RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 CAPNS1P04632 268 aa13.93□□□□□ -0.18
ATP2C1-201ENST00000328560 RPL17P18621 184 aaKnown RBP13.93□□□□□ -0.18
ATP2C1-201ENST00000328560 HOXD9P28356 352 aaPredicted RBP13.93□□□□□ -0.18
ATP2C1-201ENST00000328560 RANBP1P43487 201 aa13.93□□□□□ -0.18
ATP2C1-201ENST00000328560 SP3Q02447 781 aa13.93□□□□□ -0.18
ATP2C1-201ENST00000328560 NHSL2Q5HYW2 709 aa13.93□□□□□ -0.18
ATP2C1-201ENST00000328560 C8orf82Q6P1X6 216 aaPredicted RBP13.93□□□□□ -0.18
ATP2C1-201ENST00000328560 PRMT9Q6P2P2 845 aa13.93□□□□□ -0.18
ATP2C1-201ENST00000328560 AFTPHQ6ULP2 937 aa13.93□□□□□ -0.18
ATP2C1-201ENST00000328560 PRSS55Q6UWB4 352 aaPredicted RBP13.93□□□□□ -0.18
ATP2C1-201ENST00000328560 CLVS1Q8IUQ0 354 aaPredicted RBP13.93□□□□□ -0.18
ATP2C1-201ENST00000328560 OR52B6Q8NGF0 335 aa13.93□□□□□ -0.18
ATP2C1-201ENST00000328560 EZH1Q92800 747 aaPredicted RBP13.93□□□□□ -0.18
ATP2C1-201ENST00000328560 PPM1MQ96MI6 270 aa13.93□□□□□ -0.18
ATP2C1-201ENST00000328560 ZIC5Q96T25 663 aa13.93□□□□□ -0.18
ATP2C1-201ENST00000328560 DCUN1D5Q9BTE7 237 aa13.93□□□□□ -0.18
ATP2C1-201ENST00000328560 ADI1Q9BV57 179 aa13.93□□□□□ -0.18
ATP2C1-201ENST00000328560 MUC3BQ9H195 1237 aa13.93□□□□□ -0.18
ATP2C1-201ENST00000328560 MED16Q9Y2X0 877 aa13.93□□□□□ -0.18
ATP2C1-201ENST00000328560 LCHNA4D1U4 455 aa13.93□□□□□ -0.18
ATP2C1-201ENST00000328560 SYCE1LA8MT33 242 aa13.93□□□□□ -0.18
ATP2C1-201ENST00000328560 INSIG1O15503 277 aa13.93□□□□□ -0.18
ATP2C1-201ENST00000328560 PENKP01210 267 aaPredicted RBP13.93□□□□□ -0.18
ATP2C1-201ENST00000328560 RHOCP08134 193 aa13.93□□□□□ -0.18
ATP2C1-201ENST00000328560 BMP2P12643 396 aa13.93□□□□□ -0.18
ATP2C1-201ENST00000328560 MAPKAPK2P49137 400 aa13.93□□□□□ -0.18
ATP2C1-201ENST00000328560 ATP6V0D1P61421 351 aa13.93□□□□□ -0.18
ATP2C1-201ENST00000328560 ACVR1Q04771 509 aa13.93□□□□□ -0.18
ATP2C1-201ENST00000328560 SETMARQ53H47 684 aaPredicted RBP13.93□□□□□ -0.18
ATP2C1-201ENST00000328560 EPHX4Q8IUS5 362 aa13.93□□□□□ -0.18
ATP2C1-201ENST00000328560 MINDY1Q8N5J2 469 aa13.93□□□□□ -0.18
ATP2C1-201ENST00000328560 ANKFN1Q8N957 763 aa13.93□□□□□ -0.18
ATP2C1-201ENST00000328560 GPR150Q8NGU9 434 aa13.93□□□□□ -0.18
ATP2C1-201ENST00000328560 RNF145Q96MT1 663 aa13.93□□□□□ -0.18
ATP2C1-201ENST00000328560 DERL2Q9GZP9 239 aa13.93□□□□□ -0.18
ATP2C1-201ENST00000328560 NLE1Q9NVX2 485 aaPredicted RBP13.93□□□□□ -0.18
ATP2C1-201ENST00000328560 AGO1Q9UL18 857 aaKnown RBP13.93□□□□□ -0.18
ATP2C1-201ENST00000328560 GPR45Q9Y5Y3 372 aa13.93□□□□□ -0.18
ATP2C1-201ENST00000328560 SCN10AQ9Y5Y9 1956 aa13.93□□□□□ -0.18
ATP2C1-201ENST00000328560 SYN3O14994 580 aa13.92□□□□□ -0.18
ATP2C1-201ENST00000328560 CLOCKO15516 846 aa13.92□□□□□ -0.18
ATP2C1-201ENST00000328560 GUCA1CO95843 209 aa13.92□□□□□ -0.18
ATP2C1-201ENST00000328560 EPOP01588 193 aa13.92□□□□□ -0.18
ATP2C1-201ENST00000328560 PCNAP12004 261 aa13.92□□□□□ -0.18
ATP2C1-201ENST00000328560 PKMP14618 531 aaKnown RBP13.92□□□□□ -0.18
ATP2C1-201ENST00000328560 ZNF23P17027 643 aa13.92□□□□□ -0.18
ATP2C1-201ENST00000328560 HOXB8P17481 243 aaPredicted RBP13.92□□□□□ -0.18
ATP2C1-201ENST00000328560 PIK3CGP48736 1102 aa13.92□□□□□ -0.18
ATP2C1-201ENST00000328560 IL2P60568 153 aa13.92□□□□□ -0.18
ATP2C1-201ENST00000328560 PLCL1Q15111 1095 aa13.92□□□□□ -0.18
ATP2C1-201ENST00000328560 ADRM1Q16186 407 aa13.92□□□□□ -0.18
ATP2C1-201ENST00000328560 ZIK1Q3SY52 487 aaPredicted RBP13.92□□□□□ -0.18
ATP2C1-201ENST00000328560 KIAA1841Q6NSI8 718 aa13.92□□□□□ -0.18
ATP2C1-201ENST00000328560 SLC2A7Q6PXP3 512 aa13.92□□□□□ -0.18
ATP2C1-201ENST00000328560 FRA10AC1Q70Z53 315 aa13.92□□□□□ -0.18
ATP2C1-201ENST00000328560 LINC01599Q8WXQ3 324 aa13.92□□□□□ -0.18
ATP2C1-201ENST00000328560 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.92□□□□□ -0.182e-7■■■■■ 62.8
ATP2C1-201ENST00000328560 TADA1Q96BN2 335 aa13.92□□□□□ -0.18
ATP2C1-201ENST00000328560 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.92□□□□□ -0.18
ATP2C1-201ENST00000328560 ARMC1Q9NVT9 282 aa13.92□□□□□ -0.18
ATP2C1-201ENST00000328560 SMPD4Q9NXE4 827 aa13.92□□□□□ -0.18
ATP2C1-201ENST00000328560 ACTR3BQ9P1U1 418 aa13.92□□□□□ -0.18
ATP2C1-201ENST00000328560 ZMYM5Q9UJ78 669 aa13.92□□□□□ -0.18
ATP2C1-201ENST00000328560 RAI2Q9Y5P3 530 aa13.92□□□□□ -0.18
ATP2C1-201ENST00000328560 SQORQ9Y6N5 450 aa13.92□□□□□ -0.18
ATP2C1-201ENST00000328560 A0A1W2PP18 115 aa13.92□□□□□ -0.18
ATP2C1-201ENST00000328560 ACSL4O60488 711 aa13.92□□□□□ -0.18
ATP2C1-201ENST00000328560 TMCC1O94876 653 aa13.92□□□□□ -0.18
ATP2C1-201ENST00000328560 BNIP2Q12982 314 aa13.92□□□□□ -0.18
ATP2C1-201ENST00000328560 MBTPS1Q14703 1052 aa13.92□□□□□ -0.18
ATP2C1-201ENST00000328560 GPRIN3Q6ZVF9 776 aa13.92□□□□□ -0.18
ATP2C1-201ENST00000328560 CHST15Q7LFX5 561 aaPredicted RBP13.92□□□□□ -0.18
ATP2C1-201ENST00000328560 ADGRG5Q8IZF4 528 aa13.92□□□□□ -0.18
ATP2C1-201ENST00000328560 OR2T11Q8NH01 316 aa13.92□□□□□ -0.18
ATP2C1-201ENST00000328560 METTL6Q8TCB7 284 aa13.92□□□□□ -0.18
ATP2C1-201ENST00000328560 TFAP2CQ92754 450 aa13.92□□□□□ -0.18
ATP2C1-201ENST00000328560 ZUFSPQ96AP4 578 aa13.92□□□□□ -0.18
ATP2C1-201ENST00000328560 ATXN10Q9UBB4 475 aa13.92□□□□□ -0.18
ATP2C1-201ENST00000328560 OR6C75A6NL08 312 aa13.92□□□□□ -0.18
ATP2C1-201ENST00000328560 AQP12BA6NM10 295 aa13.92□□□□□ -0.18
ATP2C1-201ENST00000328560 CTPS1P17812 591 aa13.92□□□□□ -0.18
ATP2C1-201ENST00000328560 LPOP22079 712 aaPredicted RBP13.92□□□□□ -0.18
ATP2C1-201ENST00000328560 YAP1P46937 504 aaKnown RBP13.92□□□□□ -0.18
ATP2C1-201ENST00000328560 POLR2JP52435 117 aaKnown RBP13.92□□□□□ -0.18
ATP2C1-201ENST00000328560 ZNF140P52738 457 aaPredicted RBP13.92□□□□□ -0.18
ATP2C1-201ENST00000328560 ESRRGP62508 458 aa13.92□□□□□ -0.18
ATP2C1-201ENST00000328560 MERTKQ12866 999 aa13.92□□□□□ -0.18
ATP2C1-201ENST00000328560 AAK1Q2M2I8 961 aa13.92□□□□□ -0.18
ATP2C1-201ENST00000328560 TMEM259Q4ZIN3 620 aa13.92□□□□□ -0.18
ATP2C1-201ENST00000328560 IL27RAQ6UWB1 636 aa13.92□□□□□ -0.18
ATP2C1-201ENST00000328560 AQP12AQ8IXF9 295 aa13.92□□□□□ -0.18
ATP2C1-201ENST00000328560 OR56A4Q8NGH8 313 aa13.92□□□□□ -0.18
ATP2C1-201ENST00000328560 OR6K2Q8NGY2 324 aa13.92□□□□□ -0.18
ATP2C1-201ENST00000328560 TMEM125Q96AQ2 219 aa13.92□□□□□ -0.18
ATP2C1-201ENST00000328560 INTS10Q9NVR2 710 aaKnown RBP13.92□□□□□ -0.18
ATP2C1-201ENST00000328560 ZNF225Q9UK10 706 aa13.92□□□□□ -0.18
ATP2C1-201ENST00000328560 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.91□□□□□ -0.18
ATP2C1-201ENST00000328560 SNAP91O60641 907 aa13.91□□□□□ -0.18
ATP2C1-201ENST00000328560 C1RP00736 705 aa13.91□□□□□ -0.18
ATP2C1-201ENST00000328560 CNPP09543 421 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms