RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 CAB39LQ9H9S4 337 aa10.15□□□□□ -0.79
VIPAS39-201ENST00000327028 MKS1Q9NXB0 559 aa10.15□□□□□ -0.79
VIPAS39-201ENST00000327028 GNPTGQ9UJJ9 305 aa10.15□□□□□ -0.79
VIPAS39-201ENST00000327028 FAM47DPA6NHR8 397 aa10.14□□□□□ -0.79
VIPAS39-201ENST00000327028 H3BMM5 538 aa10.14□□□□□ -0.79
VIPAS39-201ENST00000327028 K7ESF4 209 aa10.14□□□□□ -0.79
VIPAS39-201ENST00000327028 MPOP05164 745 aa10.14□□□□□ -0.79
VIPAS39-201ENST00000327028 PCCBP05166 539 aa10.14□□□□□ -0.79
VIPAS39-201ENST00000327028 PYGBP11216 843 aa10.14□□□□□ -0.79
VIPAS39-201ENST00000327028 CRABP2P29373 138 aa10.14□□□□□ -0.79
VIPAS39-201ENST00000327028 TYK2P29597 1187 aa10.14□□□□□ -0.79
VIPAS39-201ENST00000327028 CD6P30203 668 aa10.14□□□□□ -0.79
VIPAS39-201ENST00000327028 FMO4P31512 558 aa10.14□□□□□ -0.79
VIPAS39-201ENST00000327028 NSG1P42857 185 aa10.14□□□□□ -0.79
VIPAS39-201ENST00000327028 SLC12A2P55011 1212 aa10.14□□□□□ -0.79
VIPAS39-201ENST00000327028 CDKN2DP55273 166 aa10.14□□□□□ -0.79
VIPAS39-201ENST00000327028 TAS2R39P59534 338 aa10.14□□□□□ -0.79
VIPAS39-201ENST00000327028 RAB10P61026 200 aa10.14□□□□□ -0.79
VIPAS39-201ENST00000327028 B4GALNT1Q00973 533 aa10.14□□□□□ -0.79
VIPAS39-201ENST00000327028 IRF4Q15306 451 aa10.14□□□□□ -0.79
VIPAS39-201ENST00000327028 PNCKQ6P2M8 343 aa10.14□□□□□ -0.79
VIPAS39-201ENST00000327028 KRT222Q8N1A0 295 aa10.14□□□□□ -0.79
VIPAS39-201ENST00000327028 DENND6BQ8NEG7 585 aa10.14□□□□□ -0.79
VIPAS39-201ENST00000327028 TOE1Q96GM8 510 aaKnown RBP10.14□□□□□ -0.79
VIPAS39-201ENST00000327028 KLF6Q99612 283 aaPredicted RBP10.14□□□□□ -0.79
VIPAS39-201ENST00000327028 OLFM1Q99784 485 aa10.14□□□□□ -0.79
VIPAS39-201ENST00000327028 TPSD1Q9BZJ3 242 aa10.14□□□□□ -0.79
VIPAS39-201ENST00000327028 POPDC3Q9HBV1 291 aa10.14□□□□□ -0.79
VIPAS39-201ENST00000327028 PCMTD2Q9NV79 361 aa10.14□□□□□ -0.79
VIPAS39-201ENST00000327028 WSB2Q9NYS7 404 aaPredicted RBP10.14□□□□□ -0.79
VIPAS39-201ENST00000327028 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.14□□□□□ -0.79
VIPAS39-201ENST00000327028 CNOT6Q9ULM6 557 aaKnown RBP10.14□□□□□ -0.79
VIPAS39-201ENST00000327028 VWA7Q9Y334 891 aa10.14□□□□□ -0.79
VIPAS39-201ENST00000327028 IGHV1OR15-9A0A0B4J2B8 117 aa10.14□□□□□ -0.79
VIPAS39-201ENST00000327028 TMEM221A6NGB7 291 aa10.14□□□□□ -0.79
VIPAS39-201ENST00000327028 CFAP99D6REC4 459 aa10.14□□□□□ -0.79
VIPAS39-201ENST00000327028 M0R296 226 aa10.14□□□□□ -0.79
VIPAS39-201ENST00000327028 RALBP11234 206 aa10.14□□□□□ -0.79
VIPAS39-201ENST00000327028 BRAFP15056 766 aa10.14□□□□□ -0.79
VIPAS39-201ENST00000327028 CREB1P16220 341 aa10.14□□□□□ -0.79
VIPAS39-201ENST00000327028 STMN1P16949 149 aa10.14□□□□□ -0.79
VIPAS39-201ENST00000327028 NR1D1P20393 614 aa10.14□□□□□ -0.79
VIPAS39-201ENST00000327028 SAT1P21673 171 aa10.14□□□□□ -0.79
VIPAS39-201ENST00000327028 CD9P21926 228 aa10.14□□□□□ -0.79
VIPAS39-201ENST00000327028 AKT1P31749 480 aa10.14□□□□□ -0.79
VIPAS39-201ENST00000327028 HPDP32754 393 aaPredicted RBP10.14□□□□□ -0.79
VIPAS39-201ENST00000327028 CCR5P51681 352 aa10.14□□□□□ -0.79
VIPAS39-201ENST00000327028 TAF1BQ53T94 588 aaPredicted RBP10.14□□□□□ -0.79
VIPAS39-201ENST00000327028 MACC1Q6ZN28 852 aa10.14□□□□□ -0.79
VIPAS39-201ENST00000327028 CCDC91Q7Z6B0 441 aa10.14□□□□□ -0.79
VIPAS39-201ENST00000327028 BANPQ8N9N5 519 aa10.14□□□□□ -0.79
VIPAS39-201ENST00000327028 PLA2G15Q8NCC3 412 aa10.14□□□□□ -0.79
VIPAS39-201ENST00000327028 GDAP1Q8TB36 358 aa10.14□□□□□ -0.79
VIPAS39-201ENST00000327028 KCNJ9Q92806 393 aa10.14□□□□□ -0.79
VIPAS39-201ENST00000327028 KLK6Q92876 244 aa10.14□□□□□ -0.79
VIPAS39-201ENST00000327028 CENPTQ96BT3 561 aa10.14□□□□□ -0.79
VIPAS39-201ENST00000327028 DCUN1D1Q96GG9 259 aa10.14□□□□□ -0.79
VIPAS39-201ENST00000327028 APOPT1Q96IL0 206 aa10.14□□□□□ -0.79
VIPAS39-201ENST00000327028 LENG8Q96PV6 779 aaPredicted RBP10.14□□□□□ -0.79
VIPAS39-201ENST00000327028 SMG5Q9UPR3 1016 aaKnown RBP10.14□□□□□ -0.79
VIPAS39-201ENST00000327028 GOLGA8RI6L899 631 aa10.13□□□□□ -0.79
VIPAS39-201ENST00000327028 INPP4BO15327 924 aa10.13□□□□□ -0.79
VIPAS39-201ENST00000327028 PRPF4O43172 522 aaKnown RBP eCLIP10.13□□□□□ -0.79
VIPAS39-201ENST00000327028 LATO43561 262 aa10.13□□□□□ -0.79
VIPAS39-201ENST00000327028 PI15O43692 258 aa10.13□□□□□ -0.79
VIPAS39-201ENST00000327028 RHOBTB1O94844 696 aa10.13□□□□□ -0.79
VIPAS39-201ENST00000327028 AP2A2O94973 939 aa10.13□□□□□ -0.79
VIPAS39-201ENST00000327028 SLC25A14O95258 325 aaPredicted RBP10.13□□□□□ -0.79
VIPAS39-201ENST00000327028 MSH3P20585 1137 aa10.13□□□□□ -0.79
VIPAS39-201ENST00000327028 MAT2AP31153 395 aaKnown RBP10.13□□□□□ -0.79
VIPAS39-201ENST00000327028 PPP2R2AP63151 447 aa10.13□□□□□ -0.79
VIPAS39-201ENST00000327028 PDE1CQ14123 709 aaPredicted RBP10.13□□□□□ -0.79
VIPAS39-201ENST00000327028 KIAA0895LQ68EN5 471 aa10.13□□□□□ -0.79
VIPAS39-201ENST00000327028 PTRHD1Q6GMV3 140 aaKnown RBP10.13□□□□□ -0.79
VIPAS39-201ENST00000327028 CEP97Q8IW35 865 aa10.13□□□□□ -0.79
VIPAS39-201ENST00000327028 COX14Q96I36 57 aa10.13□□□□□ -0.79
VIPAS39-201ENST00000327028 ZCCHC2Q9C0B9 1178 aaKnown RBP10.13□□□□□ -0.79
VIPAS39-201ENST00000327028 MBNL1Q9NR56 388 aaKnown RBP10.13□□□□□ -0.79
VIPAS39-201ENST00000327028 ANKRD6Q9Y2G4 727 aa10.13□□□□□ -0.79
VIPAS39-201ENST00000327028 MED16Q9Y2X0 877 aa10.13□□□□□ -0.79
VIPAS39-201ENST00000327028 PRSS21Q9Y6M0 314 aa10.13□□□□□ -0.79
VIPAS39-201ENST00000327028 DOCK9Q9BZ29 2069 aa10.13□□□□□ -0.79
VIPAS39-201ENST00000327028 A0A096LPK6 155 aa10.13□□□□□ -0.79
VIPAS39-201ENST00000327028 RAD51BO15315 384 aa10.13□□□□□ -0.79
VIPAS39-201ENST00000327028 PHGDHO43175 533 aaKnown RBP10.13□□□□□ -0.79
VIPAS39-201ENST00000327028 TYROBPO43914 113 aa10.13□□□□□ -0.79
VIPAS39-201ENST00000327028 VPS26AO75436 327 aa10.13□□□□□ -0.79
VIPAS39-201ENST00000327028 PAK4O96013 591 aaPredicted RBP10.13□□□□□ -0.79
VIPAS39-201ENST00000327028 SLC35E2BP0CK96 405 aa10.13□□□□□ -0.79
VIPAS39-201ENST00000327028 HOXA6P31267 233 aa10.13□□□□□ -0.79
VIPAS39-201ENST00000327028 IGFALSP35858 605 aa10.13□□□□□ -0.79
VIPAS39-201ENST00000327028 TIAL1Q01085 375 aaKnown RBP eCLIP10.13□□□□□ -0.79
VIPAS39-201ENST00000327028 KHDC1Q4VXA5 237 aaKnown RBP10.13□□□□□ -0.79
VIPAS39-201ENST00000327028 RAPH1Q70E73 1250 aa10.13□□□□□ -0.79
VIPAS39-201ENST00000327028 HEATR4Q86WZ0 1026 aa10.13□□□□□ -0.79
VIPAS39-201ENST00000327028 FAM76AQ8TAV0 307 aa10.13□□□□□ -0.79
VIPAS39-201ENST00000327028 HIC2Q96JB3 615 aa10.13□□□□□ -0.79
VIPAS39-201ENST00000327028 SELENOSQ9BQE4 189 aa10.13□□□□□ -0.79
VIPAS39-201ENST00000327028 TEX101Q9BY14 249 aa10.13□□□□□ -0.79
VIPAS39-201ENST00000327028 PRMT8Q9NR22 394 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms