RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 CDK14O94921 469 aa17.54■□□□□ 0.4
TPM1-203ENST00000317516 NDUFA10O95299 355 aa17.54■□□□□ 0.4
TPM1-203ENST00000317516 EML2O95834 649 aa17.54■□□□□ 0.4
TPM1-203ENST00000317516 CD68P34810 354 aaPredicted RBP17.54■□□□□ 0.4
TPM1-203ENST00000317516 ETV5P41161 510 aa17.54■□□□□ 0.4
TPM1-203ENST00000317516 CETN2P41208 172 aa17.54■□□□□ 0.4
TPM1-203ENST00000317516 ADCY2Q08462 1091 aa17.54■□□□□ 0.4
TPM1-203ENST00000317516 MPP3Q13368 585 aa17.54■□□□□ 0.4
TPM1-203ENST00000317516 NFATC2Q13469 925 aa17.54■□□□□ 0.4
TPM1-203ENST00000317516 WDR74Q6RFH5 385 aaPredicted RBP17.54■□□□□ 0.4
TPM1-203ENST00000317516 BBS12Q6ZW61 710 aa17.54■□□□□ 0.4
TPM1-203ENST00000317516 ADGRG6Q86SQ4 1221 aa17.54■□□□□ 0.4
TPM1-203ENST00000317516 BRSK1Q8TDC3 778 aa17.54■□□□□ 0.4
TPM1-203ENST00000317516 TTC25Q96NG3 672 aa17.54■□□□□ 0.4
TPM1-203ENST00000317516 HEMGNQ9BXL5 484 aa17.54■□□□□ 0.4
TPM1-203ENST00000317516 OSGEPL1Q9H4B0 414 aa17.54■□□□□ 0.4
TPM1-203ENST00000317516 EPB41L1Q9H4G0 881 aa17.54■□□□□ 0.4
TPM1-203ENST00000317516 ARFGAP3Q9NP61 516 aa17.54■□□□□ 0.4
TPM1-203ENST00000317516 KLC4Q9NSK0 619 aa17.54■□□□□ 0.4
TPM1-203ENST00000317516 EFR3BQ9Y2G0 817 aa17.54■□□□□ 0.4
TPM1-203ENST00000317516 PCYT1BQ9Y5K3 369 aaPredicted RBP17.54■□□□□ 0.4
TPM1-203ENST00000317516 ARHGEF17Q96PE2 2063 aaPredicted RBP17.53■□□□□ 0.4
TPM1-203ENST00000317516 C9orf172C9J069 976 aa17.53■□□□□ 0.4
TPM1-203ENST00000317516 H7C0C1 242 aa17.53■□□□□ 0.4
TPM1-203ENST00000317516 APOC4-APOC2K7ER74 178 aa17.53■□□□□ 0.4
TPM1-203ENST00000317516 CHUKO15111 745 aa17.53■□□□□ 0.4
TPM1-203ENST00000317516 APOC2P02655 101 aa17.53■□□□□ 0.4
TPM1-203ENST00000317516 THRAP10827 490 aa17.53■□□□□ 0.4
TPM1-203ENST00000317516 CCL4P13236 92 aa17.53■□□□□ 0.4
TPM1-203ENST00000317516 HLA-DPA1P20036 260 aa17.53■□□□□ 0.4
TPM1-203ENST00000317516 ATP5OP48047 213 aa17.53■□□□□ 0.4
TPM1-203ENST00000317516 ZNF75DP51815 510 aa17.53■□□□□ 0.4
TPM1-203ENST00000317516 EPHA4P54764 986 aa17.53■□□□□ 0.4
TPM1-203ENST00000317516 TGIF1Q15583 401 aa17.53■□□□□ 0.4
TPM1-203ENST00000317516 INSCQ1MX18 579 aa17.53■□□□□ 0.4
TPM1-203ENST00000317516 MANEAQ5SRI9 462 aa17.53■□□□□ 0.4
TPM1-203ENST00000317516 KDELC1Q6UW63 502 aa17.53■□□□□ 0.4
TPM1-203ENST00000317516 LRRTM4Q86VH4 590 aa17.53■□□□□ 0.4
TPM1-203ENST00000317516 ZNF567Q8N184 647 aa17.53■□□□□ 0.4
TPM1-203ENST00000317516 ZSCAN1Q8NBB4 408 aa17.53■□□□□ 0.4
TPM1-203ENST00000317516 GDAP1Q8TB36 358 aa17.53■□□□□ 0.4
TPM1-203ENST00000317516 DTX3LQ8TDB6 740 aa17.53■□□□□ 0.4
TPM1-203ENST00000317516 HAUS1Q96CS2 278 aa17.53■□□□□ 0.4
TPM1-203ENST00000317516 QKIQ96PU8 341 aaKnown RBP eCLIP17.53■□□□□ 0.43e-9■■■■■ 44.3
TPM1-203ENST00000317516 VPS35Q96QK1 796 aa17.53■□□□□ 0.4
TPM1-203ENST00000317516 FSD1LQ9BXM9 530 aa17.53■□□□□ 0.4
TPM1-203ENST00000317516 ASPSCR1Q9BZE9 553 aa17.53■□□□□ 0.4
TPM1-203ENST00000317516 BPIFA1Q9NP55 256 aa17.53■□□□□ 0.4
TPM1-203ENST00000317516 PRDM8Q9NQV8 689 aa17.53■□□□□ 0.4
TPM1-203ENST00000317516 PDP2Q9P2J9 529 aa17.53■□□□□ 0.4
TPM1-203ENST00000317516 CPNE7Q9UBL6 633 aa17.53■□□□□ 0.4
TPM1-203ENST00000317516 RSPH14Q9UHP6 348 aa17.53■□□□□ 0.4
TPM1-203ENST00000317516 TFR2Q9UP52 801 aa17.53■□□□□ 0.4
TPM1-203ENST00000317516 PCDHGA3Q9Y5H0 932 aa17.53■□□□□ 0.4
TPM1-203ENST00000317516 PCDHA3Q9Y5H8 950 aa17.53■□□□□ 0.4
TPM1-203ENST00000317516 SPO11Q9Y5K1 396 aa17.53■□□□□ 0.4
TPM1-203ENST00000317516 ADGRG1Q9Y653 693 aa17.53■□□□□ 0.4
TPM1-203ENST00000317516 BPTFQ12830 3046 aa17.52■□□□□ 0.4
TPM1-203ENST00000317516 A6NCN8 305 aa17.52■□□□□ 0.4
TPM1-203ENST00000317516 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.52■□□□□ 0.4
TPM1-203ENST00000317516 STMND1H3BQB6 276 aa17.52■□□□□ 0.4
TPM1-203ENST00000317516 AURKAO14965 403 aa17.52■□□□□ 0.4
TPM1-203ENST00000317516 PPFIA2O75334 1257 aa17.52■□□□□ 0.4
TPM1-203ENST00000317516 ANXA9O76027 345 aa17.52■□□□□ 0.4
TPM1-203ENST00000317516 PRB1P04280 392 aa17.52■□□□□ 0.4
TPM1-203ENST00000317516 FGF3P11487 239 aaPredicted RBP17.52■□□□□ 0.4
TPM1-203ENST00000317516 ZNF7P17097 686 aaPredicted RBP17.52■□□□□ 0.4
TPM1-203ENST00000317516 VCLP18206 1134 aa17.52■□□□□ 0.4
TPM1-203ENST00000317516 MPSTP25325 297 aa17.52■□□□□ 0.4
TPM1-203ENST00000317516 CTNNA2P26232 953 aa17.52■□□□□ 0.4
TPM1-203ENST00000317516 CSF2RBP32927 897 aa17.52■□□□□ 0.4
TPM1-203ENST00000317516 CTNNA1P35221 906 aaKnown RBP17.52■□□□□ 0.4
TPM1-203ENST00000317516 CFHR1Q03591 330 aa17.52■□□□□ 0.4
TPM1-203ENST00000317516 GTF2H3Q13889 308 aa17.52■□□□□ 0.4
TPM1-203ENST00000317516 SLC1A5Q15758 541 aa17.52■□□□□ 0.4
TPM1-203ENST00000317516 SIRPB2Q5JXA9 342 aa17.52■□□□□ 0.4
TPM1-203ENST00000317516 ZNF648Q5T619 568 aaPredicted RBP17.52■□□□□ 0.4
TPM1-203ENST00000317516 ITPRIPL1Q6GPH6 555 aa17.52■□□□□ 0.4
TPM1-203ENST00000317516 CRTC3Q6UUV7 619 aa17.52■□□□□ 0.4
TPM1-203ENST00000317516 ZFAND4Q86XD8 727 aa17.52■□□□□ 0.4
TPM1-203ENST00000317516 ZNF761Q86XN6 746 aaPredicted RBP17.52■□□□□ 0.4
TPM1-203ENST00000317516 SLC25A41Q8N5S1 370 aa17.52■□□□□ 0.4
TPM1-203ENST00000317516 IPMKQ8NFU5 416 aa17.52■□□□□ 0.4
TPM1-203ENST00000317516 NCSTNQ92542 709 aa17.52■□□□□ 0.4
TPM1-203ENST00000317516 KRT35Q92764 455 aa17.52■□□□□ 0.4
TPM1-203ENST00000317516 MRGPRX2Q96LB1 330 aa17.52■□□□□ 0.4
TPM1-203ENST00000317516 TIMM29Q9BSF4 260 aa17.52■□□□□ 0.4
TPM1-203ENST00000317516 SLC39A1Q9NY26 324 aa17.52■□□□□ 0.4
TPM1-203ENST00000317516 FOXJ2Q9P0K8 574 aa17.52■□□□□ 0.4
TPM1-203ENST00000317516 PKP3Q9Y446 797 aa17.52■□□□□ 0.4
TPM1-203ENST00000317516 KIF26BQ2KJY2 2108 aa17.51■□□□□ 0.39
TPM1-203ENST00000317516 CCDC66A2RUB6 948 aa17.51■□□□□ 0.39
TPM1-203ENST00000317516 SOWAHDA6NJG2 315 aa17.51■□□□□ 0.39
TPM1-203ENST00000317516 BTNL10A8MVZ5 291 aa17.51■□□□□ 0.39
TPM1-203ENST00000317516 B4E171 279 aa17.51■□□□□ 0.39
TPM1-203ENST00000317516 KCNJ13O60928 360 aa17.51■□□□□ 0.39
TPM1-203ENST00000317516 ZNF189O75820 626 aaPredicted RBP17.51■□□□□ 0.39
TPM1-203ENST00000317516 STK10O94804 968 aaKnown RBP17.51■□□□□ 0.39
TPM1-203ENST00000317516 VIPP01282 170 aa17.51■□□□□ 0.39
TPM1-203ENST00000317516 XRCC1P18887 633 aaPredicted RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms