RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 SUN2Q9UH99 717 aa17.76■□□□□ 0.43
PRKCB-202ENST00000321728 ZSWIM8A7E2V4 1837 aa17.76■□□□□ 0.43
PRKCB-202ENST00000321728 TYW5A2RUC4 315 aaKnown RBP17.76■□□□□ 0.43
PRKCB-202ENST00000321728 OR51F1A6NGY5 319 aa17.76■□□□□ 0.43
PRKCB-202ENST00000321728 G3V2T6 193 aa17.76■□□□□ 0.43
PRKCB-202ENST00000321728 MAFKO60675 156 aa17.76■□□□□ 0.43
PRKCB-202ENST00000321728 CD1DP15813 335 aa17.76■□□□□ 0.43
PRKCB-202ENST00000321728 TGM1P22735 817 aa17.76■□□□□ 0.43
PRKCB-202ENST00000321728 ALDH4A1P30038 563 aa17.76■□□□□ 0.43
PRKCB-202ENST00000321728 TPTEP56180 551 aa17.76■□□□□ 0.43
PRKCB-202ENST00000321728 LILRA4P59901 499 aa17.76■□□□□ 0.43
PRKCB-202ENST00000321728 ZNF33AQ06730 810 aa17.76■□□□□ 0.43
PRKCB-202ENST00000321728 CRY1Q16526 586 aa17.76■□□□□ 0.43
PRKCB-202ENST00000321728 FAM98BQ52LJ0 330 aaKnown RBP17.76■□□□□ 0.43
PRKCB-202ENST00000321728 SCIMPQ6UWF3 145 aa17.76■□□□□ 0.43
PRKCB-202ENST00000321728 ALKAL1Q6UXT8 129 aa17.76■□□□□ 0.43
PRKCB-202ENST00000321728 TMEM199Q8N511 208 aa17.76■□□□□ 0.43
PRKCB-202ENST00000321728 AURKBQ96GD4 344 aaPredicted RBP17.76■□□□□ 0.43
PRKCB-202ENST00000321728 DNMT3BQ9UBC3 853 aaKnown RBP17.76■□□□□ 0.43
PRKCB-202ENST00000321728 NDUFS2O75306 463 aa17.75■□□□□ 0.43
PRKCB-202ENST00000321728 NADKO95544 446 aaPredicted RBP17.75■□□□□ 0.43
PRKCB-202ENST00000321728 POLR2JP52435 117 aaKnown RBP17.75■□□□□ 0.43
PRKCB-202ENST00000321728 ZNF135P52742 658 aaPredicted RBP17.75■□□□□ 0.43
PRKCB-202ENST00000321728 CHRNB3Q05901 458 aa17.75■□□□□ 0.43
PRKCB-202ENST00000321728 OR4D1Q15615 310 aa17.75■□□□□ 0.43
PRKCB-202ENST00000321728 CTU2Q2VPK5 515 aaKnown RBP17.75■□□□□ 0.43
PRKCB-202ENST00000321728 PM20D1Q6GTS8 502 aa17.75■□□□□ 0.43
PRKCB-202ENST00000321728 ARHGAP12Q8IWW6 846 aa17.75■□□□□ 0.43
PRKCB-202ENST00000321728 PGAP3Q96FM1 320 aaPredicted RBP17.75■□□□□ 0.43
PRKCB-202ENST00000321728 NODALQ96S42 347 aa17.75■□□□□ 0.43
PRKCB-202ENST00000321728 LRRC3Q9BY71 257 aa17.75■□□□□ 0.43
PRKCB-202ENST00000321728 SLC39A8Q9C0K1 460 aa17.75■□□□□ 0.43
PRKCB-202ENST00000321728 CNGB3Q9NQW8 809 aa17.75■□□□□ 0.43
PRKCB-202ENST00000321728 MARCH4Q9P2E8 410 aaPredicted RBP17.75■□□□□ 0.43
PRKCB-202ENST00000321728 EVLQ9UI08 416 aaPredicted RBP17.75■□□□□ 0.43
PRKCB-202ENST00000321728 POU2F3Q9UKI9 436 aa17.75■□□□□ 0.43
PRKCB-202ENST00000321728 FNDC1Q4ZHG4 1894 aaPredicted RBP17.75■□□□□ 0.43
PRKCB-202ENST00000321728 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.75■□□□□ 0.43
PRKCB-202ENST00000321728 RAP2AP10114 183 aa17.75■□□□□ 0.43
PRKCB-202ENST00000321728 WARSP23381 471 aaKnown RBP17.75■□□□□ 0.43
PRKCB-202ENST00000321728 PIGAP37287 484 aa17.75■□□□□ 0.43
PRKCB-202ENST00000321728 GP2P55259 537 aaKnown RBP17.75■□□□□ 0.43
PRKCB-202ENST00000321728 NOTUMQ6P988 496 aa17.75■□□□□ 0.43
PRKCB-202ENST00000321728 PLEKHG7Q6ZR37 379 aa17.75■□□□□ 0.43
PRKCB-202ENST00000321728 SCML4Q8N228 414 aa17.75■□□□□ 0.43
PRKCB-202ENST00000321728 OR13J1Q8NGT2 312 aa17.75■□□□□ 0.43
PRKCB-202ENST00000321728 TSPEARQ8WU66 669 aa17.75■□□□□ 0.43
PRKCB-202ENST00000321728 GLMNQ92990 594 aa17.75■□□□□ 0.43
PRKCB-202ENST00000321728 RBPJLQ9UBG7 517 aa17.75■□□□□ 0.43
PRKCB-202ENST00000321728 MAGEL2Q9UJ55 1249 aa17.75■□□□□ 0.43
PRKCB-202ENST00000321728 ATP11BQ9Y2G3 1177 aa17.75■□□□□ 0.43
PRKCB-202ENST00000321728 A8MU76 341 aa17.75■□□□□ 0.43
PRKCB-202ENST00000321728 AXIN1O15169 862 aa17.75■□□□□ 0.43
PRKCB-202ENST00000321728 VPS4BO75351 444 aa17.75■□□□□ 0.43
PRKCB-202ENST00000321728 TULP3O75386 442 aa17.75■□□□□ 0.43
PRKCB-202ENST00000321728 CNTN5O94779 1100 aa17.75■□□□□ 0.43
PRKCB-202ENST00000321728 S1PR4O95977 384 aa17.75■□□□□ 0.43
PRKCB-202ENST00000321728 S100A1P23297 94 aa17.75■□□□□ 0.43
PRKCB-202ENST00000321728 RCVRNP35243 200 aa17.75■□□□□ 0.43
PRKCB-202ENST00000321728 ADCYAP1R1P41586 468 aa17.75■□□□□ 0.43
PRKCB-202ENST00000321728 SERPINH1P50454 418 aaKnown RBP17.75■□□□□ 0.43
PRKCB-202ENST00000321728 ARHGAP1Q07960 439 aa17.75■□□□□ 0.43
PRKCB-202ENST00000321728 CD47Q08722 323 aa17.75■□□□□ 0.43
PRKCB-202ENST00000321728 ITKQ08881 620 aa17.75■□□□□ 0.43
PRKCB-202ENST00000321728 NOL9Q5SY16 702 aaKnown RBP17.75■□□□□ 0.43
PRKCB-202ENST00000321728 KIAA0319Q5VV43 1072 aa17.75■□□□□ 0.43
PRKCB-202ENST00000321728 ADCK1Q86TW2 530 aa17.75■□□□□ 0.43
PRKCB-202ENST00000321728 TAC4Q86UU9 113 aa17.75■□□□□ 0.43
PRKCB-202ENST00000321728 HS3ST5Q8IZT8 346 aa17.75■□□□□ 0.43
PRKCB-202ENST00000321728 DTWD1Q8N5C7 304 aa17.75■□□□□ 0.43
PRKCB-202ENST00000321728 NDNFQ8TB73 568 aa17.75■□□□□ 0.43
PRKCB-202ENST00000321728 EFHD2Q96C19 240 aaPredicted RBP17.75■□□□□ 0.43
PRKCB-202ENST00000321728 WDR90Q96KV7 1748 aa17.75■□□□□ 0.43
PRKCB-202ENST00000321728 PPM1MQ96MI6 270 aa17.75■□□□□ 0.43
PRKCB-202ENST00000321728 SMOQ99835 787 aa17.75■□□□□ 0.43
PRKCB-202ENST00000321728 EXD2Q9NVH0 621 aa17.75■□□□□ 0.43
PRKCB-202ENST00000321728 ZNF229Q9UJW7 825 aa17.75■□□□□ 0.43
PRKCB-202ENST00000321728 TNPO2O14787 897 aaKnown RBP17.74■□□□□ 0.43
PRKCB-202ENST00000321728 SLC26A3P40879 764 aa17.74■□□□□ 0.43
PRKCB-202ENST00000321728 MTPNP58546 118 aa17.74■□□□□ 0.43
PRKCB-202ENST00000321728 EMX2Q04743 252 aa17.74■□□□□ 0.43
PRKCB-202ENST00000321728 YWHAHQ04917 246 aaPredicted RBP17.74■□□□□ 0.43
PRKCB-202ENST00000321728 CLCQ05315 142 aa17.74■□□□□ 0.43
PRKCB-202ENST00000321728 NANOGNBQ7Z5D8 188 aa17.74■□□□□ 0.43
PRKCB-202ENST00000321728 SPATA19Q7Z5L4 167 aa17.74■□□□□ 0.43
PRKCB-202ENST00000321728 SLC22A16Q86VW1 577 aa17.74■□□□□ 0.43
PRKCB-202ENST00000321728 VMP1Q96GC9 406 aa17.74■□□□□ 0.43
PRKCB-202ENST00000321728 OSMRQ99650 979 aa17.74■□□□□ 0.43
PRKCB-202ENST00000321728 AMBRA1Q9C0C7 1298 aa17.74■□□□□ 0.43
PRKCB-202ENST00000321728 RNF39Q9H2S5 420 aa17.74■□□□□ 0.43
PRKCB-202ENST00000321728 SIAEQ9HAT2 523 aa17.74■□□□□ 0.43
PRKCB-202ENST00000321728 AIG1Q9NVV5 245 aa17.74■□□□□ 0.43
PRKCB-202ENST00000321728 ANKMY1Q9P2S6 941 aa17.74■□□□□ 0.43
PRKCB-202ENST00000321728 CSADQ9Y600 493 aa17.74■□□□□ 0.43
PRKCB-202ENST00000321728 ZBBXA8MT70 800 aa17.74■□□□□ 0.43
PRKCB-202ENST00000321728 GNGT2O14610 69 aa17.74■□□□□ 0.43
PRKCB-202ENST00000321728 SOAT2O75908 522 aa17.74■□□□□ 0.43
PRKCB-202ENST00000321728 ENO2P09104 434 aaPredicted RBP17.74■□□□□ 0.43
PRKCB-202ENST00000321728 BMP4P12644 408 aa17.74■□□□□ 0.43
PRKCB-202ENST00000321728 ARSDP51689 593 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms