17.18■□□□□ 0.34
CLDN4-201ENST00000340958 AREL1O15033 823 aa17.18■□□□□ 0.34
CLDN4-201ENST00000340958 GPR37L1O60883 481 aa17.18■□□□□ 0.34
CLDN4-201ENST00000340958 PCDH8O95206 1070 aa17.18■□□□□ 0.34
CLDN4-201ENST00000340958 MYL2P10916 166 aa17.18■□□□□ 0.34
CLDN4-201ENST00000340958 C6P13671 934 aa17.18■□□□□ 0.34
CLDN4-201ENST00000340958 CD72P21854 359 aa17.18■□□□□ 0.34
CLDN4-201ENST00000340958 SLC26A3P40879 764 aa17.18■□□□□ 0.34
CLDN4-201ENST00000340958 SKIV2L2P42285 1042 aaKnown RBP17.18■□□□□ 0.34
CLDN4-201ENST00000340958 NSG1P42857 185 aa17.18■□□□□ 0.34
CLDN4-201ENST00000340958 CSRP3P50461 194 aa17.18■□□□□ 0.34
CLDN4-201ENST00000340958 ITIH4Q14624 930 aa17.18■□□□□ 0.34
CLDN4-201ENST00000340958 FSTL5Q8N475 847 aaPredicted RBP17.18■□□□□ 0.34
CLDN4-201ENST00000340958 KCNJ9Q92806 393 aa17.18■□□□□ 0.34
CLDN4-201ENST00000340958 P2RY12Q9H244 342 aa17.18■□□□□ 0.34
CLDN4-201ENST00000340958 FBRSQ9HAH7 460 aa17.18■□□□□ 0.34
CLDN4-201ENST00000340958 SLC2A4RGQ9NR83 387 aa17.18■□□□□ 0.34
CLDN4-201ENST00000340958 COPG2Q9UBF2 871 aa17.18■□□□□ 0.34
CLDN4-201ENST00000340958 IQCF5A8MTL0 148 aa17.17■□□□□ 0.34
CLDN4-201ENST00000340958 CFAP99D6REC4 459 aa17.17■□□□□ 0.34
CLDN4-201ENST00000340958 MAN2B1O00754 1011 aa17.17■□□□□ 0.34
CLDN4-201ENST00000340958 TRIM16O95361 564 aa17.17■□□□□ 0.34
CLDN4-201ENST00000340958 RALBP11234 206 aa17.17■□□□□ 0.34
CLDN4-201ENST00000340958 ITGB6P18564 788 aa17.17■□□□□ 0.34
CLDN4-201ENST00000340958 RPS3P23396 243 aaKnown RBP eCLIP17.17■□□□□ 0.344e-7■■■■□ 19.4
CLDN4-201ENST00000340958 ALDH3A1P30838 453 aa17.17■□□□□ 0.34
CLDN4-201ENST00000340958 RPS14P62263 151 aaKnown RBP17.17■□□□□ 0.34
CLDN4-201ENST00000340958 TMEM52BQ4KMG9 183 aa17.17■□□□□ 0.34
CLDN4-201ENST00000340958 TMEM31Q5JXX7 168 aa17.17■□□□□ 0.34
CLDN4-201ENST00000340958 EOGTQ5NDL2 527 aa17.17■□□□□ 0.34
CLDN4-201ENST00000340958 TECPR1Q7Z6L1 1165 aa17.17■□□□□ 0.34
CLDN4-201ENST00000340958 TMPRSS6Q8IU80 811 aa17.17■□□□□ 0.34
CLDN4-201ENST00000340958 AADATQ8N5Z0 425 aa17.17■□□□□ 0.34
CLDN4-201ENST00000340958 CLDN19Q8N6F1 224 aa17.17■□□□□ 0.34
CLDN4-201ENST00000340958 SIDT2Q8NBJ9 832 aaKnown RBP17.17■□□□□ 0.34
CLDN4-201ENST00000340958 NUS1Q96E22 293 aa17.17■□□□□ 0.34
CLDN4-201ENST00000340958 IGSF5Q9NSI5 407 aa17.17■□□□□ 0.34
CLDN4-201ENST00000340958 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.17■□□□□ 0.34
CLDN4-201ENST00000340958 XPR1Q9UBH6 696 aa17.17■□□□□ 0.34
CLDN4-201ENST00000340958 FBXL21Q9UKT6 434 aa17.17■□□□□ 0.34
CLDN4-201ENST00000340958 FADS3Q9Y5Q0 445 aa17.17■□□□□ 0.34
CLDN4-201ENST00000340958 ZDBF2Q9HCK1 2354 aa17.17■□□□□ 0.34
CLDN4-201ENST00000340958 ADAM23O75077 832 aa17.17■□□□□ 0.34
CLDN4-201ENST00000340958 RECQL5O94762 991 aaPredicted RBP17.17■□□□□ 0.34
CLDN4-201ENST00000340958 PDGFBP01127 241 aaPredicted RBP17.17■□□□□ 0.34
CLDN4-201ENST00000340958 RBP1P09455 135 aa17.17■□□□□ 0.34
CLDN4-201ENST00000340958 ZNF37AP17032 561 aaPredicted RBP17.17■□□□□ 0.34
CLDN4-201ENST00000340958 MSH3P20585 1137 aa17.17■□□□□ 0.34
CLDN4-201ENST00000340958 DRD4P21917 467 aa17.17■□□□□ 0.34
CLDN4-201ENST00000340958 CA5AP35218 305 aa17.17■□□□□ 0.34
CLDN4-201ENST00000340958 DLG1Q12959 904 aa17.17■□□□□ 0.34
CLDN4-201ENST00000340958 ACAP2Q15057 778 aa17.17■□□□□ 0.34
CLDN4-201ENST00000340958 GPRC6AQ5T6X5 926 aa17.17■□□□□ 0.34
CLDN4-201ENST00000340958 PIP5KL1Q5T9C9 394 aa17.17■□□□□ 0.34
CLDN4-201ENST00000340958 PAQR3Q6TCH7 311 aa17.17■□□□□ 0.34
CLDN4-201ENST00000340958 ZNF852Q6ZMS4 543 aa17.17■□□□□ 0.34
CLDN4-201ENST00000340958 C10orf107Q8IVU9 208 aa17.17■□□□□ 0.34
CLDN4-201ENST00000340958 RDH11Q8TC12 318 aa17.17■□□□□ 0.34
CLDN4-201ENST00000340958 ZNF473Q8WTR7 871 aaKnown RBP17.17■□□□□ 0.34
CLDN4-201ENST00000340958 NAT14Q8WUY8 206 aa17.17■□□□□ 0.34
CLDN4-201ENST00000340958 ANKRD49Q8WVL7 239 aa17.17■□□□□ 0.34
CLDN4-201ENST00000340958 DTD2Q96FN9 168 aa17.17■□□□□ 0.34
CLDN4-201ENST00000340958 COQ10AQ96MF6 247 aa17.17■□□□□ 0.34
CLDN4-201ENST00000340958 MRPL57Q9BQC6 102 aaKnown RBP17.17■□□□□ 0.34
CLDN4-201ENST00000340958 MRPL46Q9H2W6 279 aaKnown RBP17.17■□□□□ 0.34
CLDN4-201ENST00000340958 FBXL12Q9NXK8 326 aa17.17■□□□□ 0.34
CLDN4-201ENST00000340958 TK2O00142 265 aa17.16■□□□□ 0.34
CLDN4-201ENST00000340958 SPINT1O43278 529 aa17.16■□□□□ 0.34
CLDN4-201ENST00000340958 TSPAN6O43657 245 aa17.16■□□□□ 0.34
CLDN4-201ENST00000340958 ACADMP11310 421 aa17.16■□□□□ 0.34
CLDN4-201ENST00000340958 DRD3P35462 400 aa17.16■□□□□ 0.34
CLDN4-201ENST00000340958 COPAP53621 1224 aa17.16■□□□□ 0.34
CLDN4-201ENST00000340958 SF3A3Q12874 501 aaKnown RBP eCLIP17.16■□□□□ 0.34
CLDN4-201ENST00000340958 MLF2Q15773 248 aaPredicted RBP17.16■□□□□ 0.34
CLDN4-201ENST00000340958 TTC31Q49AM3 519 aaPredicted RBP17.16■□□□□ 0.34
CLDN4-201ENST00000340958 HENMT1Q5T8I9 393 aaKnown RBP17.16■□□□□ 0.34
CLDN4-201ENST00000340958 GKAP1Q5VSY0 366 aaPredicted RBP17.16■□□□□ 0.34
CLDN4-201ENST00000340958 RAET1GQ6H3X3 334 aa17.16■□□□□ 0.34
CLDN4-201ENST00000340958 TMEM207Q6UWW9 146 aa17.16■□□□□ 0.34
CLDN4-201ENST00000340958 RGS9BPQ6ZS82 235 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms