RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 AGAP9Q5VTM2 703 aa6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 PDE12Q6L8Q7 609 aaKnown RBP6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 EPGNQ6UW88 154 aa6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 FAM13CQ8NE31 585 aa6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 NSUN3Q9H649 340 aaKnown RBP6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 KLC4Q9NSK0 619 aa6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 EIF2B4Q9UI10 523 aaKnown RBP6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 A0A087X1B8 175 aa6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 FADS2P1A8MWK0 482 aa6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 SPINT1O43278 529 aa6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 FSHRP23945 695 aa6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 ATP5F1P24539 256 aaPredicted RBP6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 GRK2P25098 689 aa6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 PRKAA2P54646 552 aa6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 BTKQ06187 659 aa6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 FAM45BPQ6NSW5 357 aa6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 HMGCLL1Q8TB92 370 aa6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 FAM45AQ8TCE6 357 aa6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 OSCP1Q8WVF1 389 aa6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 PBXIP1Q96AQ6 731 aa6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 CCDC124Q96CT7 223 aaKnown RBP6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 SCRN2Q96FV2 425 aa6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 LENG8Q96PV6 779 aaPredicted RBP6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 ILKAPQ9H0C8 392 aaPredicted RBP6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 P2RY12Q9H244 342 aa6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 CCDC68Q9H2F9 335 aa6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 CRLS1Q9UJA2 301 aa6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 SLC25A13Q9UJS0 675 aa6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 RNF112Q9ULX5 631 aa6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 ANKRD6Q9Y2G4 727 aa6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 PRR23AA6NEV1 266 aa6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 TBX10O75333 385 aa6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 CDK14O94921 469 aa6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 ZNF678Q5SXM1 525 aa6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 ELMSAN1Q6PJG2 1045 aa6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 PARS2Q7L3T8 475 aaKnown RBP6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 GPR65Q8IYL9 337 aa6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 CNPY4Q8N129 248 aa6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 ZNF398Q8TD17 642 aa6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 PPM1EQ8WY54 764 aa6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 ECHDC3Q96DC8 303 aa6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 WWP1Q9H0M0 922 aa6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 TUBB1Q9H4B7 451 aa6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 DENND2DQ9H6A0 471 aaPredicted RBP6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 CD93Q9NPY3 652 aa6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 TAS2R13Q9NYV9 303 aa6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 APOBEC2Q9Y235 224 aaKnown RBP6.93□□□□□ -1.3
LYSMD3-201ENST00000315948 HELZP42694 1942 aaKnown RBP6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 H3BQ06 376 aaPredicted RBP6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 KATNA1O75449 491 aa6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 ZNF189O75820 626 aaPredicted RBP6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 LINC00032P0C843 101 aa6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 ESRRAP11474 423 aaPredicted RBP6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 TIMP2P16035 220 aa6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 SOX11P35716 441 aa6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 HSPA14Q0VDF9 509 aa6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 ACAP2Q15057 778 aa6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 PTRHD1Q6GMV3 140 aaKnown RBP6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 GDPD4Q6W3E5 623 aa6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 MMAAQ8IVH4 418 aaKnown RBP6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 CELF5Q8N6W0 485 aaKnown RBP6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 HIPK4Q8NE63 616 aa6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 BPIFB1Q8TDL5 484 aa6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 KCNV2Q8TDN2 545 aa6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 SKA2Q8WVK7 121 aaPredicted RBP6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 SMARCD2Q92925 531 aa6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 PYCR2Q96C36 320 aa6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 FAM83CQ9BQN1 747 aa6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 RIOK2Q9BVS4 552 aaKnown RBP6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 ACTR5Q9H9F9 607 aaPredicted RBP6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 MID1IP1Q9NPA3 183 aa6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 TCF7L2Q9NQB0 619 aa6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 ELOVL2Q9NXB9 296 aa6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 CLEC1BQ9P126 229 aa6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 SERGEFQ9UGK8 458 aa6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 OAS3Q9Y6K5 1087 aaKnown RBP6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 A0A1W2PQ67 120 aa6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 TBC1D3BA6NDS4 549 aa6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 HNRNPA1P09651 372 aaKnown RBP eCLIP6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 OGNP20774 298 aaKnown RBP6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 ARL1P40616 181 aaPredicted RBP6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 IL12RB1P42701 662 aa6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 UBE3AQ05086 875 aa6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 MTA1Q13330 715 aa6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 SEL1L3Q68CR1 1132 aa6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 TXNDC11Q6PKC3 985 aa6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 FAM43BQ6ZT52 329 aaPredicted RBP6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 ETFBKMTQ8IXQ9 262 aa6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 RNF175Q8N4F7 328 aa6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 AGAP11Q8TF27 550 aa6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 KLK6Q92876 244 aa6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 NSL1Q96IY1 281 aa6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 SLC39A3Q9BRY0 314 aa6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 SPATA16Q9BXB7 569 aa6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 LRMDAQ9H2I8 198 aa6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 ZDHHC7Q9NXF8 308 aa6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 TRMT6Q9UJA5 497 aaKnown RBP6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 MAFFQ9ULX9 164 aa6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 ZNF510Q9Y2H8 683 aa6.92□□□□□ -1.3
LYSMD3-201ENST00000315948 DNAJC15Q9Y5T4 150 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms