RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 RGS4P49798 205 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 CCR3P51677 355 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 HTRA3P83110 453 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 ABRQ12979 859 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 OTUD1Q5VV17 481 aaPredicted RBP8.17□□□□□ -1.1
HPS4-201ENST00000336873 UGT3A1Q6NUS8 523 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 KLHDC10Q6PID8 442 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 RNF19BQ6ZMZ0 732 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 SCD5Q86SK9 330 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 ATG16L2Q8NAA4 619 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 TMEM174Q8WUU8 243 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 SELENOMQ8WWX9 145 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 GLMNQ92990 594 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 FBXL8Q96CD0 374 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 RTP4Q96DX8 246 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 FAM120BQ96EK7 910 aaKnown RBP8.17□□□□□ -1.1
HPS4-201ENST00000336873 BTN2A3PQ96KV6 586 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 OCEL1Q9H607 264 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 NSUN3Q9H649 340 aaKnown RBP8.17□□□□□ -1.1
HPS4-201ENST00000336873 IPPKQ9H8X2 491 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 EXOSC4Q9NPD3 245 aaKnown RBP8.17□□□□□ -1.1
HPS4-201ENST00000336873 MRPL40Q9NQ50 206 aaKnown RBP8.17□□□□□ -1.1
HPS4-201ENST00000336873 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.17□□□□□ -1.1
HPS4-201ENST00000336873 C6orf203Q9P0P8 240 aaPredicted RBP8.17□□□□□ -1.1
HPS4-201ENST00000336873 ATP11BQ9Y2G3 1177 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 DNAJC15Q9Y5T4 150 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 SEC16AO15027 2179 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 ALPK2Q86TB3 2170 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 WDR87Q6ZQQ6 2873 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 SLC22A3O75751 556 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 RPL9P32969 192 aaKnown RBP8.17□□□□□ -1.1
HPS4-201ENST00000336873 SOAT1P35610 550 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 ADARP55265 1226 aaKnown RBP8.17□□□□□ -1.1
HPS4-201ENST00000336873 ITGADQ13349 1161 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 DMC1Q14565 340 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 MAPKAPK3Q16644 382 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 METTL21CQ5VZV1 264 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 OR52E8Q6IFG1 317 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 FAM45BPQ6NSW5 357 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 PSAPL1Q6NUJ1 521 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 B3GNT6Q6ZMB0 384 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 RNF111Q6ZNA4 994 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 TIFABQ6ZNK6 161 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 HS3ST5Q8IZT8 346 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 GALNT15Q8N3T1 639 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 PSD4Q8NDX1 1056 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 FAM45AQ8TCE6 357 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 UTP15Q8TED0 518 aaKnown RBP8.17□□□□□ -1.1
HPS4-201ENST00000336873 GANCQ8TET4 914 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 DGCR14Q96DF8 476 aaKnown RBP8.17□□□□□ -1.1
HPS4-201ENST00000336873 SLC9A7Q96T83 725 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 ADGRE3Q9BY15 652 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 FAM186AA6NE01 2351 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 ANKRD31Q8N7Z5 1873 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 SF3B1O75533 1304 aaKnown RBP eCLIP8.16□□□□□ -1.11e-7■■■■■ 66.8
HPS4-201ENST00000336873 A0A0U1RQF3 1178 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 LSM1O15116 133 aaKnown RBP8.16□□□□□ -1.1
HPS4-201ENST00000336873 DUSP11O75319 330 aaKnown RBP8.16□□□□□ -1.1
HPS4-201ENST00000336873 ECI2O75521 394 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 CDK14O94921 469 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 ZNF865P0CJ78 1059 aaPredicted RBP8.16□□□□□ -1.1
HPS4-201ENST00000336873 MYCLP1P12525 358 aaPredicted RBP8.16□□□□□ -1.1
HPS4-201ENST00000336873 LPOP22079 712 aaPredicted RBP8.16□□□□□ -1.1
HPS4-201ENST00000336873 STT3AP46977 705 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 RGRP47804 291 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 UBE3AQ05086 875 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 NAB1Q13506 487 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 OR4D1Q15615 310 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 GSTA3Q16772 222 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 FAM174BQ3ZCQ3 159 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 CYP27C1Q4G0S4 372 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 ZFP1Q6P2D0 407 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 MAMDC4Q6UXC1 1216 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 GPRIN3Q6ZVF9 776 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 NECAB2Q7Z6G3 386 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 OR56A4Q8NGH8 313 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 OR52J3Q8NH60 311 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 ZFP28Q8NHY6 868 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 NTAN1Q96AB6 310 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 APOLD1Q96LR9 279 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 MYOCQ99972 504 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 SIKE1Q9BRV8 207 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 KIFC1Q9BW19 673 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 UNC93B1Q9H1C4 597 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 CAPN10Q9HC96 672 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 PREBQ9HCU5 417 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 EIF2B3Q9NR50 452 aaKnown RBP8.16□□□□□ -1.1
HPS4-201ENST00000336873 ZNF229Q9UJW7 825 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 ANAPC2Q9UJX6 822 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 PRPF19Q9UMS4 504 aaKnown RBP8.16□□□□□ -1.1
HPS4-201ENST00000336873 QSER1Q2KHR3 1735 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 PNMA8CA0A1B0GUJ8 204 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 ANKRD33BA6NCL7 494 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 ALDH1A2O94788 518 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 PRAMEF1O95521 474 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 CST1P01037 141 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 IMPDH2P12268 514 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 PKMP14618 531 aaKnown RBP8.16□□□□□ -1.1
HPS4-201ENST00000336873 POU2F1P14859 743 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 IDH2P48735 452 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms