RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 LTB4R2Q9NPC1 389 aa7.78□□□□□ -1.16
CNOT4-201ENST00000315544 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.78□□□□□ -1.16
CNOT4-201ENST00000315544 HACD3Q9P035 362 aa7.78□□□□□ -1.16
CNOT4-201ENST00000315544 ARHGAP26Q9UNA1 814 aa7.78□□□□□ -1.16
CNOT4-201ENST00000315544 KCTD3Q9Y597 815 aa7.78□□□□□ -1.16
CNOT4-201ENST00000315544 INO80B-WBP1J3KQ70 363 aa7.77□□□□□ -1.16
CNOT4-201ENST00000315544 FGF10O15520 208 aaPredicted RBP7.77□□□□□ -1.16
CNOT4-201ENST00000315544 PAGE1O75459 146 aa7.77□□□□□ -1.16
CNOT4-201ENST00000315544 TP53P04637 393 aaPredicted RBP7.77□□□□□ -1.16
CNOT4-201ENST00000315544 TGM1P22735 817 aa7.77□□□□□ -1.16
CNOT4-201ENST00000315544 LTBRP36941 435 aa7.77□□□□□ -1.16
CNOT4-201ENST00000315544 ASPHQ12797 758 aa7.77□□□□□ -1.16
CNOT4-201ENST00000315544 IKZF1Q13422 519 aa7.77□□□□□ -1.16
CNOT4-201ENST00000315544 SQLEQ14534 574 aa7.77□□□□□ -1.16
CNOT4-201ENST00000315544 CYTH1Q15438 398 aa7.77□□□□□ -1.16
CNOT4-201ENST00000315544 GEN1Q17RS7 908 aa7.77□□□□□ -1.16
CNOT4-201ENST00000315544 FLYWCH1Q4VC44 716 aa7.77□□□□□ -1.16
CNOT4-201ENST00000315544 BSPRYQ5W0U4 402 aa7.77□□□□□ -1.16
CNOT4-201ENST00000315544 CAMKMTQ7Z624 323 aa7.77□□□□□ -1.16
CNOT4-201ENST00000315544 RAB44Q7Z6P3 723 aaPredicted RBP7.77□□□□□ -1.16
CNOT4-201ENST00000315544 TFAP2DQ7Z6R9 452 aa7.77□□□□□ -1.16
CNOT4-201ENST00000315544 MAP7D3Q8IWC1 876 aa7.77□□□□□ -1.16
CNOT4-201ENST00000315544 VMP1Q96GC9 406 aa7.77□□□□□ -1.16
CNOT4-201ENST00000315544 TKTL2Q9H0I9 626 aa7.77□□□□□ -1.16
CNOT4-201ENST00000315544 MRPL46Q9H2W6 279 aaKnown RBP7.77□□□□□ -1.16
CNOT4-201ENST00000315544 APOBEC2Q9Y235 224 aaKnown RBP7.77□□□□□ -1.16
CNOT4-201ENST00000315544 M0QYT0 321 aa7.77□□□□□ -1.17
CNOT4-201ENST00000315544 SPINT1O43278 529 aa7.77□□□□□ -1.17
CNOT4-201ENST00000315544 CSF2RAP15509 400 aa7.77□□□□□ -1.17
CNOT4-201ENST00000315544 CES1P23141 567 aa7.77□□□□□ -1.17
CNOT4-201ENST00000315544 ABCG1P45844 678 aa7.77□□□□□ -1.17
CNOT4-201ENST00000315544 SLC15A1P46059 708 aa7.77□□□□□ -1.17
CNOT4-201ENST00000315544 SCNN1GP51170 649 aa7.77□□□□□ -1.17
CNOT4-201ENST00000315544 CLCN4P51793 760 aa7.77□□□□□ -1.17
CNOT4-201ENST00000315544 PRSS53Q2L4Q9 553 aa7.77□□□□□ -1.17
CNOT4-201ENST00000315544 KLHL35Q6PF15 583 aa7.77□□□□□ -1.17
CNOT4-201ENST00000315544 SEZ6L2Q6UXD5 910 aa7.77□□□□□ -1.17
CNOT4-201ENST00000315544 SYVN1Q86TM6 617 aa7.77□□□□□ -1.17
CNOT4-201ENST00000315544 ITIH5Q86UX2 942 aa7.77□□□□□ -1.17
CNOT4-201ENST00000315544 PIANPQ8IYJ0 282 aa7.77□□□□□ -1.17
CNOT4-201ENST00000315544 VN1R2Q8NFZ6 395 aa7.77□□□□□ -1.17
CNOT4-201ENST00000315544 ZNF420Q8TAQ5 688 aaPredicted RBP7.77□□□□□ -1.17
CNOT4-201ENST00000315544 FNDC8Q8TC99 324 aa7.77□□□□□ -1.17
CNOT4-201ENST00000315544 ISOC1Q96CN7 298 aa7.77□□□□□ -1.17
CNOT4-201ENST00000315544 CEP295NLQ96MC4 621 aa7.77□□□□□ -1.17
CNOT4-201ENST00000315544 ZNF300Q96RE9 604 aaPredicted RBP7.77□□□□□ -1.17
CNOT4-201ENST00000315544 PITX2Q99697 317 aa7.77□□□□□ -1.17
CNOT4-201ENST00000315544 PAIP1Q9H074 479 aaKnown RBP7.77□□□□□ -1.17
CNOT4-201ENST00000315544 TIMMDC1Q9NPL8 285 aa7.77□□□□□ -1.17
CNOT4-201ENST00000315544 FAIMQ9NVQ4 179 aa7.77□□□□□ -1.17
CNOT4-201ENST00000315544 TMEM161AQ9NX61 479 aa7.77□□□□□ -1.17
CNOT4-201ENST00000315544 EPS15L1Q9UBC2 864 aa7.77□□□□□ -1.17
CNOT4-201ENST00000315544 ANGPTL2Q9UKU9 493 aa7.77□□□□□ -1.17
CNOT4-201ENST00000315544 B3GNT3Q9Y2A9 372 aa7.77□□□□□ -1.17
CNOT4-201ENST00000315544 SHISA7A6NL88 538 aa7.77□□□□□ -1.17
CNOT4-201ENST00000315544 MTSS1O43312 755 aa7.77□□□□□ -1.17
CNOT4-201ENST00000315544 FUT4P22083 530 aa7.77□□□□□ -1.17
CNOT4-201ENST00000315544 ATP5F1P24539 256 aaPredicted RBP7.77□□□□□ -1.17
CNOT4-201ENST00000315544 SOX18P35713 384 aa7.77□□□□□ -1.17
CNOT4-201ENST00000315544 PIGAP37287 484 aa7.77□□□□□ -1.17
CNOT4-201ENST00000315544 CDR1P51861 262 aa7.77□□□□□ -1.17
CNOT4-201ENST00000315544 ARF5P84085 180 aa7.77□□□□□ -1.17
CNOT4-201ENST00000315544 CTBP1Q13363 440 aa7.77□□□□□ -1.17
CNOT4-201ENST00000315544 LEXMQ3ZCV2 418 aa7.77□□□□□ -1.17
CNOT4-201ENST00000315544 ZC3H12BQ5HYM0 836 aaKnown RBP7.77□□□□□ -1.17
CNOT4-201ENST00000315544 GNASQ5JWF2 1037 aa7.77□□□□□ -1.17
CNOT4-201ENST00000315544 ANKRD34AQ69YU3 496 aa7.77□□□□□ -1.17
CNOT4-201ENST00000315544 CAPN13Q6MZZ7 669 aaPredicted RBP7.77□□□□□ -1.17
CNOT4-201ENST00000315544 SNX20Q7Z614 316 aa7.77□□□□□ -1.17
CNOT4-201ENST00000315544 FAM124AQ86V42 546 aa7.77□□□□□ -1.17
CNOT4-201ENST00000315544 RNF217Q8TC41 542 aa7.77□□□□□ -1.17
CNOT4-201ENST00000315544 DNAJB3Q8WWF6 145 aa7.77□□□□□ -1.17
CNOT4-201ENST00000315544 MUL1Q969V5 352 aa7.77□□□□□ -1.17
CNOT4-201ENST00000315544 ZNF649Q9BS31 505 aa7.77□□□□□ -1.17
CNOT4-201ENST00000315544 FEM1AQ9BSK4 669 aa7.77□□□□□ -1.17
CNOT4-201ENST00000315544 TRMOQ9BU70 441 aa7.77□□□□□ -1.17
CNOT4-201ENST00000315544 MENTQ9BUN1 341 aa7.77□□□□□ -1.17
CNOT4-201ENST00000315544 NAA50Q9GZZ1 169 aaKnown RBP7.77□□□□□ -1.17
CNOT4-201ENST00000315544 ZBP1Q9H171 429 aa7.77□□□□□ -1.17
CNOT4-201ENST00000315544 TFB2MQ9H5Q4 396 aaKnown RBP7.77□□□□□ -1.17
CNOT4-201ENST00000315544 RWDD3Q9Y3V2 267 aa7.77□□□□□ -1.17
CNOT4-201ENST00000315544 KLHL41O60662 606 aa7.76□□□□□ -1.17
CNOT4-201ENST00000315544 CRHBPP24387 322 aa7.76□□□□□ -1.17
CNOT4-201ENST00000315544 SPRP35270 261 aaPredicted RBP7.76□□□□□ -1.17
CNOT4-201ENST00000315544 YWHAGP61981 247 aaKnown RBP eCLIP7.76□□□□□ -1.17
CNOT4-201ENST00000315544 TRPC3Q13507 836 aa7.76□□□□□ -1.17
CNOT4-201ENST00000315544 ZNF362Q5T0B9 420 aaPredicted RBP7.76□□□□□ -1.17
CNOT4-201ENST00000315544 WDR78Q5VTH9 848 aa7.76□□□□□ -1.17
CNOT4-201ENST00000315544 METTL2BQ6P1Q9 378 aaKnown RBP7.76□□□□□ -1.17
CNOT4-201ENST00000315544 BTLAQ7Z6A9 289 aa7.76□□□□□ -1.17
CNOT4-201ENST00000315544 CUZD1Q86UP6 607 aa7.76□□□□□ -1.17
CNOT4-201ENST00000315544 RASSF3Q86WH2 238 aa7.76□□□□□ -1.17
CNOT4-201ENST00000315544 ZNF485Q8NCK3 441 aa7.76□□□□□ -1.17
CNOT4-201ENST00000315544 BHLHE22Q8NFJ8 381 aaPredicted RBP7.76□□□□□ -1.17
CNOT4-201ENST00000315544 CHPT1Q8WUD6 406 aa7.76□□□□□ -1.17
CNOT4-201ENST00000315544 SLC24A3Q9HC58 644 aa7.76□□□□□ -1.17
CNOT4-201ENST00000315544 COMMD8Q9NX08 183 aa7.76□□□□□ -1.17
CNOT4-201ENST00000315544 ACTL7AQ9Y615 435 aa7.76□□□□□ -1.17
CNOT4-201ENST00000315544 FAM95CA0A1B0GW59 222 aa7.76□□□□□ -1.17
CNOT4-201ENST00000315544 BBIP1A8MTZ0 92 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms