RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 FERD3LQ96RJ6 166 aa13.57□□□□□ -0.24
DDX54-202ENST00000314045 RETREG1Q9H6L5 497 aa13.57□□□□□ -0.24
DDX54-202ENST00000314045 MAFFQ9ULX9 164 aa13.57□□□□□ -0.24
DDX54-202ENST00000314045 SLC28A1O00337 649 aa13.57□□□□□ -0.24
DDX54-202ENST00000314045 ATP6V1G2O95670 118 aa13.57□□□□□ -0.24
DDX54-202ENST00000314045 NTHL1P78549 312 aa13.57□□□□□ -0.24
DDX54-202ENST00000314045 GRSF1Q12849 480 aaKnown RBP eCLIP13.57□□□□□ -0.24
DDX54-202ENST00000314045 LCP2Q13094 533 aa13.57□□□□□ -0.24
DDX54-202ENST00000314045 MAPKAPK3Q16644 382 aa13.57□□□□□ -0.24
DDX54-202ENST00000314045 INO80DQ53TQ3 878 aaPredicted RBP13.57□□□□□ -0.24
DDX54-202ENST00000314045 RBM20Q5T481 1227 aaKnown RBP13.57□□□□□ -0.24
DDX54-202ENST00000314045 ZNF783Q6ZMS7 281 aa13.57□□□□□ -0.24
DDX54-202ENST00000314045 ZNF781Q8N8C0 355 aa13.57□□□□□ -0.24
DDX54-202ENST00000314045 GPR156Q8NFN8 814 aa13.57□□□□□ -0.24
DDX54-202ENST00000314045 RCN3Q96D15 328 aa13.57□□□□□ -0.24
DDX54-202ENST00000314045 QRFPRQ96P65 431 aa13.57□□□□□ -0.24
DDX54-202ENST00000314045 ADNPQ9H2P0 1102 aa13.57□□□□□ -0.24
DDX54-202ENST00000314045 DNAJC11Q9NVH1 559 aa13.57□□□□□ -0.24
DDX54-202ENST00000314045 SGTAO43765 313 aa13.57□□□□□ -0.24
DDX54-202ENST00000314045 PCCBP05166 539 aa13.57□□□□□ -0.24
DDX54-202ENST00000314045 POLE2P56282 527 aa13.57□□□□□ -0.24
DDX54-202ENST00000314045 CLEC6AQ6EIG7 209 aa13.57□□□□□ -0.24
DDX54-202ENST00000314045 CAPN13Q6MZZ7 669 aaPredicted RBP13.57□□□□□ -0.24
DDX54-202ENST00000314045 HDDC3Q8N4P3 179 aa13.57□□□□□ -0.24
DDX54-202ENST00000314045 CLDN19Q8N6F1 224 aa13.57□□□□□ -0.24
DDX54-202ENST00000314045 FITM2Q8N6M3 262 aa13.57□□□□□ -0.24
DDX54-202ENST00000314045 FIG4Q92562 907 aa13.57□□□□□ -0.24
DDX54-202ENST00000314045 MAGED4Q96JG8 741 aa13.57□□□□□ -0.24
DDX54-202ENST00000314045 GPR22Q99680 433 aa13.57□□□□□ -0.24
DDX54-202ENST00000314045 ARL8BQ9NVJ2 186 aa13.57□□□□□ -0.24
DDX54-202ENST00000314045 NUDT4Q9NZJ9 180 aa13.57□□□□□ -0.24
DDX54-202ENST00000314045 STX18Q9P2W9 335 aaKnown RBP13.57□□□□□ -0.24
DDX54-202ENST00000314045 OGDHLQ9ULD0 1010 aa13.57□□□□□ -0.24
DDX54-202ENST00000314045 PAPPA2Q9BXP8 1791 aa13.57□□□□□ -0.24
DDX54-202ENST00000314045 KLF10Q13118 480 aa13.57□□□□□ -0.24
DDX54-202ENST00000314045 KPNB1Q14974 876 aaKnown RBP13.57□□□□□ -0.24
DDX54-202ENST00000314045 TBCELQ5QJ74 424 aa13.57□□□□□ -0.24
DDX54-202ENST00000314045 GSTCDQ8NEC7 633 aa13.57□□□□□ -0.24
DDX54-202ENST00000314045 STARD8Q92502 1023 aa13.57□□□□□ -0.24
DDX54-202ENST00000314045 KLK6Q92876 244 aa13.57□□□□□ -0.24
DDX54-202ENST00000314045 MRGPRX2Q96LB1 330 aa13.57□□□□□ -0.24
DDX54-202ENST00000314045 TBCDQ9BTW9 1192 aa13.57□□□□□ -0.24
DDX54-202ENST00000314045 NOL11Q9H8H0 719 aaKnown RBP13.57□□□□□ -0.24
DDX54-202ENST00000314045 IL36AQ9UHA7 158 aa13.57□□□□□ -0.24
DDX54-202ENST00000314045 CIDEBQ9UHD4 219 aa13.57□□□□□ -0.24
DDX54-202ENST00000314045 PAPSS2O95340 614 aaPredicted RBP13.56□□□□□ -0.24
DDX54-202ENST00000314045 AMD1P17707 334 aa13.56□□□□□ -0.24
DDX54-202ENST00000314045 TIE1P35590 1138 aa13.56□□□□□ -0.24
DDX54-202ENST00000314045 STK19P49842 368 aaPredicted RBP13.56□□□□□ -0.24
DDX54-202ENST00000314045 PSME3P61289 254 aa13.56□□□□□ -0.24
DDX54-202ENST00000314045 LRRC23Q53EV4 343 aaPredicted RBP13.56□□□□□ -0.24
DDX54-202ENST00000314045 TCAIMQ8N3R3 496 aa13.56□□□□□ -0.24
DDX54-202ENST00000314045 NAF1Q96HR8 494 aaKnown RBP13.56□□□□□ -0.24
DDX54-202ENST00000314045 DZANK1Q9NVP4 752 aa13.56□□□□□ -0.24
DDX54-202ENST00000314045 MTMR10Q9NXD2 777 aa13.56□□□□□ -0.24
DDX54-202ENST00000314045 LEF1Q9UJU2 399 aaPredicted RBP13.56□□□□□ -0.24
DDX54-202ENST00000314045 SLC27A6Q9Y2P4 619 aa13.56□□□□□ -0.24
DDX54-202ENST00000314045 TTC36A6NLP5 189 aa13.56□□□□□ -0.24
DDX54-202ENST00000314045 SEC24AO95486 1093 aa13.56□□□□□ -0.24
DDX54-202ENST00000314045 HPCAL1P37235 193 aa13.56□□□□□ -0.24
DDX54-202ENST00000314045 RPL26P61254 145 aaKnown RBP13.56□□□□□ -0.24
DDX54-202ENST00000314045 METTL21CQ5VZV1 264 aa13.56□□□□□ -0.24
DDX54-202ENST00000314045 LHX8Q68G74 356 aa13.56□□□□□ -0.24
DDX54-202ENST00000314045 TMEM132CQ8N3T6 1108 aa13.56□□□□□ -0.24
DDX54-202ENST00000314045 CNTD1Q8N815 330 aa13.56□□□□□ -0.24
DDX54-202ENST00000314045 DNAJB14Q8TBM8 379 aa13.56□□□□□ -0.24
DDX54-202ENST00000314045 GFM2Q969S9 779 aaKnown RBP13.56□□□□□ -0.24
DDX54-202ENST00000314045 BBS4Q96RK4 519 aa13.56□□□□□ -0.24
DDX54-202ENST00000314045 CAAP1Q9H8G2 361 aa13.56□□□□□ -0.24
DDX54-202ENST00000314045 RPL26L1Q9UNX3 145 aaKnown RBP13.56□□□□□ -0.24
DDX54-202ENST00000314045 MTX2O75431 263 aa13.56□□□□□ -0.24
DDX54-202ENST00000314045 ALBP02768 609 aa13.56□□□□□ -0.24
DDX54-202ENST00000314045 NTRK1P04629 796 aa13.56□□□□□ -0.24
DDX54-202ENST00000314045 IDSP22304 550 aa13.56□□□□□ -0.24
DDX54-202ENST00000314045 GJA8P48165 433 aa13.56□□□□□ -0.24
DDX54-202ENST00000314045 SLC18A1P54219 525 aa13.56□□□□□ -0.24
DDX54-202ENST00000314045 NAPRTQ6XQN6 538 aa13.56□□□□□ -0.24
DDX54-202ENST00000314045 SCML4Q8N228 414 aa13.56□□□□□ -0.24
DDX54-202ENST00000314045 VPS33AQ96AX1 596 aa13.56□□□□□ -0.24
DDX54-202ENST00000314045 C19orf60Q96EN9 201 aa13.56□□□□□ -0.24
DDX54-202ENST00000314045 RIOK2Q9BVS4 552 aaKnown RBP13.56□□□□□ -0.24
DDX54-202ENST00000314045 EIF2B4Q9UI10 523 aaKnown RBP13.56□□□□□ -0.24
DDX54-202ENST00000314045 SLCO3A1Q9UIG8 710 aa13.56□□□□□ -0.24
DDX54-202ENST00000314045 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.55□□□□□ -0.24
DDX54-202ENST00000314045 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.55□□□□□ -0.24
DDX54-202ENST00000314045 IDO1P14902 403 aa13.55□□□□□ -0.24
DDX54-202ENST00000314045 SLC18A2Q05940 514 aa13.55□□□□□ -0.24
DDX54-202ENST00000314045 GRM2Q14416 872 aa13.55□□□□□ -0.24
DDX54-202ENST00000314045 RTP4Q96DX8 246 aa13.55□□□□□ -0.24
DDX54-202ENST00000314045 MAGEB10Q96LZ2 347 aaPredicted RBP13.55□□□□□ -0.24
DDX54-202ENST00000314045 ZDHHC3Q9NYG2 299 aa13.55□□□□□ -0.24
DDX54-202ENST00000314045 DOCK1Q14185 1865 aa13.55□□□□□ -0.24
DDX54-202ENST00000314045 F5P12259 2224 aa13.55□□□□□ -0.24
DDX54-202ENST00000314045 HLA-EP13747 358 aa13.55□□□□□ -0.24
DDX54-202ENST00000314045 CTGFP29279 349 aa13.55□□□□□ -0.24
DDX54-202ENST00000314045 ATP6V1E1P36543 226 aa13.55□□□□□ -0.24
DDX54-202ENST00000314045 ELF3P78545 371 aaPredicted RBP13.55□□□□□ -0.24
DDX54-202ENST00000314045 ZBTB49Q6ZSB9 765 aa13.55□□□□□ -0.24
DDX54-202ENST00000314045 C17orf64Q86WR6 236 aa13.55□□□□□ -0.24
DDX54-202ENST00000314045 C2orf73Q8N5S3 287 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms