RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 DDX56Q9NY93 547 aaKnown RBP19.2■□□□□ 0.66
ITGA4-202ENST00000339307 A0A0A6YYK5 440 aaPredicted RBP19.19■□□□□ 0.66
ITGA4-202ENST00000339307 PDZK1P1A8MUH7 402 aa19.19■□□□□ 0.66
ITGA4-202ENST00000339307 ZNF487B1APH4 448 aa19.19■□□□□ 0.66
ITGA4-202ENST00000339307 B4E171 279 aa19.19■□□□□ 0.66
ITGA4-202ENST00000339307 RAD1O60671 282 aa19.19■□□□□ 0.66
ITGA4-202ENST00000339307 MTX2O75431 263 aa19.19■□□□□ 0.66
ITGA4-202ENST00000339307 TSPAN7P41732 249 aa19.19■□□□□ 0.66
ITGA4-202ENST00000339307 TNNT3P45378 269 aaPredicted RBP19.19■□□□□ 0.66
ITGA4-202ENST00000339307 NOP2P46087 812 aaKnown RBP19.19■□□□□ 0.66
ITGA4-202ENST00000339307 XKR5Q6UX68 686 aa19.19■□□□□ 0.66
ITGA4-202ENST00000339307 TMC3Q7Z5M5 1100 aa19.19■□□□□ 0.66
ITGA4-202ENST00000339307 VSTM4Q8IW00 320 aa19.19■□□□□ 0.66
ITGA4-202ENST00000339307 TRAM1L1Q8N609 369 aa19.19■□□□□ 0.66
ITGA4-202ENST00000339307 HTR3CQ8WXA8 447 aa19.19■□□□□ 0.66
ITGA4-202ENST00000339307 GLYATL1Q969I3 302 aa19.19■□□□□ 0.66
ITGA4-202ENST00000339307 TRIB3Q96RU7 358 aa19.19■□□□□ 0.66
ITGA4-202ENST00000339307 GLOD4Q9HC38 313 aa19.19■□□□□ 0.66
ITGA4-202ENST00000339307 SAE1Q9UBE0 346 aaPredicted RBP19.19■□□□□ 0.66
ITGA4-202ENST00000339307 SDK2Q58EX2 2172 aa19.19■□□□□ 0.66
ITGA4-202ENST00000339307 COL6A6A6NMZ7 2263 aa19.19■□□□□ 0.66
ITGA4-202ENST00000339307 OR5K4A6NMS3 321 aa19.18■□□□□ 0.66
ITGA4-202ENST00000339307 F5H423 210 aaPredicted RBP19.18■□□□□ 0.66
ITGA4-202ENST00000339307 MFAP3LO75121 409 aa19.18■□□□□ 0.66
ITGA4-202ENST00000339307 VIPP01282 170 aa19.18■□□□□ 0.66
ITGA4-202ENST00000339307 LIFP15018 202 aa19.18■□□□□ 0.66
ITGA4-202ENST00000339307 COMTP21964 271 aa19.18■□□□□ 0.66
ITGA4-202ENST00000339307 SLC1A1P43005 524 aa19.18■□□□□ 0.66
ITGA4-202ENST00000339307 NFKB2Q00653 900 aa19.18■□□□□ 0.66
ITGA4-202ENST00000339307 MFSD7Q6UXD7 560 aa19.18■□□□□ 0.66
ITGA4-202ENST00000339307 BZW1Q7L1Q6 419 aaKnown RBP19.18■□□□□ 0.66
ITGA4-202ENST00000339307 ADGRG6Q86SQ4 1221 aa19.18■□□□□ 0.66
ITGA4-202ENST00000339307 RNF214Q8ND24 703 aa19.18■□□□□ 0.66
ITGA4-202ENST00000339307 PLEKHG4BQ96PX9 1271 aa19.18■□□□□ 0.66
ITGA4-202ENST00000339307 TRIM10Q9UDY6 481 aa19.18■□□□□ 0.66
ITGA4-202ENST00000339307 HELZ2Q9BYK8 2649 aaKnown RBP19.18■□□□□ 0.66
ITGA4-202ENST00000339307 KMOO15229 486 aa19.17■□□□□ 0.66
ITGA4-202ENST00000339307 NDST3O95803 873 aa19.17■□□□□ 0.66
ITGA4-202ENST00000339307 SFTPCP11686 197 aa19.17■□□□□ 0.66
ITGA4-202ENST00000339307 BPIP17213 487 aa19.17■□□□□ 0.66
ITGA4-202ENST00000339307 TYRP1P17643 537 aa19.17■□□□□ 0.66
ITGA4-202ENST00000339307 AMD1P17707 334 aa19.17■□□□□ 0.66
ITGA4-202ENST00000339307 EPHA4P54764 986 aa19.17■□□□□ 0.66
ITGA4-202ENST00000339307 TEX44Q53QW1 395 aa19.17■□□□□ 0.66
ITGA4-202ENST00000339307 LRRC38Q5VT99 294 aa19.17■□□□□ 0.66
ITGA4-202ENST00000339307 CEACAM20Q6UY09 585 aa19.17■□□□□ 0.66
ITGA4-202ENST00000339307 LRRTM4Q86VH4 590 aa19.17■□□□□ 0.66
ITGA4-202ENST00000339307 VSIG1Q86XK7 387 aa19.17■□□□□ 0.66
ITGA4-202ENST00000339307 PLXDC1Q8IUK5 500 aa19.17■□□□□ 0.66
ITGA4-202ENST00000339307 AVL9Q8NBF6 648 aa19.17■□□□□ 0.66
ITGA4-202ENST00000339307 TFB1MQ8WVM0 346 aaKnown RBP19.17■□□□□ 0.66
ITGA4-202ENST00000339307 KIAA1143Q96AT1 154 aaPredicted RBP19.17■□□□□ 0.66
ITGA4-202ENST00000339307 OLFM3Q96PB7 478 aa19.17■□□□□ 0.66
ITGA4-202ENST00000339307 TEFMQ96QE5 360 aaKnown RBP19.17■□□□□ 0.66
ITGA4-202ENST00000339307 TRIM4Q9C037 500 aa19.17■□□□□ 0.66
ITGA4-202ENST00000339307 PDP2Q9P2J9 529 aa19.17■□□□□ 0.66
ITGA4-202ENST00000339307 SLC23A2Q9UGH3 650 aa19.17■□□□□ 0.66
ITGA4-202ENST00000339307 A6NCN8 305 aa19.17■□□□□ 0.66
ITGA4-202ENST00000339307 CDK14O94921 469 aa19.17■□□□□ 0.66
ITGA4-202ENST00000339307 ZNF7P17097 686 aaPredicted RBP19.17■□□□□ 0.66
ITGA4-202ENST00000339307 PTPN3P26045 913 aa19.17■□□□□ 0.66
ITGA4-202ENST00000339307 RPL10P27635 214 aaKnown RBP19.17■□□□□ 0.66
ITGA4-202ENST00000339307 DCDC1P59894 354 aa19.17■□□□□ 0.66
ITGA4-202ENST00000339307 MC2RQ01718 297 aa19.17■□□□□ 0.66
ITGA4-202ENST00000339307 FOXM1Q08050 763 aa19.17■□□□□ 0.66
ITGA4-202ENST00000339307 GTF2H3Q13889 308 aa19.17■□□□□ 0.66
ITGA4-202ENST00000339307 TFDP2Q14188 446 aa19.17■□□□□ 0.66
ITGA4-202ENST00000339307 ARHGAP22Q7Z5H3 698 aa19.17■□□□□ 0.66
ITGA4-202ENST00000339307 NLGN4XQ8N0W4 816 aa19.17■□□□□ 0.66
ITGA4-202ENST00000339307 SLC25A41Q8N5S1 370 aa19.17■□□□□ 0.66
ITGA4-202ENST00000339307 NLGN4YQ8NFZ3 816 aaPredicted RBP19.17■□□□□ 0.66
ITGA4-202ENST00000339307 RTP4Q96DX8 246 aa19.17■□□□□ 0.66
ITGA4-202ENST00000339307 RNF31Q96EP0 1072 aa19.17■□□□□ 0.66
ITGA4-202ENST00000339307 TTC25Q96NG3 672 aa19.17■□□□□ 0.66
ITGA4-202ENST00000339307 SLC12A9Q9BXP2 914 aa19.17■□□□□ 0.66
ITGA4-202ENST00000339307 PIEZO2Q9H5I5 2752 aa19.17■□□□□ 0.66
ITGA4-202ENST00000339307 GPN2Q9H9Y4 310 aaPredicted RBP19.17■□□□□ 0.66
ITGA4-202ENST00000339307 APMAPQ9HDC9 416 aa19.17■□□□□ 0.66
ITGA4-202ENST00000339307 SCHIP1Q9P0W5 487 aaPredicted RBP19.17■□□□□ 0.66
ITGA4-202ENST00000339307 KLHL8Q9P2G9 620 aaPredicted RBP19.17■□□□□ 0.66
ITGA4-202ENST00000339307 SPO11Q9Y5K1 396 aa19.17■□□□□ 0.66
ITGA4-202ENST00000339307 GPR89AB7ZAQ6 455 aa19.16■□□□□ 0.66
ITGA4-202ENST00000339307 AURKAO14965 403 aa19.16■□□□□ 0.66
ITGA4-202ENST00000339307 POLR1CO15160 346 aaPredicted RBP19.16■□□□□ 0.66
ITGA4-202ENST00000339307 CST8O60676 142 aa19.16■□□□□ 0.66
ITGA4-202ENST00000339307 GPR89BP0CG08 455 aa19.16■□□□□ 0.66
ITGA4-202ENST00000339307 KCNC4Q03721 635 aa19.16■□□□□ 0.66
ITGA4-202ENST00000339307 CLCA4Q14CN2 919 aa19.16■□□□□ 0.66
ITGA4-202ENST00000339307 PDPK2PQ6A1A2 396 aa19.16■□□□□ 0.66
ITGA4-202ENST00000339307 BORAQ6PGQ7 559 aa19.16■□□□□ 0.66
ITGA4-202ENST00000339307 ZC3H18Q86VM9 953 aaKnown RBP19.16■□□□□ 0.66
ITGA4-202ENST00000339307 TRAPPC5Q8IUR0 188 aa19.16■□□□□ 0.66
ITGA4-202ENST00000339307 CCDC50Q8IVM0 306 aa19.16■□□□□ 0.66
ITGA4-202ENST00000339307 UNC5BQ8IZJ1 945 aa19.16■□□□□ 0.66
ITGA4-202ENST00000339307 BMPERQ8N8U9 685 aa19.16■□□□□ 0.66
ITGA4-202ENST00000339307 HAUS1Q96CS2 278 aa19.16■□□□□ 0.66
ITGA4-202ENST00000339307 TEKT5Q96M29 485 aa19.16■□□□□ 0.66
ITGA4-202ENST00000339307 TGM7Q96PF1 710 aa19.16■□□□□ 0.66
ITGA4-202ENST00000339307 SRPK1Q96SB4 655 aaKnown RBP19.16■□□□□ 0.66
ITGA4-202ENST00000339307 EPB41L1Q9H4G0 881 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms