RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 SLC30A3Q99726 388 aa16.2■□□□□ 0.18
LITAF-201ENST00000339430 MAGEH1Q9H213 219 aa16.2■□□□□ 0.18
LITAF-201ENST00000339430 TFB2MQ9H5Q4 396 aaKnown RBP16.2■□□□□ 0.18
LITAF-201ENST00000339430 CERS4Q9HA82 394 aa16.2■□□□□ 0.18
LITAF-201ENST00000339430 SCUBE2Q9NQ36 999 aa16.2■□□□□ 0.18
LITAF-201ENST00000339430 CD300AQ9UGN4 299 aa16.2■□□□□ 0.18
LITAF-201ENST00000339430 SNX13Q9Y5W8 968 aa16.2■□□□□ 0.18
LITAF-201ENST00000339430 NPEPPSL1A6NEC2 478 aa16.19■□□□□ 0.18
LITAF-201ENST00000339430 INSIG1O15503 277 aa16.19■□□□□ 0.18
LITAF-201ENST00000339430 ECI2O75521 394 aa16.19■□□□□ 0.18
LITAF-201ENST00000339430 OR6B1O95007 311 aa16.19■□□□□ 0.18
LITAF-201ENST00000339430 C8BP07358 591 aa16.19■□□□□ 0.18
LITAF-201ENST00000339430 RHDQ02161 417 aa16.19■□□□□ 0.18
LITAF-201ENST00000339430 UBE3AQ05086 875 aa16.19■□□□□ 0.18
LITAF-201ENST00000339430 CLCQ05315 142 aa16.19■□□□□ 0.18
LITAF-201ENST00000339430 AMIGO2Q86SJ2 522 aa16.19■□□□□ 0.18
LITAF-201ENST00000339430 GALNT15Q8N3T1 639 aa16.19■□□□□ 0.18
LITAF-201ENST00000339430 PDZD8Q8NEN9 1154 aa16.19■□□□□ 0.18
LITAF-201ENST00000339430 RHEBL1Q8TAI7 183 aa16.19■□□□□ 0.18
LITAF-201ENST00000339430 ESAMQ96AP7 390 aa16.19■□□□□ 0.18
LITAF-201ENST00000339430 TRIM8Q9BZR9 551 aa16.19■□□□□ 0.18
LITAF-201ENST00000339430 TRIM4Q9C037 500 aa16.19■□□□□ 0.18
LITAF-201ENST00000339430 MRPL40Q9NQ50 206 aaKnown RBP16.19■□□□□ 0.18
LITAF-201ENST00000339430 TAS2R13Q9NYV9 303 aa16.19■□□□□ 0.18
LITAF-201ENST00000339430 TBC1D30Q9Y2I9 924 aa16.19■□□□□ 0.18
LITAF-201ENST00000339430 ZNF839A8K0R7 811 aa16.19■□□□□ 0.18
LITAF-201ENST00000339430 H3BNC9 293 aa16.19■□□□□ 0.18
LITAF-201ENST00000339430 OR1I1O60431 355 aa16.19■□□□□ 0.18
LITAF-201ENST00000339430 CRCPO75575 148 aa16.19■□□□□ 0.18
LITAF-201ENST00000339430 GLUD1P00367 558 aa16.19■□□□□ 0.18
LITAF-201ENST00000339430 RB1P06400 928 aa16.19■□□□□ 0.18
LITAF-201ENST00000339430 CHRM3P20309 590 aa16.19■□□□□ 0.18
LITAF-201ENST00000339430 AGTR2P50052 363 aa16.19■□□□□ 0.18
LITAF-201ENST00000339430 YBX1P67809 324 aaKnown RBP16.19■□□□□ 0.18
LITAF-201ENST00000339430 CAPRIN1Q14444 709 aaKnown RBP16.19■□□□□ 0.18
LITAF-201ENST00000339430 PTPRNQ16849 979 aa16.19■□□□□ 0.18
LITAF-201ENST00000339430 MAP7D1Q3KQU3 841 aa16.19■□□□□ 0.18
LITAF-201ENST00000339430 KANK2Q63ZY3 851 aa16.19■□□□□ 0.18
LITAF-201ENST00000339430 ALG1LQ6GMV1 187 aa16.19■□□□□ 0.18
LITAF-201ENST00000339430 PSAPL1Q6NUJ1 521 aa16.19■□□□□ 0.18
LITAF-201ENST00000339430 SCIMPQ6UWF3 145 aa16.19■□□□□ 0.18
LITAF-201ENST00000339430 KREMEN2Q8NCW0 462 aa16.19■□□□□ 0.18
LITAF-201ENST00000339430 STAG3L4Q8TBR4 150 aa16.19■□□□□ 0.18
LITAF-201ENST00000339430 KIAA1191Q96A73 305 aa16.19■□□□□ 0.18
LITAF-201ENST00000339430 TRMT2BQ96GJ1 504 aaKnown RBP16.19■□□□□ 0.18
LITAF-201ENST00000339430 COQ10BQ9H8M1 238 aa16.19■□□□□ 0.18
LITAF-201ENST00000339430 POPDC3Q9HBV1 291 aa16.19■□□□□ 0.18
LITAF-201ENST00000339430 INTS10Q9NVR2 710 aaKnown RBP16.19■□□□□ 0.18
LITAF-201ENST00000339430 TRPM5Q9NZQ8 1165 aa16.19■□□□□ 0.18
LITAF-201ENST00000339430 MAP10Q9P2G4 905 aa16.19■□□□□ 0.18
LITAF-201ENST00000339430 POLG2Q9UHN1 485 aa16.19■□□□□ 0.18
LITAF-201ENST00000339430 TSR3Q9UJK0 312 aaKnown RBP16.19■□□□□ 0.18
LITAF-201ENST00000339430 BTN3A1O00481 513 aa16.18■□□□□ 0.18
LITAF-201ENST00000339430 KERAO60938 352 aa16.18■□□□□ 0.18
LITAF-201ENST00000339430 NIPSNAP2O75323 286 aa16.18■□□□□ 0.18
LITAF-201ENST00000339430 PRLP01236 227 aa16.18■□□□□ 0.18
LITAF-201ENST00000339430 KLKB1P03952 638 aa16.18■□□□□ 0.18
LITAF-201ENST00000339430 C8AP07357 584 aa16.18■□□□□ 0.18
LITAF-201ENST00000339430 RHOCP08134 193 aa16.18■□□□□ 0.18
LITAF-201ENST00000339430 FGF4P08620 206 aa16.18■□□□□ 0.18
LITAF-201ENST00000339430 HGFP14210 728 aa16.18■□□□□ 0.18
LITAF-201ENST00000339430 CAPN3P20807 821 aa16.18■□□□□ 0.18
LITAF-201ENST00000339430 PRDX3P30048 256 aaKnown RBP16.18■□□□□ 0.18
LITAF-201ENST00000339430 SLC11A2P49281 568 aa16.18■□□□□ 0.18
LITAF-201ENST00000339430 ACADVLP49748 655 aa16.18■□□□□ 0.18
LITAF-201ENST00000339430 ATP4BP51164 291 aa16.18■□□□□ 0.18
LITAF-201ENST00000339430 KPNA1P52294 538 aaPredicted RBP16.18■□□□□ 0.18
LITAF-201ENST00000339430 MYBPC1Q00872 1141 aa16.18■□□□□ 0.18
LITAF-201ENST00000339430 RAD51Q06609 339 aa16.18■□□□□ 0.18
LITAF-201ENST00000339430 MTX3Q5HYI7 312 aa16.18■□□□□ 0.18
LITAF-201ENST00000339430 SAMD4BQ5PRF9 694 aaKnown RBP16.18■□□□□ 0.18
LITAF-201ENST00000339430 C8orf82Q6P1X6 216 aaPredicted RBP16.18■□□□□ 0.18
LITAF-201ENST00000339430 AFTPHQ6ULP2 937 aa16.18■□□□□ 0.18
LITAF-201ENST00000339430 LINGO4Q6UY18 593 aa16.18■□□□□ 0.18
LITAF-201ENST00000339430 PHYKPLQ8IUZ5 450 aa16.18■□□□□ 0.18
LITAF-201ENST00000339430 PIANPQ8IYJ0 282 aa16.18■□□□□ 0.18
LITAF-201ENST00000339430 MIER2Q8N344 545 aa16.18■□□□□ 0.18
LITAF-201ENST00000339430 PIP4K2CQ8TBX8 421 aa16.18■□□□□ 0.18
LITAF-201ENST00000339430 OVCA2Q8WZ82 227 aa16.18■□□□□ 0.18
LITAF-201ENST00000339430 SYTL2Q9HCH5 934 aa16.18■□□□□ 0.18
LITAF-201ENST00000339430 FKBPLQ9UIM3 349 aa16.18■□□□□ 0.18
LITAF-201ENST00000339430 GPR39O43194 453 aa16.18■□□□□ 0.18
LITAF-201ENST00000339430 KDELR3O43731 214 aa16.18■□□□□ 0.18
LITAF-201ENST00000339430 ATP6V1B1P15313 513 aa16.18■□□□□ 0.18
LITAF-201ENST00000339430 HOXB8P17481 243 aaPredicted RBP16.18■□□□□ 0.18
LITAF-201ENST00000339430 GRIA3P42263 894 aa16.18■□□□□ 0.18
LITAF-201ENST00000339430 CDH4P55283 916 aa16.18■□□□□ 0.18
LITAF-201ENST00000339430 RPS6KA2Q15349 733 aa16.18■□□□□ 0.18
LITAF-201ENST00000339430 CYTH1Q15438 398 aa16.18■□□□□ 0.18
LITAF-201ENST00000339430 SIDT2Q8NBJ9 832 aaKnown RBP16.18■□□□□ 0.18
LITAF-201ENST00000339430 PCYOX1LQ8NBM8 494 aa16.18■□□□□ 0.18
LITAF-201ENST00000339430 PPWD1Q96BP3 646 aaKnown RBP16.18■□□□□ 0.18
LITAF-201ENST00000339430 ASB2Q96Q27 587 aa16.18■□□□□ 0.18
LITAF-201ENST00000339430 TDRD1Q9BXT4 1180 aaKnown RBP16.18■□□□□ 0.18
LITAF-201ENST00000339430 AGO1Q9UL18 857 aaKnown RBP16.18■□□□□ 0.18
LITAF-201ENST00000339430 C2orf81A6NN90 581 aa16.17■□□□□ 0.18
LITAF-201ENST00000339430 NME4O00746 187 aa16.17■□□□□ 0.18
LITAF-201ENST00000339430 COCHO43405 550 aa16.17■□□□□ 0.18
LITAF-201ENST00000339430 TIPRLO75663 272 aa16.17■□□□□ 0.18
LITAF-201ENST00000339430 LRG1P02750 347 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms