RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 TSGA13Q96PP4 275 aa11.33□□□□□ -0.6
COL4A5-201ENST00000328300 PANX1Q96RD7 426 aa11.33□□□□□ -0.6
COL4A5-201ENST00000328300 RNF39Q9H2S5 420 aa11.33□□□□□ -0.6
COL4A5-201ENST00000328300 SAGE1Q9NXZ1 904 aa11.33□□□□□ -0.6
COL4A5-201ENST00000328300 FCF1Q9Y324 198 aaKnown RBP11.33□□□□□ -0.6
COL4A5-201ENST00000328300 MYH2Q9UKX2 1941 aa11.33□□□□□ -0.6
COL4A5-201ENST00000328300 GPR32O75388 356 aa11.33□□□□□ -0.6
COL4A5-201ENST00000328300 TM7SF2O76062 418 aa11.33□□□□□ -0.6
COL4A5-201ENST00000328300 UMPSP11172 480 aa11.33□□□□□ -0.6
COL4A5-201ENST00000328300 NOS3P29474 1203 aa11.33□□□□□ -0.6
COL4A5-201ENST00000328300 OASLQ15646 514 aaKnown RBP11.33□□□□□ -0.6
COL4A5-201ENST00000328300 CMC1Q7Z7K0 106 aa11.33□□□□□ -0.6
COL4A5-201ENST00000328300 STK32CQ86UX6 486 aa11.33□□□□□ -0.6
COL4A5-201ENST00000328300 TMEM174Q8WUU8 243 aa11.33□□□□□ -0.6
COL4A5-201ENST00000328300 TRAPPC9Q96Q05 1148 aa11.33□□□□□ -0.6
COL4A5-201ENST00000328300 HMGXB4Q9UGU5 601 aa11.33□□□□□ -0.6
COL4A5-201ENST00000328300 A0A1W2PPM1 405 aa11.33□□□□□ -0.6
COL4A5-201ENST00000328300 KLHL33A6NCF5 533 aa11.33□□□□□ -0.6
COL4A5-201ENST00000328300 DLGAP3O95886 979 aa11.33□□□□□ -0.6
COL4A5-201ENST00000328300 IFNA16P05015 189 aa11.33□□□□□ -0.6
COL4A5-201ENST00000328300 SP140Q13342 867 aa11.33□□□□□ -0.6
COL4A5-201ENST00000328300 FGD3Q5JSP0 725 aa11.33□□□□□ -0.6
COL4A5-201ENST00000328300 EIF3MQ7L2H7 374 aaKnown RBP11.33□□□□□ -0.6
COL4A5-201ENST00000328300 ARNTL2Q8WYA1 636 aa11.33□□□□□ -0.6
COL4A5-201ENST00000328300 SMOQ99835 787 aa11.33□□□□□ -0.6
COL4A5-201ENST00000328300 CCNB1IP1Q9NPC3 277 aa11.33□□□□□ -0.6
COL4A5-201ENST00000328300 PIGVQ9NUD9 493 aa11.33□□□□□ -0.6
COL4A5-201ENST00000328300 THUMPD1Q9NXG2 353 aaKnown RBP11.33□□□□□ -0.6
COL4A5-201ENST00000328300 PCDHGA11Q9Y5H2 935 aa11.33□□□□□ -0.6
COL4A5-201ENST00000328300 MAST2Q6P0Q8 1798 aa11.33□□□□□ -0.6
COL4A5-201ENST00000328300 WNT9AO14904 365 aa11.33□□□□□ -0.6
COL4A5-201ENST00000328300 SSR2P43308 183 aa11.33□□□□□ -0.6
COL4A5-201ENST00000328300 CLCQ05315 142 aa11.33□□□□□ -0.6
COL4A5-201ENST00000328300 TCHHL1Q5QJ38 904 aaPredicted RBP11.33□□□□□ -0.6
COL4A5-201ENST00000328300 C10orf62Q5T681 223 aaPredicted RBP11.33□□□□□ -0.6
COL4A5-201ENST00000328300 MBLAC2Q68D91 279 aa11.33□□□□□ -0.6
COL4A5-201ENST00000328300 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.33□□□□□ -0.6
COL4A5-201ENST00000328300 CPSF7Q8N684 471 aaKnown RBP11.33□□□□□ -0.6
COL4A5-201ENST00000328300 OR14C36Q8NHC7 312 aa11.33□□□□□ -0.6
COL4A5-201ENST00000328300 NUS1Q96E22 293 aa11.33□□□□□ -0.6
COL4A5-201ENST00000328300 OR52E6Q96RD3 313 aa11.33□□□□□ -0.6
COL4A5-201ENST00000328300 ZNF184Q99676 751 aaPredicted RBP11.33□□□□□ -0.6
COL4A5-201ENST00000328300 SLITRK2Q9H156 845 aa11.33□□□□□ -0.6
COL4A5-201ENST00000328300 STMN3Q9NZ72 180 aa11.33□□□□□ -0.6
COL4A5-201ENST00000328300 TCRBV7S2A1N4TA0A589 114 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 CNMDO75829 334 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 HIST1H2ABP04908 130 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 PROZP22891 400 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 HOXD13P35453 343 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 CLDN10P78369 228 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 CYP4F8P98187 520 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 DPYSQ14117 519 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 HIST3H2AQ7L7L0 130 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 CACUL1Q86Y37 369 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 RELL1Q8IUW5 271 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 TBC1D21Q8IYX1 336 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 BPIFB1Q8TDL5 484 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 HIST1H2ACQ93077 130 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 KLHL32Q96NJ5 620 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 SLC38A2Q96QD8 506 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 TWNKQ96RR1 684 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 TDRD1Q9BXT4 1180 aaKnown RBP11.32□□□□□ -0.6
COL4A5-201ENST00000328300 MIR1-1HGQ9H1L0 117 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 USP29Q9HBJ7 922 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 ABCB8Q9NUT2 735 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 TDP1Q9NUW8 608 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 HS3ST4Q9Y661 456 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 NRP2O60462 931 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 FGF18O76093 207 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 AP2A2O94973 939 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 CYP11A1P05108 521 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 NR2F1P10589 423 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 TCF3P15923 654 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 CST5P28325 142 aaPredicted RBP11.32□□□□□ -0.6
COL4A5-201ENST00000328300 TAF5Q15542 800 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 CA9Q16790 459 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 CEP78Q5JTW2 689 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 SYPL2Q5VXT5 272 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 C15orf39Q6ZRI6 1047 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 CHCHD4Q8N4Q1 142 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 SCAMP5Q8TAC9 235 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 TRMT61BQ9BVS5 477 aaKnown RBP11.32□□□□□ -0.6
COL4A5-201ENST00000328300 IMP3Q9NV31 184 aaKnown RBP11.32□□□□□ -0.6
COL4A5-201ENST00000328300 FFAR3O14843 346 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 GPR42O15529 346 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 LYPLA1O75608 230 aaPredicted RBP11.32□□□□□ -0.6
COL4A5-201ENST00000328300 CPSF6Q16630 551 aaKnown RBP eCLIP11.32□□□□□ -0.6
COL4A5-201ENST00000328300 ANKRD22Q5VYY1 191 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 FSTL4Q6MZW2 842 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 PIK3C3Q8NEB9 887 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 C7orf57Q8NEG2 295 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 MTRRQ9UBK8 725 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 ZNF490Q9ULM2 529 aaPredicted RBP11.32□□□□□ -0.6
COL4A5-201ENST00000328300 AP3D1O14617 1153 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 RPL17P18621 184 aaKnown RBP11.32□□□□□ -0.6
COL4A5-201ENST00000328300 TALDO1P37837 337 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 KIR3DL1P43629 444 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 TM4SF4P48230 202 aa11.32□□□□□ -0.6
COL4A5-201ENST00000328300 ELF3P78545 371 aaPredicted RBP11.32□□□□□ -0.6
COL4A5-201ENST00000328300 GTF2H2Q13888 395 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms