RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 PPP1R2P1Q96PQ5 205 aa11.78□□□□□ -0.52
SHMT2-201ENST00000328923 ZNF300Q96RE9 604 aaPredicted RBP11.78□□□□□ -0.52
SHMT2-201ENST00000328923 C14orf119Q9NWQ9 140 aa11.78□□□□□ -0.52
SHMT2-201ENST00000328923 PAK5Q9P286 719 aa11.78□□□□□ -0.52
SHMT2-201ENST00000328923 PRKAG2Q9UGJ0 569 aa11.78□□□□□ -0.52
SHMT2-201ENST00000328923 ANKRD6Q9Y2G4 727 aa11.78□□□□□ -0.52
SHMT2-201ENST00000328923 PCDHB12Q9Y5F1 795 aa11.78□□□□□ -0.52
SHMT2-201ENST00000328923 STON1Q9Y6Q2 735 aa11.78□□□□□ -0.52
SHMT2-201ENST00000328923 MEIOCA2RUB1 952 aa11.77□□□□□ -0.53
SHMT2-201ENST00000328923 LINC00862A6NCI5 91 aa11.77□□□□□ -0.53
SHMT2-201ENST00000328923 FZD9O00144 591 aa11.77□□□□□ -0.53
SHMT2-201ENST00000328923 TFECO14948 347 aaPredicted RBP11.77□□□□□ -0.53
SHMT2-201ENST00000328923 DHX15O43143 795 aaKnown RBP11.77□□□□□ -0.53
SHMT2-201ENST00000328923 SULT1B1O43704 296 aa11.77□□□□□ -0.53
SHMT2-201ENST00000328923 GLRA3O75311 464 aa11.77□□□□□ -0.53
SHMT2-201ENST00000328923 C7P10643 843 aa11.77□□□□□ -0.53
SHMT2-201ENST00000328923 STMN1P16949 149 aa11.77□□□□□ -0.53
SHMT2-201ENST00000328923 HDCP19113 662 aa11.77□□□□□ -0.53
SHMT2-201ENST00000328923 TNNI3P19429 210 aa11.77□□□□□ -0.53
SHMT2-201ENST00000328923 TGM2P21980 687 aa11.77□□□□□ -0.53
SHMT2-201ENST00000328923 FSHRP23945 695 aa11.77□□□□□ -0.53
SHMT2-201ENST00000328923 HTR7P34969 479 aa11.77□□□□□ -0.53
SHMT2-201ENST00000328923 ROR1Q01973 937 aa11.77□□□□□ -0.53
SHMT2-201ENST00000328923 FAM102BQ5T8I3 360 aa11.77□□□□□ -0.53
SHMT2-201ENST00000328923 TDRD10Q5VZ19 366 aaKnown RBP11.77□□□□□ -0.53
SHMT2-201ENST00000328923 SULT1C3Q6IMI6 304 aa11.77□□□□□ -0.53
SHMT2-201ENST00000328923 TRMT10BQ6PF06 316 aaKnown RBP11.77□□□□□ -0.53
SHMT2-201ENST00000328923 TBPL2Q6SJ96 375 aa11.77□□□□□ -0.53
SHMT2-201ENST00000328923 LAYNQ6UX15 382 aa11.77□□□□□ -0.53
SHMT2-201ENST00000328923 PLD3Q8IV08 490 aa11.77□□□□□ -0.53
SHMT2-201ENST00000328923 C2orf69Q8N8R5 385 aa11.77□□□□□ -0.53
SHMT2-201ENST00000328923 ZNF557Q8N988 423 aaPredicted RBP11.77□□□□□ -0.53
SHMT2-201ENST00000328923 ZNF606Q8WXB4 792 aa11.77□□□□□ -0.53
SHMT2-201ENST00000328923 HDAC10Q969S8 669 aa11.77□□□□□ -0.53
SHMT2-201ENST00000328923 SAMD11Q96NU1 681 aa11.77□□□□□ -0.53
SHMT2-201ENST00000328923 TNKS2Q9H2K2 1166 aa11.77□□□□□ -0.53
SHMT2-201ENST00000328923 TM9SF3Q9HD45 589 aa11.77□□□□□ -0.53
SHMT2-201ENST00000328923 LTB4R2Q9NPC1 389 aa11.77□□□□□ -0.53
SHMT2-201ENST00000328923 KMT5AQ9NQR1 393 aa11.77□□□□□ -0.53
SHMT2-201ENST00000328923 TRMT13Q9NUP7 481 aaKnown RBP11.77□□□□□ -0.53
SHMT2-201ENST00000328923 ARHGAP28Q9P2N2 729 aa11.77□□□□□ -0.53
SHMT2-201ENST00000328923 SLC9A2Q9UBY0 812 aa11.77□□□□□ -0.53
SHMT2-201ENST00000328923 OSGIN1Q9UJX0 560 aa11.77□□□□□ -0.53
SHMT2-201ENST00000328923 NRCAMQ92823 1304 aa11.77□□□□□ -0.53
SHMT2-201ENST00000328923 ZNF487B1APH4 448 aa11.77□□□□□ -0.53
SHMT2-201ENST00000328923 PTGES3LE9PB15 166 aa11.77□□□□□ -0.53
SHMT2-201ENST00000328923 SYN3O14994 580 aa11.77□□□□□ -0.53
SHMT2-201ENST00000328923 ZNF30P17039 623 aa11.77□□□□□ -0.53
SHMT2-201ENST00000328923 ITGB6P18564 788 aa11.77□□□□□ -0.53
SHMT2-201ENST00000328923 MPSTP25325 297 aa11.77□□□□□ -0.53
SHMT2-201ENST00000328923 OXTRP30559 389 aa11.77□□□□□ -0.53
SHMT2-201ENST00000328923 RPL35P42766 123 aaKnown RBP11.77□□□□□ -0.53
SHMT2-201ENST00000328923 MRPL28Q13084 256 aaKnown RBP11.77□□□□□ -0.53
SHMT2-201ENST00000328923 TNFAIP1Q13829 316 aa11.77□□□□□ -0.53
SHMT2-201ENST00000328923 STARD3Q14849 445 aa11.77□□□□□ -0.53
SHMT2-201ENST00000328923 ACOX1Q15067 660 aa11.77□□□□□ -0.53
SHMT2-201ENST00000328923 LRRC26Q2I0M4 334 aa11.77□□□□□ -0.53
SHMT2-201ENST00000328923 CYS1Q717R9 158 aa11.77□□□□□ -0.53
SHMT2-201ENST00000328923 NECAB2Q7Z6G3 386 aa11.77□□□□□ -0.53
SHMT2-201ENST00000328923 C11orf96Q7Z7L8 435 aa11.77□□□□□ -0.53
SHMT2-201ENST00000328923 FAM160B2Q86V87 743 aa11.77□□□□□ -0.53
SHMT2-201ENST00000328923 RAB43Q86YS6 212 aa11.77□□□□□ -0.53
SHMT2-201ENST00000328923 CDH26Q8IXH8 852 aa11.77□□□□□ -0.53
SHMT2-201ENST00000328923 CNTD1Q8N815 330 aa11.77□□□□□ -0.53
SHMT2-201ENST00000328923 RTP4Q96DX8 246 aa11.77□□□□□ -0.53
SHMT2-201ENST00000328923 APOBEC3GQ9HC16 384 aaKnown RBP11.77□□□□□ -0.53
SHMT2-201ENST00000328923 CD300AQ9UGN4 299 aa11.77□□□□□ -0.53
SHMT2-201ENST00000328923 BTBD3Q9Y2F9 522 aa11.77□□□□□ -0.53
SHMT2-201ENST00000328923 SNX5Q9Y5X3 404 aa11.77□□□□□ -0.53
SHMT2-201ENST00000328923 COPG1Q9Y678 874 aaKnown RBP11.77□□□□□ -0.53
SHMT2-201ENST00000328923 DHRS12A0PJE2 317 aa11.76□□□□□ -0.53
SHMT2-201ENST00000328923 SLC22A2O15244 555 aa11.76□□□□□ -0.53
SHMT2-201ENST00000328923 NUPL2O15504 423 aaKnown RBP11.76□□□□□ -0.53
SHMT2-201ENST00000328923 TSC22D2O75157 780 aa11.76□□□□□ -0.53
SHMT2-201ENST00000328923 OR2B3O76000 313 aa11.76□□□□□ -0.53
SHMT2-201ENST00000328923 POU2F1P14859 743 aa11.76□□□□□ -0.53
SHMT2-201ENST00000328923 ITGB5P18084 799 aa11.76□□□□□ -0.53
SHMT2-201ENST00000328923 ERP29P30040 261 aaKnown RBP11.76□□□□□ -0.53
SHMT2-201ENST00000328923 HMGCLP35914 325 aa11.76□□□□□ -0.53
SHMT2-201ENST00000328923 CSTF3Q12996 717 aaKnown RBP11.76□□□□□ -0.53
SHMT2-201ENST00000328923 NOMO1Q15155 1222 aa11.76□□□□□ -0.53
SHMT2-201ENST00000328923 PSMD5Q16401 504 aa11.76□□□□□ -0.53
SHMT2-201ENST00000328923 RBM48Q5RL73 367 aaKnown RBP11.76□□□□□ -0.53
SHMT2-201ENST00000328923 CREB3L2Q70SY1 520 aa11.76□□□□□ -0.53
SHMT2-201ENST00000328923 P2RY8Q86VZ1 359 aa11.76□□□□□ -0.53
SHMT2-201ENST00000328923 PLCZ1Q86YW0 608 aa11.76□□□□□ -0.53
SHMT2-201ENST00000328923 SPPL2CQ8IUH8 684 aa11.76□□□□□ -0.53
SHMT2-201ENST00000328923 ARRDC4Q8NCT1 418 aa11.76□□□□□ -0.53
SHMT2-201ENST00000328923 WDR48Q8TAF3 677 aa11.76□□□□□ -0.53
SHMT2-201ENST00000328923 ST8SIA4Q92187 359 aa11.76□□□□□ -0.53
SHMT2-201ENST00000328923 CIDECQ96AQ7 238 aaPredicted RBP11.76□□□□□ -0.53
SHMT2-201ENST00000328923 FAF2Q96CS3 445 aa11.76□□□□□ -0.53
SHMT2-201ENST00000328923 SIPA1Q96FS4 1042 aa11.76□□□□□ -0.53
SHMT2-201ENST00000328923 FAM213AQ9BRX8 229 aa11.76□□□□□ -0.53
SHMT2-201ENST00000328923 ZNF358Q9NW07 568 aa11.76□□□□□ -0.53
SHMT2-201ENST00000328923 GPRC5BQ9NZH0 403 aa11.76□□□□□ -0.53
SHMT2-201ENST00000328923 EHD3Q9NZN3 535 aa11.76□□□□□ -0.53
SHMT2-201ENST00000328923 CCDC59Q9P031 241 aaKnown RBP11.76□□□□□ -0.53
SHMT2-201ENST00000328923 FEM1BQ9UK73 627 aa11.76□□□□□ -0.53
SHMT2-201ENST00000328923 GRIP1Q9Y3R0 1128 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms