RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 SPATA19Q7Z5L4 167 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 RPRD1AQ96P16 312 aaPredicted RBP10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 RHBGQ9H310 441 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 CPVLQ9H3G5 476 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 ANKRD36CQ5JPF3 1778 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 FAM186AA6NE01 2351 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 LOC100509620A0A075B734 347 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 OR1I1O60431 355 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 CHMP24386 653 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 TCF7P36402 384 aaPredicted RBP10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 CLK3P49761 638 aaKnown RBP10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 SP140Q13342 867 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 KCTD19Q17RG1 926 aaPredicted RBP10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 TIGD6Q17RP2 521 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 MFSD14CQ5VZR4 134 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 SPOCD1Q6ZMY3 1216 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 RCN3Q96D15 328 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 TRHDEQ9UKU6 1024 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 LOC102724428A0A0B4J2F2 783 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 DCLK1O15075 740 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 OIP5O43482 229 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 EPCAMP16422 314 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 GMPSP49915 693 aaPredicted RBP10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 SIK1P57059 783 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 NFE2Q16621 373 aaPredicted RBP10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 INTS6LQ5JSJ4 861 aaKnown RBP10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 LRRC38Q5VT99 294 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 FRRS1Q6ZNA5 592 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 LNX2Q8N448 690 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 WDSUB1Q8N9V3 476 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 FNDC11Q9BVV2 318 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 ZNF69Q9UC07 566 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 RBAK-RBAKDNI3L0D1 243 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 PDX1P52945 283 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 PAMR1Q6UXH9 720 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 CLIP4Q8N3C7 705 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 METTL4Q8N3J2 472 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 TESCQ96BS2 214 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 PTTG3PQ9NZH4 202 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 ARHGEF17Q96PE2 2063 aaPredicted RBP10.27□□□□□ -0.76
SPTBN1-201ENST00000333896 RPTORQ8N122 1335 aa10.27□□□□□ -0.76
SPTBN1-201ENST00000333896 A0A1B0GVI7 797 aa10.27□□□□□ -0.76
SPTBN1-201ENST00000333896 ATP6AP2A0A1C7CYW4 349 aa10.27□□□□□ -0.76
SPTBN1-201ENST00000333896 USP17L10C9JJH3 530 aa10.27□□□□□ -0.76
SPTBN1-201ENST00000333896 NPIPA7E9PJI5 369 aa10.27□□□□□ -0.76
SPTBN1-201ENST00000333896 L7N2F9 121 aa10.27□□□□□ -0.76
SPTBN1-201ENST00000333896 GIMD1P0DJR0 217 aa10.27□□□□□ -0.76
SPTBN1-201ENST00000333896 NPIPA8P0DM63 369 aa10.27□□□□□ -0.76
SPTBN1-201ENST00000333896 SSTR1P30872 391 aa10.27□□□□□ -0.76
SPTBN1-201ENST00000333896 GRIA4P48058 902 aa10.27□□□□□ -0.76
SPTBN1-201ENST00000333896 VAMP2P63027 116 aa10.27□□□□□ -0.76
SPTBN1-201ENST00000333896 SLC3A1Q07837 685 aa10.27□□□□□ -0.76
SPTBN1-201ENST00000333896 BMPR2Q13873 1038 aa10.27□□□□□ -0.76
SPTBN1-201ENST00000333896 ABCA11PQ4W5N1 156 aa10.27□□□□□ -0.76
SPTBN1-201ENST00000333896 IDO2Q6ZQW0 420 aa10.27□□□□□ -0.76
SPTBN1-201ENST00000333896 GALNT5Q7Z7M9 940 aa10.27□□□□□ -0.76
SPTBN1-201ENST00000333896 FAM109AQ8N4B1 249 aa10.27□□□□□ -0.76
SPTBN1-201ENST00000333896 SLC37A3Q8NCC5 494 aa10.27□□□□□ -0.76
SPTBN1-201ENST00000333896 TMEM159Q96B96 161 aa10.27□□□□□ -0.76
SPTBN1-201ENST00000333896 OR10H2O60403 315 aa10.27□□□□□ -0.76
SPTBN1-201ENST00000333896 NCS1P62166 190 aa10.27□□□□□ -0.76
SPTBN1-201ENST00000333896 VSTM1Q6UX27 236 aa10.27□□□□□ -0.76
SPTBN1-201ENST00000333896 ZCCHC23Q6ZST2 131 aa10.27□□□□□ -0.76
SPTBN1-201ENST00000333896 SMIM15Q7Z3B0 74 aa10.27□□□□□ -0.76
SPTBN1-201ENST00000333896 FLAD1Q8NFF5 587 aa10.27□□□□□ -0.76
SPTBN1-201ENST00000333896 CD300LFQ8TDQ1 290 aa10.27□□□□□ -0.76
SPTBN1-201ENST00000333896 NIF3L1Q9GZT8 377 aa10.27□□□□□ -0.76
SPTBN1-201ENST00000333896 H0YAE9 185 aa10.27□□□□□ -0.77
SPTBN1-201ENST00000333896 ACOX3O15254 700 aa10.27□□□□□ -0.77
SPTBN1-201ENST00000333896 FAM189A1O60320 539 aa10.27□□□□□ -0.77
SPTBN1-201ENST00000333896 CYP3A4P08684 503 aa10.27□□□□□ -0.77
SPTBN1-201ENST00000333896 TYMPP19971 482 aa10.27□□□□□ -0.77
SPTBN1-201ENST00000333896 DSTNP60981 165 aa10.27□□□□□ -0.77
SPTBN1-201ENST00000333896 ATP6V0D1P61421 351 aa10.27□□□□□ -0.77
SPTBN1-201ENST00000333896 PON2Q15165 354 aa10.27□□□□□ -0.77
SPTBN1-201ENST00000333896 EMC10Q5UCC4 262 aa10.27□□□□□ -0.77
SPTBN1-201ENST00000333896 C6orf89Q6UWU4 347 aa10.27□□□□□ -0.77
SPTBN1-201ENST00000333896 QSOX2Q6ZRP7 698 aa10.27□□□□□ -0.77
SPTBN1-201ENST00000333896 TSPAN33Q86UF1 283 aa10.27□□□□□ -0.77
SPTBN1-201ENST00000333896 PCDH20Q8N6Y1 951 aaKnown RBP10.27□□□□□ -0.77
SPTBN1-201ENST00000333896 SLC22A8Q8TCC7 542 aa10.27□□□□□ -0.77
SPTBN1-201ENST00000333896 KCTD7Q96MP8 289 aa10.27□□□□□ -0.77
SPTBN1-201ENST00000333896 OSGEPQ9NPF4 335 aa10.27□□□□□ -0.77
SPTBN1-201ENST00000333896 INTS7Q9NVH2 962 aaKnown RBP10.27□□□□□ -0.77
SPTBN1-201ENST00000333896 DLGAP1O14490 977 aa10.27□□□□□ -0.77
SPTBN1-201ENST00000333896 RRM1P23921 792 aa10.27□□□□□ -0.77
SPTBN1-201ENST00000333896 GABARAPL2P60520 117 aa10.27□□□□□ -0.77
SPTBN1-201ENST00000333896 CUL2Q13617 745 aa10.27□□□□□ -0.77
SPTBN1-201ENST00000333896 BRINP3Q76B58 766 aa10.27□□□□□ -0.77
SPTBN1-201ENST00000333896 GPSM1Q86YR5 675 aa10.27□□□□□ -0.77
SPTBN1-201ENST00000333896 ZDHHC17Q8IUH5 632 aa10.27□□□□□ -0.77
SPTBN1-201ENST00000333896 IGDCC4Q8TDY8 1250 aa10.27□□□□□ -0.77
SPTBN1-201ENST00000333896 NUDT16L1Q9BRJ7 211 aaKnown RBP10.27□□□□□ -0.77
SPTBN1-201ENST00000333896 ACE2Q9BYF1 805 aaPredicted RBP10.27□□□□□ -0.77
SPTBN1-201ENST00000333896 ALG2Q9H553 416 aa10.27□□□□□ -0.77
SPTBN1-201ENST00000333896 PLEKHA1Q9HB21 404 aa10.27□□□□□ -0.77
SPTBN1-201ENST00000333896 WDR6Q9NNW5 1121 aaKnown RBP10.27□□□□□ -0.77
SPTBN1-201ENST00000333896 SETD4Q9NVD3 440 aa10.27□□□□□ -0.77
SPTBN1-201ENST00000333896 WDR27A2RRH5 827 aa10.27□□□□□ -0.77
SPTBN1-201ENST00000333896 AGPSO00116 658 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms