RNA–Protein interactions for RNA: ENST00000317868.8

ATG4C-201, Transcript of autophagy related 4C cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4C, Length 2,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-201ENST00000317868 LINC00032P0C843 101 aa13.67□□□□□ -0.22
ATG4C-201ENST00000317868 AGTR2P50052 363 aa13.67□□□□□ -0.22
ATG4C-201ENST00000317868 BNIP2Q12982 314 aa13.67□□□□□ -0.22
ATG4C-201ENST00000317868 ZNF177Q13360 481 aaPredicted RBP13.67□□□□□ -0.22
ATG4C-201ENST00000317868 BFSP2Q13515 415 aa13.67□□□□□ -0.22
ATG4C-201ENST00000317868 PDCD4Q53EL6 469 aaKnown RBP13.67□□□□□ -0.22
ATG4C-201ENST00000317868 INO80DQ53TQ3 878 aaPredicted RBP13.67□□□□□ -0.22
ATG4C-201ENST00000317868 MTX3Q5HYI7 312 aa13.67□□□□□ -0.22
ATG4C-201ENST00000317868 UGT3A1Q6NUS8 523 aa13.67□□□□□ -0.22
ATG4C-201ENST00000317868 LAYNQ6UX15 382 aa13.67□□□□□ -0.22
ATG4C-201ENST00000317868 EFL1Q7Z2Z2 1120 aaKnown RBP13.67□□□□□ -0.22
ATG4C-201ENST00000317868 PTRH1Q86Y79 214 aaKnown RBP13.67□□□□□ -0.22
ATG4C-201ENST00000317868 LRRC43Q8N309 656 aa13.67□□□□□ -0.22
ATG4C-201ENST00000317868 SIDT2Q8NBJ9 832 aaKnown RBP13.67□□□□□ -0.22
ATG4C-201ENST00000317868 OR2T11Q8NH01 316 aa13.67□□□□□ -0.22
ATG4C-201ENST00000317868 SEPT8Q92599 483 aa13.67□□□□□ -0.22
ATG4C-201ENST00000317868 LRRC58Q96CX6 371 aa13.67□□□□□ -0.22
ATG4C-201ENST00000317868 EID2BQ96D98 161 aa13.67□□□□□ -0.22
ATG4C-201ENST00000317868 PLEKHG4BQ96PX9 1271 aa13.67□□□□□ -0.22
ATG4C-201ENST00000317868 SPON2Q9BUD6 331 aa13.67□□□□□ -0.22
ATG4C-201ENST00000317868 ADGRE3Q9BY15 652 aa13.67□□□□□ -0.22
ATG4C-201ENST00000317868 CCDC68Q9H2F9 335 aa13.67□□□□□ -0.22
ATG4C-201ENST00000317868 AFF4Q9UHB7 1163 aaKnown RBP13.67□□□□□ -0.22
ATG4C-201ENST00000317868 LZTS1Q9Y250 596 aa13.67□□□□□ -0.22
ATG4C-201ENST00000317868 BTRCQ9Y297 605 aa13.67□□□□□ -0.22
ATG4C-201ENST00000317868 RNF11Q9Y3C5 154 aa13.67□□□□□ -0.22
ATG4C-201ENST00000317868 ASB1Q9Y576 335 aa13.67□□□□□ -0.22
ATG4C-201ENST00000317868 PCDHGC4Q9Y5F7 938 aa13.67□□□□□ -0.22
ATG4C-201ENST00000317868 COMMD3-BMI1R4GMX3 469 aa13.67□□□□□ -0.22
ATG4C-201ENST00000317868 A0A1W2PP18 115 aa13.67□□□□□ -0.22
ATG4C-201ENST00000317868 GREM1O60565 184 aa13.67□□□□□ -0.22
ATG4C-201ENST00000317868 EEDO75530 441 aaKnown RBP13.67□□□□□ -0.22
ATG4C-201ENST00000317868 LATS1O95835 1130 aa13.67□□□□□ -0.22
ATG4C-201ENST00000317868 RPL5P46777 297 aaKnown RBP13.67□□□□□ -0.22
ATG4C-201ENST00000317868 TMEM125Q96AQ2 219 aa13.67□□□□□ -0.22
ATG4C-201ENST00000317868 TUBGCP3Q96CW5 907 aa13.67□□□□□ -0.22
ATG4C-201ENST00000317868 CNBD2Q96M20 576 aa13.67□□□□□ -0.22
ATG4C-201ENST00000317868 ZNF512Q96ME7 567 aaPredicted RBP13.67□□□□□ -0.22
ATG4C-201ENST00000317868 ZNF382Q96SR6 550 aa13.67□□□□□ -0.22
ATG4C-201ENST00000317868 OSBPL11Q9BXB4 747 aa13.67□□□□□ -0.22
ATG4C-201ENST00000317868 TRIM54Q9BYV2 358 aa13.67□□□□□ -0.22
ATG4C-201ENST00000317868 IL17CQ9P0M4 197 aa13.67□□□□□ -0.22
ATG4C-201ENST00000317868 TBKBP1A7MCY6 615 aa13.66□□□□□ -0.22
ATG4C-201ENST00000317868 BTN3A1O00481 513 aa13.66□□□□□ -0.22
ATG4C-201ENST00000317868 ESR1P03372 595 aa13.66□□□□□ -0.22
ATG4C-201ENST00000317868 CYBBP04839 570 aa13.66□□□□□ -0.22
ATG4C-201ENST00000317868 FAM58BPP0C7Q3 252 aa13.66□□□□□ -0.22
ATG4C-201ENST00000317868 DIO3P55073 304 aa13.66□□□□□ -0.22
ATG4C-201ENST00000317868 ECT2LQ008S8 904 aa13.66□□□□□ -0.22
ATG4C-201ENST00000317868 PITRM1Q5JRX3 1037 aa13.66□□□□□ -0.22
ATG4C-201ENST00000317868 RNF219Q5W0B1 726 aaPredicted RBP13.66□□□□□ -0.22
ATG4C-201ENST00000317868 PPP4R4Q6NUP7 873 aa13.66□□□□□ -0.22
ATG4C-201ENST00000317868 CYP2R1Q6VVX0 501 aa13.66□□□□□ -0.22
ATG4C-201ENST00000317868 DDIASQ8IXT1 998 aa13.66□□□□□ -0.22
ATG4C-201ENST00000317868 FAM110BQ8TC76 370 aa13.66□□□□□ -0.22
ATG4C-201ENST00000317868 EME1Q96AY2 570 aa13.66□□□□□ -0.22
ATG4C-201ENST00000317868 ALG14Q96F25 216 aa13.66□□□□□ -0.22
ATG4C-201ENST00000317868 TEX37Q96LM6 180 aa13.66□□□□□ -0.22
ATG4C-201ENST00000317868 SLC29A1Q99808 456 aa13.66□□□□□ -0.22
ATG4C-201ENST00000317868 CCT7Q99832 543 aa13.66□□□□□ -0.22
ATG4C-201ENST00000317868 CLSTN3Q9BQT9 956 aa13.66□□□□□ -0.22
ATG4C-201ENST00000317868 GKN1Q9NS71 199 aa13.66□□□□□ -0.22
ATG4C-201ENST00000317868 DUS2Q9NX74 493 aaKnown RBP13.66□□□□□ -0.22
ATG4C-201ENST00000317868 ACTR3BQ9P1U1 418 aa13.66□□□□□ -0.22
ATG4C-201ENST00000317868 LRFN2Q9ULH4 789 aa13.66□□□□□ -0.22
ATG4C-201ENST00000317868 ABT1Q9ULW3 272 aaKnown RBP13.66□□□□□ -0.22
ATG4C-201ENST00000317868 CBX4O00257 560 aa13.66□□□□□ -0.22
ATG4C-201ENST00000317868 GAPDHSO14556 408 aaPredicted RBP13.66□□□□□ -0.22
ATG4C-201ENST00000317868 CXCL10P02778 98 aa13.66□□□□□ -0.22
ATG4C-201ENST00000317868 HSPA8P11142 646 aaKnown RBP13.66□□□□□ -0.22
ATG4C-201ENST00000317868 PTGER3P43115 390 aa13.66□□□□□ -0.22
ATG4C-201ENST00000317868 GALNT4Q8N4A0 578 aa13.66□□□□□ -0.22
ATG4C-201ENST00000317868 EEF1AKMT1Q8WVE0 214 aa13.66□□□□□ -0.22
ATG4C-201ENST00000317868 CANT1Q8WVQ1 401 aa13.66□□□□□ -0.22
ATG4C-201ENST00000317868 SEMA6AQ9H2E6 1030 aa13.66□□□□□ -0.22
ATG4C-201ENST00000317868 MUC13Q9H3R2 512 aa13.66□□□□□ -0.22
ATG4C-201ENST00000317868 GRXCR2A6NFK2 248 aa13.65□□□□□ -0.22
ATG4C-201ENST00000317868 ANGPT2O15123 496 aa13.65□□□□□ -0.22
ATG4C-201ENST00000317868 INHAP05111 366 aa13.65□□□□□ -0.22
ATG4C-201ENST00000317868 RPL17P18621 184 aaKnown RBP13.65□□□□□ -0.22
ATG4C-201ENST00000317868 OR1D2P34982 312 aa13.65□□□□□ -0.22
ATG4C-201ENST00000317868 NHSL2Q5HYW2 709 aa13.65□□□□□ -0.22
ATG4C-201ENST00000317868 AARS2Q5JTZ9 985 aaKnown RBP13.65□□□□□ -0.22
ATG4C-201ENST00000317868 INTS11Q5TA45 600 aaKnown RBP13.65□□□□□ -0.22
ATG4C-201ENST00000317868 TMEM150AQ86TG1 271 aa13.65□□□□□ -0.22
ATG4C-201ENST00000317868 FAM217AQ8IXS0 508 aa13.65□□□□□ -0.22
ATG4C-201ENST00000317868 ISG20Q96AZ6 181 aaKnown RBP13.65□□□□□ -0.22
ATG4C-201ENST00000317868 AGPAT4Q9NRZ5 378 aa13.65□□□□□ -0.22
ATG4C-201ENST00000317868 GID8Q9NWU2 228 aa13.65□□□□□ -0.22
ATG4C-201ENST00000317868 NUDT4Q9NZJ9 180 aa13.65□□□□□ -0.22
ATG4C-201ENST00000317868 TRMT6Q9UJA5 497 aaKnown RBP13.65□□□□□ -0.22
ATG4C-201ENST00000317868 TIMM22Q9Y584 194 aa13.65□□□□□ -0.22
ATG4C-201ENST00000317868 TCRBV5S2A0A599 114 aa13.65□□□□□ -0.22
ATG4C-201ENST00000317868 C2orf78A6NCI8 922 aa13.65□□□□□ -0.22
ATG4C-201ENST00000317868 ZNF839A8K0R7 811 aa13.65□□□□□ -0.22
ATG4C-201ENST00000317868 DLGAP1O14490 977 aa13.65□□□□□ -0.22
ATG4C-201ENST00000317868 VILLO15195 856 aa13.65□□□□□ -0.22
ATG4C-201ENST00000317868 CSPG5O95196 566 aa13.65□□□□□ -0.22
ATG4C-201ENST00000317868 PGM3O95394 542 aa13.65□□□□□ -0.22
ATG4C-201ENST00000317868 GRIA3P42263 894 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms