RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 FCGR1AP12314 374 aa10.72□□□□□ -0.69
RTN3-201ENST00000338850 CD1DP15813 335 aa10.72□□□□□ -0.69
RTN3-201ENST00000338850 ZNF23P17027 643 aa10.72□□□□□ -0.69
RTN3-201ENST00000338850 PSMC3P17980 439 aa10.72□□□□□ -0.69
RTN3-201ENST00000338850 CES1P23141 567 aa10.72□□□□□ -0.69
RTN3-201ENST00000338850 AVPR1AP37288 418 aa10.72□□□□□ -0.69
RTN3-201ENST00000338850 NBL1P41271 181 aa10.72□□□□□ -0.69
RTN3-201ENST00000338850 ALDH3B2P48448 385 aa10.72□□□□□ -0.69
RTN3-201ENST00000338850 KPNA1P52294 538 aaPredicted RBP10.72□□□□□ -0.69
RTN3-201ENST00000338850 ATP6V0D1P61421 351 aa10.72□□□□□ -0.69
RTN3-201ENST00000338850 MYBPC1Q00872 1141 aa10.72□□□□□ -0.69
RTN3-201ENST00000338850 UGT3A2Q3SY77 523 aa10.72□□□□□ -0.69
RTN3-201ENST00000338850 MGAT5BQ3V5L5 792 aa10.72□□□□□ -0.69
RTN3-201ENST00000338850 KCTD21Q4G0X4 260 aa10.72□□□□□ -0.69
RTN3-201ENST00000338850 UNC50Q53HI1 259 aa10.72□□□□□ -0.69
RTN3-201ENST00000338850 C6orf10Q5SRN2 563 aa10.72□□□□□ -0.69
RTN3-201ENST00000338850 PIK3R6Q5UE93 754 aa10.72□□□□□ -0.69
RTN3-201ENST00000338850 KANK2Q63ZY3 851 aa10.72□□□□□ -0.69
RTN3-201ENST00000338850 SLC8B1Q6J4K2 584 aa10.72□□□□□ -0.69
RTN3-201ENST00000338850 MRNIPQ6NTE8 343 aa10.72□□□□□ -0.69
RTN3-201ENST00000338850 PPP4R4Q6NUP7 873 aa10.72□□□□□ -0.69
RTN3-201ENST00000338850 PARM1Q6UWI2 310 aa10.72□□□□□ -0.69
RTN3-201ENST00000338850 B3GNT6Q6ZMB0 384 aa10.72□□□□□ -0.69
RTN3-201ENST00000338850 CYHR1Q6ZMK1 362 aa10.72□□□□□ -0.69
RTN3-201ENST00000338850 GK5Q6ZS86 529 aa10.72□□□□□ -0.69
RTN3-201ENST00000338850 FKBP9P1Q75LS8 142 aa10.72□□□□□ -0.69
RTN3-201ENST00000338850 RTL10Q7L3V2 364 aa10.72□□□□□ -0.69
RTN3-201ENST00000338850 ERMP1Q7Z2K6 904 aa10.72□□□□□ -0.69
RTN3-201ENST00000338850 ISCA2Q86U28 154 aa10.72□□□□□ -0.69
RTN3-201ENST00000338850 SPATA24Q86W54 205 aa10.72□□□□□ -0.69
RTN3-201ENST00000338850 DTWD2Q8NBA8 298 aa10.72□□□□□ -0.69
RTN3-201ENST00000338850 ITFG1Q8TB96 612 aa10.72□□□□□ -0.69
RTN3-201ENST00000338850 GPR152Q8TDT2 470 aa10.72□□□□□ -0.69
RTN3-201ENST00000338850 ADAMTS16Q8TE57 1224 aa10.72□□□□□ -0.69
RTN3-201ENST00000338850 LZICQ8WZA0 190 aa10.72□□□□□ -0.69
RTN3-201ENST00000338850 FGF13Q92913 245 aa10.72□□□□□ -0.69
RTN3-201ENST00000338850 FGF14Q92915 247 aa10.72□□□□□ -0.69
RTN3-201ENST00000338850 C19orf60Q96EN9 201 aa10.72□□□□□ -0.69
RTN3-201ENST00000338850 BTN2A3PQ96KV6 586 aa10.72□□□□□ -0.69
RTN3-201ENST00000338850 DDX50Q9BQ39 737 aaKnown RBP10.72□□□□□ -0.69
RTN3-201ENST00000338850 RPP25Q9BUL9 199 aaKnown RBP10.72□□□□□ -0.69
RTN3-201ENST00000338850 TRIM54Q9BYV2 358 aa10.72□□□□□ -0.69
RTN3-201ENST00000338850 ANKRD60Q9BZ19 345 aa10.72□□□□□ -0.69
RTN3-201ENST00000338850 COPS7BQ9H9Q2 264 aaPredicted RBP10.72□□□□□ -0.69
RTN3-201ENST00000338850 SP110Q9HB58 689 aa10.72□□□□□ -0.69
RTN3-201ENST00000338850 SYTL2Q9HCH5 934 aa10.72□□□□□ -0.69
RTN3-201ENST00000338850 SLC2A4RGQ9NR83 387 aa10.72□□□□□ -0.69
RTN3-201ENST00000338850 PNPLA3Q9NST1 481 aa10.72□□□□□ -0.69
RTN3-201ENST00000338850 HCFC1R1Q9NWW0 138 aa10.72□□□□□ -0.69
RTN3-201ENST00000338850 UBAP1Q9NZ09 502 aa10.72□□□□□ -0.69
RTN3-201ENST00000338850 CA14Q9ULX7 337 aa10.72□□□□□ -0.69
RTN3-201ENST00000338850 TIMM13Q9Y5L4 95 aaPredicted RBP10.72□□□□□ -0.69
RTN3-201ENST00000338850 KLHL33A6NCF5 533 aa10.71□□□□□ -0.69
RTN3-201ENST00000338850 E7ENX8 843 aa10.71□□□□□ -0.69
RTN3-201ENST00000338850 TXNDC9O14530 226 aa10.71□□□□□ -0.69
RTN3-201ENST00000338850 HNRNPRO43390 633 aaKnown RBP10.71□□□□□ -0.69
RTN3-201ENST00000338850 TBC1D4O60343 1298 aa10.71□□□□□ -0.69
RTN3-201ENST00000338850 KERAO60938 352 aa10.71□□□□□ -0.69
RTN3-201ENST00000338850 RNASEH2AO75792 299 aaKnown RBP10.71□□□□□ -0.69
RTN3-201ENST00000338850 RPP40O75818 363 aaKnown RBP10.71□□□□□ -0.69
RTN3-201ENST00000338850 TMCC1O94876 653 aa10.71□□□□□ -0.69
RTN3-201ENST00000338850 GPIP06744 558 aa10.71□□□□□ -0.69
RTN3-201ENST00000338850 UMPSP11172 480 aa10.71□□□□□ -0.69
RTN3-201ENST00000338850 ZNF37AP17032 561 aaPredicted RBP10.71□□□□□ -0.69
RTN3-201ENST00000338850 GPX3P22352 226 aa10.71□□□□□ -0.69
RTN3-201ENST00000338850 CCR10P46092 362 aa10.71□□□□□ -0.69
RTN3-201ENST00000338850 PKNOX1P55347 436 aa10.71□□□□□ -0.69
RTN3-201ENST00000338850 TBX4P57082 545 aa10.71□□□□□ -0.69
RTN3-201ENST00000338850 PRAMEP78395 509 aa10.71□□□□□ -0.69
RTN3-201ENST00000338850 YWHAHQ04917 246 aaPredicted RBP10.71□□□□□ -0.69
RTN3-201ENST00000338850 PDAP1Q13442 181 aaKnown RBP10.71□□□□□ -0.69
RTN3-201ENST00000338850 SERINC3Q13530 473 aa10.71□□□□□ -0.69
RTN3-201ENST00000338850 SEPT6Q14141 434 aa10.71□□□□□ -0.69
RTN3-201ENST00000338850 MRPL58Q14197 206 aaKnown RBP10.71□□□□□ -0.69
RTN3-201ENST00000338850 ZNF460Q14592 562 aa10.71□□□□□ -0.69
RTN3-201ENST00000338850 LRRC36Q1X8D7 754 aa10.71□□□□□ -0.69
RTN3-201ENST00000338850 VARS2Q5ST30 1063 aaKnown RBP10.71□□□□□ -0.69
RTN3-201ENST00000338850 TXNDC11Q6PKC3 985 aa10.71□□□□□ -0.69
RTN3-201ENST00000338850 RNF165Q6ZSG1 346 aa10.71□□□□□ -0.69
RTN3-201ENST00000338850 ASCL5Q7RTU5 278 aa10.71□□□□□ -0.69
RTN3-201ENST00000338850 SPATA19Q7Z5L4 167 aa10.71□□□□□ -0.69
RTN3-201ENST00000338850 LRRTM3Q86VH5 581 aa10.71□□□□□ -0.69
RTN3-201ENST00000338850 PTRH1Q86Y79 214 aaKnown RBP10.71□□□□□ -0.69
RTN3-201ENST00000338850 PHYKPLQ8IUZ5 450 aa10.71□□□□□ -0.69
RTN3-201ENST00000338850 HIPK4Q8NE63 616 aa10.71□□□□□ -0.69
RTN3-201ENST00000338850 OR2T34Q8NGX1 318 aa10.71□□□□□ -0.69
RTN3-201ENST00000338850 OR2T3Q8NH03 318 aa10.71□□□□□ -0.69
RTN3-201ENST00000338850 AGR3Q8TD06 166 aa10.71□□□□□ -0.69
RTN3-201ENST00000338850 BRSK1Q8TDC3 778 aa10.71□□□□□ -0.69
RTN3-201ENST00000338850 TMA16Q96EY4 203 aaKnown RBP10.71□□□□□ -0.69
RTN3-201ENST00000338850 ATOH8Q96SQ7 321 aa10.71□□□□□ -0.69
RTN3-201ENST00000338850 NPAS2Q99743 824 aa10.71□□□□□ -0.69
RTN3-201ENST00000338850 DERL2Q9GZP9 239 aa10.71□□□□□ -0.69
RTN3-201ENST00000338850 POLR1EQ9GZS1 481 aaKnown RBP10.71□□□□□ -0.69
RTN3-201ENST00000338850 SIK2Q9H0K1 926 aa10.71□□□□□ -0.69
RTN3-201ENST00000338850 TBC1D17Q9HA65 648 aa10.71□□□□□ -0.69
RTN3-201ENST00000338850 SDR39U1Q9NRG7 319 aaPredicted RBP10.71□□□□□ -0.69
RTN3-201ENST00000338850 CCM2LQ9NUG4 571 aaPredicted RBP10.71□□□□□ -0.69
RTN3-201ENST00000338850 POLR3BQ9NW08 1133 aaPredicted RBP10.71□□□□□ -0.69
RTN3-201ENST00000338850 ETAA1Q9NY74 926 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms