RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 KRBA1A5PL33 1030 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 WNT7AO00755 349 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 REM1O75628 298 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 SLITRK3O94933 977 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 FTH1P02794 183 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 HMBSP08397 361 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 CLTBP09497 229 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 MMP8P22894 467 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 GPR15P49685 360 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 CDH15P55291 814 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 NACC2Q96BF6 587 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 FEM1CQ96JP0 617 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 HERC2P3Q9BVR0 1158 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 TLE6Q9H808 572 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 ZMYM5Q9UJ78 669 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 HSPB11Q9Y547 144 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 SPTA1P02549 2419 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 NRAPQ86VF7 1730 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 CPSF4O95639 269 aaKnown RBP7.01□□□□□ -1.29
SMC1A-201ENST00000322213 INHBEP58166 350 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 DSTNP60981 165 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 BTBD16Q32M84 506 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 PIGGQ5H8A4 983 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 MPZL3Q6UWV2 235 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 DPY19L3Q6ZPD9 716 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 C4orf19Q8IY42 314 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 NIPA2Q8N8Q9 360 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 CELF1Q92879 486 aaKnown RBP7.01□□□□□ -1.29
SMC1A-201ENST00000322213 CRELD1Q96HD1 420 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 CDK5RAP1Q96SZ6 601 aaKnown RBP7.01□□□□□ -1.29
SMC1A-201ENST00000322213 DBNDD1Q9H9R9 158 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 POLE4Q9NR33 117 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 RCOR3Q9P2K3 495 aaPredicted RBP7.01□□□□□ -1.29
SMC1A-201ENST00000322213 CRLS1Q9UJA2 301 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 SNX6Q9UNH7 406 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 ANGPT4Q9Y264 503 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 KCNE2Q9Y6J6 123 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 GAKO14976 1311 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 OTCP00480 354 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 RPA4Q13156 261 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 CCNIQ14094 377 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 SPOUT1Q5T280 376 aaKnown RBP7.01□□□□□ -1.29
SMC1A-201ENST00000322213 R3HCC1LQ7Z5L2 792 aaKnown RBP7.01□□□□□ -1.29
SMC1A-201ENST00000322213 MILR1Q7Z6M3 343 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 DPP9Q86TI2 863 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 ITIH5Q86UX2 942 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 HS6ST3Q8IZP7 471 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 SPARTQ8N0X7 666 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 MOSPD2Q8NHP6 518 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 RNF157Q96PX1 679 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 CCDC106Q9BWC9 280 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 GRIP1Q9Y3R0 1128 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 KIF26AQ9ULI4 1882 aaPredicted RBP7.01□□□□□ -1.29
SMC1A-201ENST00000322213 TYROBPO43914 113 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 PGK1P00558 417 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 HNMTP50135 292 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 VPS26BQ4G0F5 336 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 EEPD1Q7L9B9 569 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 TNFAIP8L1Q8WVP5 186 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 STON2Q8WXE9 905 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 FAM84AQ96KN4 292 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 NPAP1Q9NZP6 1156 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 U3KQV3 271 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 COL14A1Q05707 1796 aaKnown RBP7.01□□□□□ -1.29
SMC1A-201ENST00000322213 AGRPO00253 132 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 ACOX3O15254 700 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 PLIN3O60664 434 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 ERCC2P18074 760 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 PPIBP23284 216 aaKnown RBP7.01□□□□□ -1.29
SMC1A-201ENST00000322213 ECHS1P30084 290 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 FMO3P31513 532 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 WSCD2Q2TBF2 565 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 MBLAC2Q68D91 279 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 NEPROQ6NW34 567 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 ACOT1Q86TX2 421 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 SLC15A3Q8IY34 581 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 PSKH2Q96QS6 385 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 ITPAQ9BY32 194 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 OCEL1Q9H607 264 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 GLS2Q9UI32 602 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 NR2E3Q9Y5X4 410 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 HTRA2O43464 458 aaPredicted RBP7.01□□□□□ -1.29
SMC1A-201ENST00000322213 NPPAP01160 153 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 LCN1P31025 176 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 TTPAP49638 278 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 ORC1Q13415 861 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 USF2Q15853 346 aaPredicted RBP7.01□□□□□ -1.29
SMC1A-201ENST00000322213 IDO2Q6ZQW0 420 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 NIPA1Q7RTP0 329 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 DGLUCYQ7Z3D6 616 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 PEG10Q86TG7 708 aaKnown RBP7.01□□□□□ -1.29
SMC1A-201ENST00000322213 NT5DC4Q86YG4 428 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 TICAM1Q8IUC6 712 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 BRSK2Q8IWQ3 736 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 PPM1MQ96MI6 270 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 FEM1AQ9BSK4 669 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 CEP41Q9BYV8 373 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 POLR3BQ9NW08 1133 aaPredicted RBP7.01□□□□□ -1.29
SMC1A-201ENST00000322213 SLC25A13Q9UJS0 675 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 TMEM5Q9Y2B1 443 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms