RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 A0A1W2PPM1 405 aa15.24■□□□□ 0.03
PDLIM5-202ENST00000318007 RGSL1A5PLK6 1076 aa15.24■□□□□ 0.03
PDLIM5-202ENST00000318007 GOLGA6L10A6NI86 522 aa15.24■□□□□ 0.03
PDLIM5-202ENST00000318007 TRIM49D1C9J1S8 452 aa15.24■□□□□ 0.03
PDLIM5-202ENST00000318007 LATO43561 262 aa15.24■□□□□ 0.03
PDLIM5-202ENST00000318007 MYZAPP0CAP1 466 aa15.24■□□□□ 0.03
PDLIM5-202ENST00000318007 C7P10643 843 aa15.24■□□□□ 0.03
PDLIM5-202ENST00000318007 OGNP20774 298 aaKnown RBP15.24■□□□□ 0.03
PDLIM5-202ENST00000318007 LEPRP48357 1165 aaKnown RBP15.24■□□□□ 0.03
PDLIM5-202ENST00000318007 DPTQ07507 201 aa15.24■□□□□ 0.03
PDLIM5-202ENST00000318007 GPR33Q49SQ1 333 aa15.24■□□□□ 0.03
PDLIM5-202ENST00000318007 CTSL3PQ5NE16 218 aa15.24■□□□□ 0.03
PDLIM5-202ENST00000318007 TPRG1LQ5T0D9 272 aa15.24■□□□□ 0.03
PDLIM5-202ENST00000318007 ZNF549Q6P9A3 640 aa15.24■□□□□ 0.03
PDLIM5-202ENST00000318007 CYS1Q717R9 158 aa15.24■□□□□ 0.03
PDLIM5-202ENST00000318007 DCLK2Q8N568 766 aa15.24■□□□□ 0.03
PDLIM5-202ENST00000318007 GPR150Q8NGU9 434 aa15.24■□□□□ 0.03
PDLIM5-202ENST00000318007 GABPB2Q8TAK5 448 aaPredicted RBP15.24■□□□□ 0.03
PDLIM5-202ENST00000318007 DCUN1D1Q96GG9 259 aa15.24■□□□□ 0.03
PDLIM5-202ENST00000318007 CLPBQ9H078 707 aa15.24■□□□□ 0.03
PDLIM5-202ENST00000318007 GALPQ9UBC7 116 aa15.24■□□□□ 0.03
PDLIM5-202ENST00000318007 TRBV5-4A0A0C4DH59 114 aa15.23■□□□□ 0.03
PDLIM5-202ENST00000318007 TMEM202A6NGA9 273 aa15.23■□□□□ 0.03
PDLIM5-202ENST00000318007 FPGTO14772 594 aa15.23■□□□□ 0.03
PDLIM5-202ENST00000318007 RGS16O15492 202 aaPredicted RBP15.23■□□□□ 0.03
PDLIM5-202ENST00000318007 PHGDHO43175 533 aaKnown RBP15.23■□□□□ 0.03
PDLIM5-202ENST00000318007 CDH16O75309 829 aa15.23■□□□□ 0.03
PDLIM5-202ENST00000318007 TRIM16O95361 564 aa15.23■□□□□ 0.03
PDLIM5-202ENST00000318007 TOP3BO95985 862 aaKnown RBP15.23■□□□□ 0.03
PDLIM5-202ENST00000318007 AKT2P31751 481 aa15.23■□□□□ 0.03
PDLIM5-202ENST00000318007 DHPSP49366 369 aaPredicted RBP15.23■□□□□ 0.03
PDLIM5-202ENST00000318007 CTSCP53634 463 aa15.23■□□□□ 0.03
PDLIM5-202ENST00000318007 CDKN2DP55273 166 aa15.23■□□□□ 0.03
PDLIM5-202ENST00000318007 TMEM115Q12893 351 aaPredicted RBP15.23■□□□□ 0.03
PDLIM5-202ENST00000318007 FRG1Q14331 258 aaKnown RBP15.23■□□□□ 0.03
PDLIM5-202ENST00000318007 PTRHD1Q6GMV3 140 aaKnown RBP15.23■□□□□ 0.03
PDLIM5-202ENST00000318007 ADGRD1Q6QNK2 874 aa15.23■□□□□ 0.03
PDLIM5-202ENST00000318007 GCNT7Q6ZNI0 430 aa15.23■□□□□ 0.03
PDLIM5-202ENST00000318007 RD3Q7Z3Z2 195 aa15.23■□□□□ 0.03
PDLIM5-202ENST00000318007 LONP2Q86WA8 852 aa15.23■□□□□ 0.03
PDLIM5-202ENST00000318007 TRAPPC5Q8IUR0 188 aa15.23■□□□□ 0.03
PDLIM5-202ENST00000318007 RBFAQ8N0V3 343 aa15.23■□□□□ 0.03
PDLIM5-202ENST00000318007 SPATA6LQ8N4H0 392 aa15.23■□□□□ 0.03
PDLIM5-202ENST00000318007 LKAAEAR1Q8TD35 194 aa15.23■□□□□ 0.03
PDLIM5-202ENST00000318007 ARL8AQ96BM9 186 aa15.23■□□□□ 0.03
PDLIM5-202ENST00000318007 HIC2Q96JB3 615 aa15.23■□□□□ 0.03
PDLIM5-202ENST00000318007 BMFQ96LC9 184 aa15.23■□□□□ 0.03
PDLIM5-202ENST00000318007 OLFM1Q99784 485 aa15.23■□□□□ 0.03
PDLIM5-202ENST00000318007 DHRS4Q9BTZ2 278 aa15.23■□□□□ 0.03
PDLIM5-202ENST00000318007 CDH19Q9H159 772 aa15.23■□□□□ 0.03
PDLIM5-202ENST00000318007 CCDC68Q9H2F9 335 aa15.23■□□□□ 0.03
PDLIM5-202ENST00000318007 ZDHHC3Q9NYG2 299 aa15.23■□□□□ 0.03
PDLIM5-202ENST00000318007 ATXN10Q9UBB4 475 aa15.23■□□□□ 0.03
PDLIM5-202ENST00000318007 A0A1W2PPC4 97 aa15.22■□□□□ 0.03
PDLIM5-202ENST00000318007 E5RI56 91 aa15.22■□□□□ 0.03
PDLIM5-202ENST00000318007 TPP1O14773 563 aa15.22■□□□□ 0.03
PDLIM5-202ENST00000318007 HRO43593 1189 aa15.22■□□□□ 0.03
PDLIM5-202ENST00000318007 CDK14O94921 469 aa15.22■□□□□ 0.03
PDLIM5-202ENST00000318007 ZNF7P17097 686 aaPredicted RBP15.22■□□□□ 0.03
PDLIM5-202ENST00000318007 CHRM3P20309 590 aa15.22■□□□□ 0.03
PDLIM5-202ENST00000318007 ITPKAP23677 461 aa15.22■□□□□ 0.03
PDLIM5-202ENST00000318007 SPRP35270 261 aaPredicted RBP15.22■□□□□ 0.03
PDLIM5-202ENST00000318007 LIMK2P53671 638 aa15.22■□□□□ 0.03
PDLIM5-202ENST00000318007 USP10Q14694 798 aaKnown RBP15.22■□□□□ 0.03
PDLIM5-202ENST00000318007 ZNF542PQ5EBM4 170 aa15.22■□□□□ 0.03
PDLIM5-202ENST00000318007 GRTP1Q5TC63 336 aa15.22■□□□□ 0.03
PDLIM5-202ENST00000318007 ARMC3Q5W041 872 aa15.22■□□□□ 0.03
PDLIM5-202ENST00000318007 LRIG3Q6UXM1 1119 aa15.22■□□□□ 0.03
PDLIM5-202ENST00000318007 MAMSTRQ6ZN01 415 aa15.22■□□□□ 0.03
PDLIM5-202ENST00000318007 PRR23BQ6ZRT6 265 aa15.22■□□□□ 0.03
PDLIM5-202ENST00000318007 RAPH1Q70E73 1250 aa15.22■□□□□ 0.03
PDLIM5-202ENST00000318007 ZNF765Q7L2R6 523 aa15.22■□□□□ 0.03
PDLIM5-202ENST00000318007 SRRM1Q8IYB3 904 aaKnown RBP15.22■□□□□ 0.03
PDLIM5-202ENST00000318007 C4orf33Q8N1A6 199 aa15.22■□□□□ 0.03
PDLIM5-202ENST00000318007 GOLGA6L1Q8N7Z2 621 aa15.22■□□□□ 0.03
PDLIM5-202ENST00000318007 RASGEF1AQ8N9B8 481 aa15.22■□□□□ 0.03
PDLIM5-202ENST00000318007 OR13H1Q8NG92 308 aa15.22■□□□□ 0.03
PDLIM5-202ENST00000318007 ULK4Q96C45 1275 aa15.22■□□□□ 0.03
PDLIM5-202ENST00000318007 BIRC8Q96P09 236 aa15.22■□□□□ 0.03
PDLIM5-202ENST00000318007 TTC1Q99614 292 aa15.22■□□□□ 0.03
PDLIM5-202ENST00000318007 RHOJQ9H4E5 214 aa15.22■□□□□ 0.03
PDLIM5-202ENST00000318007 TM7SF3Q9NS93 570 aa15.22■□□□□ 0.03
PDLIM5-202ENST00000318007 NSMCE4AQ9NXX6 385 aa15.22■□□□□ 0.03
PDLIM5-202ENST00000318007 SLC24A2Q9UI40 661 aa15.22■□□□□ 0.03
PDLIM5-202ENST00000318007 THADAQ6YHU6 1953 aa15.22■□□□□ 0.03
PDLIM5-202ENST00000318007 AGAP14A8MT82 685 aa15.22■□□□□ 0.03
PDLIM5-202ENST00000318007 METTL12A8MUP2 240 aa15.22■□□□□ 0.03
PDLIM5-202ENST00000318007 PRMT5O14744 637 aaPredicted RBP15.22■□□□□ 0.03
PDLIM5-202ENST00000318007 CREB1P16220 341 aa15.22■□□□□ 0.03
PDLIM5-202ENST00000318007 ZNF8P17098 575 aaPredicted RBP15.22■□□□□ 0.03
PDLIM5-202ENST00000318007 PTPN5P54829 565 aa15.22■□□□□ 0.03
PDLIM5-202ENST00000318007 PPM1JQ5JR12 505 aa15.22■□□□□ 0.03
PDLIM5-202ENST00000318007 CERS6Q6ZMG9 384 aa15.22■□□□□ 0.03
PDLIM5-202ENST00000318007 Q6ZSR6 202 aa15.22■□□□□ 0.03
PDLIM5-202ENST00000318007 KIAA0408Q6ZU52 694 aa15.22■□□□□ 0.03
PDLIM5-202ENST00000318007 CEP68Q76N32 757 aa15.22■□□□□ 0.03
PDLIM5-202ENST00000318007 CEP97Q8IW35 865 aa15.22■□□□□ 0.03
PDLIM5-202ENST00000318007 DDHD1Q8NEL9 900 aa15.22■□□□□ 0.03
PDLIM5-202ENST00000318007 FOXJ1Q92949 421 aa15.22■□□□□ 0.03
PDLIM5-202ENST00000318007 SGSM3Q96HU1 749 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms