RNA–Protein interactions for RNA: ENST00000337138.8

HIF1A-202, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HIF1A, Length 3,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-202ENST00000337138 NHSL2Q5HYW2 709 aa10.04□□□□□ -0.8
HIF1A-202ENST00000337138 THOC7Q6I9Y2 204 aaKnown RBP10.04□□□□□ -0.8
HIF1A-202ENST00000337138 SNX29P2Q8IUI4 249 aa10.04□□□□□ -0.8
HIF1A-202ENST00000337138 FBXO39Q8N4B4 442 aa10.04□□□□□ -0.8
HIF1A-202ENST00000337138 PTERQ96BW5 349 aa10.04□□□□□ -0.8
HIF1A-202ENST00000337138 HMCESQ96FZ2 354 aa10.04□□□□□ -0.8
HIF1A-202ENST00000337138 MUC3BQ9H195 1237 aa10.04□□□□□ -0.8
HIF1A-202ENST00000337138 AGO3Q9H9G7 860 aaKnown RBP10.04□□□□□ -0.8
HIF1A-202ENST00000337138 TBC1D13Q9NVG8 400 aa10.04□□□□□ -0.8
HIF1A-202ENST00000337138 FAIMQ9NVQ4 179 aa10.04□□□□□ -0.8
HIF1A-202ENST00000337138 TMEM181Q9P2C4 612 aa10.04□□□□□ -0.8
HIF1A-202ENST00000337138 SUCOQ9UBS9 1254 aaKnown RBP10.04□□□□□ -0.8
HIF1A-202ENST00000337138 MOXD2PA6NHM9 499 aa10.04□□□□□ -0.8
HIF1A-202ENST00000337138 A8MX80 341 aa10.04□□□□□ -0.8
HIF1A-202ENST00000337138 ARPC2O15144 300 aa10.04□□□□□ -0.8
HIF1A-202ENST00000337138 NPHS1O60500 1241 aa10.04□□□□□ -0.8
HIF1A-202ENST00000337138 PCSK1P29120 753 aa10.04□□□□□ -0.8
HIF1A-202ENST00000337138 PRDX3P30048 256 aaKnown RBP10.04□□□□□ -0.8
HIF1A-202ENST00000337138 GPR15P49685 360 aa10.04□□□□□ -0.8
HIF1A-202ENST00000337138 TSNQ15631 228 aaKnown RBP10.04□□□□□ -0.8
HIF1A-202ENST00000337138 DCLRE1AQ6PJP8 1040 aa10.04□□□□□ -0.8
HIF1A-202ENST00000337138 SLC15A3Q8IY34 581 aa10.04□□□□□ -0.8
HIF1A-202ENST00000337138 CLYBLQ8N0X4 340 aa10.04□□□□□ -0.8
HIF1A-202ENST00000337138 PSMA8Q8TAA3 256 aa10.04□□□□□ -0.8
HIF1A-202ENST00000337138 CALML6Q8TD86 181 aa10.04□□□□□ -0.8
HIF1A-202ENST00000337138 TSPAN18Q96SJ8 248 aa10.04□□□□□ -0.8
HIF1A-202ENST00000337138 TINF2Q9BSI4 451 aa10.04□□□□□ -0.8
HIF1A-202ENST00000337138 MARCH7Q9H992 704 aa10.04□□□□□ -0.8
HIF1A-202ENST00000337138 FANCEQ9HB96 536 aa10.04□□□□□ -0.8
HIF1A-202ENST00000337138 VTA1Q9NP79 307 aa10.04□□□□□ -0.8
HIF1A-202ENST00000337138 ABCD2Q9UBJ2 740 aa10.04□□□□□ -0.8
HIF1A-202ENST00000337138 FAM8A1Q9UBU6 413 aa10.04□□□□□ -0.8
HIF1A-202ENST00000337138 ST3GAL5Q9UNP4 418 aa10.04□□□□□ -0.8
HIF1A-202ENST00000337138 SLC8A2Q9UPR5 921 aa10.04□□□□□ -0.8
HIF1A-202ENST00000337138 A0A1W2PQH9 124 aa10.04□□□□□ -0.8
HIF1A-202ENST00000337138 CCDC154A6NI56 674 aa10.04□□□□□ -0.8
HIF1A-202ENST00000337138 SYNCRIPO60506 623 aaKnown RBP10.04□□□□□ -0.8
HIF1A-202ENST00000337138 MAFKO60675 156 aa10.04□□□□□ -0.8
HIF1A-202ENST00000337138 CLASP2O75122 1294 aaKnown RBP10.04□□□□□ -0.8
HIF1A-202ENST00000337138 NDUFS3O75489 264 aa10.04□□□□□ -0.8
HIF1A-202ENST00000337138 F2P00734 622 aa10.04□□□□□ -0.8
HIF1A-202ENST00000337138 SEPHS1P49903 392 aa10.04□□□□□ -0.8
HIF1A-202ENST00000337138 CDK9P50750 372 aaKnown RBP10.04□□□□□ -0.8
HIF1A-202ENST00000337138 BCAP31P51572 246 aa10.04□□□□□ -0.8
HIF1A-202ENST00000337138 OXCT1P55809 520 aa10.04□□□□□ -0.8
HIF1A-202ENST00000337138 UFM1P61960 85 aa10.04□□□□□ -0.8
HIF1A-202ENST00000337138 PPIL2Q13356 520 aa10.04□□□□□ -0.8
HIF1A-202ENST00000337138 PTPRRQ15256 657 aa10.04□□□□□ -0.8
HIF1A-202ENST00000337138 SLC39A12Q504Y0 691 aa10.04□□□□□ -0.8
HIF1A-202ENST00000337138 FAR2Q96K12 515 aa10.04□□□□□ -0.8
HIF1A-202ENST00000337138 C17orf80Q9BSJ5 609 aa10.04□□□□□ -0.8
HIF1A-202ENST00000337138 RAD21L1Q9H4I0 556 aa10.04□□□□□ -0.8
HIF1A-202ENST00000337138 KANSL1LA0AUZ9 987 aa10.03□□□□□ -0.8
HIF1A-202ENST00000337138 HTR3EA5X5Y0 456 aa10.03□□□□□ -0.8
HIF1A-202ENST00000337138 A8MU76 341 aa10.03□□□□□ -0.8
HIF1A-202ENST00000337138 E9PAM4 449 aa10.03□□□□□ -0.8
HIF1A-202ENST00000337138 FFAR3O14843 346 aa10.03□□□□□ -0.8
HIF1A-202ENST00000337138 MATN3O15232 486 aa10.03□□□□□ -0.8
HIF1A-202ENST00000337138 GPR42O15529 346 aa10.03□□□□□ -0.8
HIF1A-202ENST00000337138 PSMD3O43242 534 aa10.03□□□□□ -0.8
HIF1A-202ENST00000337138 LDLRP01130 860 aa10.03□□□□□ -0.8
HIF1A-202ENST00000337138 GRK4P32298 578 aa10.03□□□□□ -0.8
HIF1A-202ENST00000337138 LHX1P48742 406 aa10.03□□□□□ -0.8
HIF1A-202ENST00000337138 DGKQP52824 942 aa10.03□□□□□ -0.8
HIF1A-202ENST00000337138 MTA1Q13330 715 aa10.03□□□□□ -0.8
HIF1A-202ENST00000337138 CYP2A13Q16696 494 aa10.03□□□□□ -0.8
HIF1A-202ENST00000337138 DUSP28Q4G0W2 176 aa10.03□□□□□ -0.8
HIF1A-202ENST00000337138 AARS2Q5JTZ9 985 aaKnown RBP10.03□□□□□ -0.8
HIF1A-202ENST00000337138 OVOS1Q6IE37 1185 aa10.03□□□□□ -0.8
HIF1A-202ENST00000337138 TOP6BLQ8N6T0 577 aa10.03□□□□□ -0.8
HIF1A-202ENST00000337138 C2CD4AQ8NCU7 369 aaPredicted RBP10.03□□□□□ -0.8
HIF1A-202ENST00000337138 SKA2Q8WVK7 121 aaPredicted RBP10.03□□□□□ -0.8
HIF1A-202ENST00000337138 FATE1Q969F0 183 aa10.03□□□□□ -0.8
HIF1A-202ENST00000337138 MTFMTQ96DP5 389 aaKnown RBP10.03□□□□□ -0.8
HIF1A-202ENST00000337138 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.03□□□□□ -0.84e-7■■■□□ 16.1
HIF1A-202ENST00000337138 MED16Q9Y2X0 877 aa10.03□□□□□ -0.8
HIF1A-202ENST00000337138 ORC6Q9Y5N6 252 aa10.03□□□□□ -0.8
HIF1A-202ENST00000337138 ALPK3Q96L96 1907 aa10.03□□□□□ -0.8
HIF1A-202ENST00000337138 CDC7O00311 574 aa10.03□□□□□ -0.8
HIF1A-202ENST00000337138 RSL1D1O76021 490 aaKnown RBP10.03□□□□□ -0.8
HIF1A-202ENST00000337138 CHEK2O96017 543 aa10.03□□□□□ -0.8
HIF1A-202ENST00000337138 GOT2P00505 430 aaKnown RBP10.03□□□□□ -0.8
HIF1A-202ENST00000337138 INHBBP09529 407 aa10.03□□□□□ -0.8
HIF1A-202ENST00000337138 COL6A2P12110 1019 aa10.03□□□□□ -0.8
HIF1A-202ENST00000337138 IL7RP16871 459 aa10.03□□□□□ -0.8
HIF1A-202ENST00000337138 LBPP18428 481 aa10.03□□□□□ -0.8
HIF1A-202ENST00000337138 CD247P20963 164 aa10.03□□□□□ -0.8
HIF1A-202ENST00000337138 CLK1P49759 484 aaKnown RBP10.03□□□□□ -0.8
HIF1A-202ENST00000337138 GALNT1Q10472 559 aaPredicted RBP10.03□□□□□ -0.8
HIF1A-202ENST00000337138 LAPTM4AQ15012 233 aa10.03□□□□□ -0.8
HIF1A-202ENST00000337138 ZRANB3Q5FWF4 1079 aa10.03□□□□□ -0.8
HIF1A-202ENST00000337138 ELMSAN1Q6PJG2 1045 aa10.03□□□□□ -0.8
HIF1A-202ENST00000337138 PAQR3Q6TCH7 311 aa10.03□□□□□ -0.8
HIF1A-202ENST00000337138 EPHX4Q8IUS5 362 aa10.03□□□□□ -0.8
HIF1A-202ENST00000337138 CLHC1Q8NHS4 586 aa10.03□□□□□ -0.8
HIF1A-202ENST00000337138 CCDC126Q96EE4 140 aa10.03□□□□□ -0.8
HIF1A-202ENST00000337138 APOL5Q9BWW9 433 aa10.03□□□□□ -0.8
HIF1A-202ENST00000337138 ALG2Q9H553 416 aa10.03□□□□□ -0.8
HIF1A-202ENST00000337138 ARNT2Q9HBZ2 717 aa10.03□□□□□ -0.8
HIF1A-202ENST00000337138 SACM1LQ9NTJ5 587 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms