RNA–Protein interactions for RNA: ENST00000334352.8

USP16-201, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP16, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-201ENST00000334352 KIR3DX1Q9H7L2 352 aa6.29□□□□□ -1.4
USP16-201ENST00000334352 SLC40A1Q9NP59 571 aa6.29□□□□□ -1.4
USP16-201ENST00000334352 LUC7LQ9NQ29 371 aaKnown RBP6.29□□□□□ -1.4
USP16-201ENST00000334352 FOXJ2Q9P0K8 574 aa6.29□□□□□ -1.4
USP16-201ENST00000334352 ATXN10Q9UBB4 475 aa6.29□□□□□ -1.4
USP16-201ENST00000334352 CPNE7Q9UBL6 633 aa6.29□□□□□ -1.4
USP16-201ENST00000334352 TMPRSS11EQ9UL52 423 aa6.29□□□□□ -1.4
USP16-201ENST00000334352 PCDHA3Q9Y5H8 950 aa6.29□□□□□ -1.4
USP16-201ENST00000334352 EP300Q09472 2414 aaPredicted RBP6.29□□□□□ -1.4
USP16-201ENST00000334352 C5orf60A6NFR6 353 aa6.29□□□□□ -1.4
USP16-201ENST00000334352 ERI2A8K979 691 aaKnown RBP6.29□□□□□ -1.4
USP16-201ENST00000334352 APOC4-APOC2K7ER74 178 aa6.29□□□□□ -1.4
USP16-201ENST00000334352 ATMINO43313 823 aaPredicted RBP6.29□□□□□ -1.4
USP16-201ENST00000334352 ANXA9O76027 345 aa6.29□□□□□ -1.4
USP16-201ENST00000334352 APOC2P02655 101 aa6.29□□□□□ -1.4
USP16-201ENST00000334352 TPM1P09493 284 aa6.29□□□□□ -1.4
USP16-201ENST00000334352 SKILP12757 684 aa6.29□□□□□ -1.4
USP16-201ENST00000334352 LPOP22079 712 aaPredicted RBP6.29□□□□□ -1.4
USP16-201ENST00000334352 SPAM1P38567 509 aa6.29□□□□□ -1.4
USP16-201ENST00000334352 DSC2Q02487 901 aa6.29□□□□□ -1.4
USP16-201ENST00000334352 RELAQ04206 551 aa6.29□□□□□ -1.4
USP16-201ENST00000334352 ZBTB17Q13105 803 aa6.29□□□□□ -1.4
USP16-201ENST00000334352 KCNAB2Q13303 367 aa6.29□□□□□ -1.4
USP16-201ENST00000334352 C1orf61Q13536 156 aa6.29□□□□□ -1.4
USP16-201ENST00000334352 NOMO1Q15155 1222 aa6.29□□□□□ -1.4
USP16-201ENST00000334352 ZNF542PQ5EBM4 170 aa6.29□□□□□ -1.4
USP16-201ENST00000334352 TFDP3Q5H9I0 405 aa6.29□□□□□ -1.4
USP16-201ENST00000334352 ITPRIPL1Q6GPH6 555 aa6.29□□□□□ -1.4
USP16-201ENST00000334352 RANBP10Q6VN20 620 aa6.29□□□□□ -1.4
USP16-201ENST00000334352 SPOCD1Q6ZMY3 1216 aa6.29□□□□□ -1.4
USP16-201ENST00000334352 TP53INP2Q8IXH6 220 aa6.29□□□□□ -1.4
USP16-201ENST00000334352 OR2L2Q8NH16 312 aa6.29□□□□□ -1.4
USP16-201ENST00000334352 TFB1MQ8WVM0 346 aaKnown RBP6.29□□□□□ -1.4
USP16-201ENST00000334352 THAP4Q8WY91 577 aa6.29□□□□□ -1.4
USP16-201ENST00000334352 MRFAP1L1Q96HT8 127 aa6.29□□□□□ -1.4
USP16-201ENST00000334352 DHRS4Q9BTZ2 278 aa6.29□□□□□ -1.4
USP16-201ENST00000334352 C5AR2Q9P296 337 aa6.29□□□□□ -1.4
USP16-201ENST00000334352 GULP1Q9UBP9 304 aa6.29□□□□□ -1.4
USP16-201ENST00000334352 ZNHIT2Q9UHR6 403 aa6.29□□□□□ -1.4
USP16-201ENST00000334352 ZKSCAN5Q9Y2L8 839 aa6.29□□□□□ -1.4
USP16-201ENST00000334352 AAR2Q9Y312 384 aaKnown RBP6.29□□□□□ -1.4
USP16-201ENST00000334352 F8W8V4 182 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 SUN1O94901 812 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 CD48P09326 243 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 ZNF8P17098 575 aaPredicted RBP6.28□□□□□ -1.4
USP16-201ENST00000334352 BPIP17213 487 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 ATP5DP30049 168 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 CASP14P31944 242 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 CSTF2P33240 577 aaKnown RBP eCLIP6.28□□□□□ -1.4
USP16-201ENST00000334352 CD68P34810 354 aaPredicted RBP6.28□□□□□ -1.4
USP16-201ENST00000334352 HADHAP40939 763 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 CASRP41180 1078 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 GSDMDP57764 484 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 FOXK1P85037 733 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 ACY1Q03154 408 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 ADCY2Q08462 1091 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 CDC20Q12834 499 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 ITIH4Q14624 930 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 HSP90AA4PQ58FG1 418 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 KCTD11Q693B1 232 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 ATG14Q6ZNE5 492 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 ZNF354CQ86Y25 554 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 RAPGEF5Q92565 580 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 EXOC2Q96KP1 924 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 MRGPRX2Q96LB1 330 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 PITPNM3Q9BZ71 974 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 CLMPQ9H6B4 373 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 MVB12BQ9H7P6 319 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 NHEJ1Q9H9Q4 299 aaPredicted RBP6.28□□□□□ -1.4
USP16-201ENST00000334352 SLC39A1Q9NY26 324 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 KLHL42Q9P2K6 505 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 DNAH14Q0VDD8 3507 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 GOLGA6L19H0YKK7 550 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 CLDN7O95471 211 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 HBQ1P09105 142 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 CCR10P46092 362 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 MAZP56270 477 aaKnown RBP6.28□□□□□ -1.4
USP16-201ENST00000334352 HHEXQ03014 270 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 GBE1Q04446 702 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 MMRN1Q13201 1228 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 MAP9Q49MG5 647 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 TCTN3Q6NUS6 607 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 LEKR1Q6ZMV7 388 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 PHLDB2Q86SQ0 1253 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 SYVN1Q86TM6 617 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 ZNF547Q8IVP9 402 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 CDKL3Q8IVW4 592 aaPredicted RBP6.28□□□□□ -1.4
USP16-201ENST00000334352 TTC13Q8NBP0 860 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 GPR26Q8NDV2 337 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 LRRC45Q96CN5 670 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 DCBLD2Q96PD2 775 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 MYOCQ99972 504 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 GORASP1Q9BQQ3 440 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 SLC25A18Q9H1K4 315 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 CPNE5Q9HCH3 593 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 CTTNBP2NLQ9P2B4 639 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 MYO1AQ9UBC5 1043 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 TBC1D29Q9UFV1 150 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 KCND3Q9UK17 655 aa6.28□□□□□ -1.4
USP16-201ENST00000334352 CCDC66A2RUB6 948 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms