RNA–Protein interactions for RNA: ENST00000313352.11

PUF60-201, Transcript of poly(U) binding splicing factor 60, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PUF60, Length 1,804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-201ENST00000313352 TMEM115Q12893 351 aaPredicted RBP16.92■□□□□ 0.3
PUF60-201ENST00000313352 KCNJ11Q14654 390 aa16.92■□□□□ 0.3
PUF60-201ENST00000313352 PDPK2PQ6A1A2 396 aa16.92■□□□□ 0.3
PUF60-201ENST00000313352 DET1Q7L5Y6 550 aa16.92■□□□□ 0.3
PUF60-201ENST00000313352 EFL1Q7Z2Z2 1120 aaKnown RBP16.92■□□□□ 0.3
PUF60-201ENST00000313352 NAGSQ8N159 534 aa16.92■□□□□ 0.3
PUF60-201ENST00000313352 BEND7Q8N7W2 519 aaPredicted RBP16.92■□□□□ 0.3
PUF60-201ENST00000313352 RASGEF1AQ8N9B8 481 aa16.92■□□□□ 0.3
PUF60-201ENST00000313352 GPR156Q8NFN8 814 aa16.92■□□□□ 0.3
PUF60-201ENST00000313352 CPT1BQ92523 772 aa16.92■□□□□ 0.3
PUF60-201ENST00000313352 CDKN2AIPNLQ96HQ2 116 aa16.92■□□□□ 0.3
PUF60-201ENST00000313352 NLE1Q9NVX2 485 aaPredicted RBP16.92■□□□□ 0.3
PUF60-201ENST00000313352 CHUKO15111 745 aa16.91■□□□□ 0.3
PUF60-201ENST00000313352 CDK14O94921 469 aa16.91■□□□□ 0.3
PUF60-201ENST00000313352 MC4RP32245 332 aa16.91■□□□□ 0.3
PUF60-201ENST00000313352 MRPS25P82663 173 aaKnown RBP16.91■□□□□ 0.3
PUF60-201ENST00000313352 B4GALNT1Q00973 533 aa16.91■□□□□ 0.3
PUF60-201ENST00000313352 ILF3Q12906 894 aaKnown RBP eCLIP16.91■□□□□ 0.3
PUF60-201ENST00000313352 NFATC2Q13469 925 aa16.91■□□□□ 0.3
PUF60-201ENST00000313352 NR0B2Q15466 257 aa16.91■□□□□ 0.3
PUF60-201ENST00000313352 LVRNQ6Q4G3 990 aa16.91■□□□□ 0.3
PUF60-201ENST00000313352 KLHL7Q8IXQ5 586 aa16.91■□□□□ 0.3
PUF60-201ENST00000313352 ARL10Q8N8L6 244 aa16.91■□□□□ 0.3
PUF60-201ENST00000313352 OR13J1Q8NGT2 312 aa16.91■□□□□ 0.3
PUF60-201ENST00000313352 TRIM56Q9BRZ2 755 aaKnown RBP16.91■□□□□ 0.3
PUF60-201ENST00000313352 GSDMCQ9BYG8 508 aa16.91■□□□□ 0.3
PUF60-201ENST00000313352 CHRAC1Q9NRG0 131 aa16.91■□□□□ 0.3
PUF60-201ENST00000313352 FEZ2Q9UHY8 353 aaPredicted RBP16.91■□□□□ 0.3
PUF60-201ENST00000313352 PADI4Q9UM07 663 aa16.91■□□□□ 0.3
PUF60-201ENST00000313352 AKAP13Q12802 2813 aa16.91■□□□□ 0.3
PUF60-201ENST00000313352 ZFC3H1O60293 1989 aaKnown RBP16.91■□□□□ 0.3
PUF60-201ENST00000313352 OR2AG2A6NM03 316 aa16.91■□□□□ 0.3
PUF60-201ENST00000313352 GOLGA8MH3BSY2 632 aa16.91■□□□□ 0.3
PUF60-201ENST00000313352 PPFIA2O75334 1257 aa16.91■□□□□ 0.3
PUF60-201ENST00000313352 ECEL1O95672 775 aa16.91■□□□□ 0.3
PUF60-201ENST00000313352 INSM1Q01101 510 aaPredicted RBP16.91■□□□□ 0.3
PUF60-201ENST00000313352 SMAD1Q15797 465 aaKnown RBP16.91■□□□□ 0.3
PUF60-201ENST00000313352 OGFOD3Q6PK18 319 aa16.91■□□□□ 0.3
PUF60-201ENST00000313352 C11orf96Q7Z7L8 435 aa16.91■□□□□ 0.3
PUF60-201ENST00000313352 PIANPQ8IYJ0 282 aa16.91■□□□□ 0.3
PUF60-201ENST00000313352 MPP5Q8N3R9 675 aa16.91■□□□□ 0.3
PUF60-201ENST00000313352 DDHD1Q8NEL9 900 aa16.91■□□□□ 0.3
PUF60-201ENST00000313352 ZDHHC1Q8WTX9 485 aa16.91■□□□□ 0.3
PUF60-201ENST00000313352 EIF2B3Q9NR50 452 aaKnown RBP16.91■□□□□ 0.3
PUF60-201ENST00000313352 TBC1D29Q9UFV1 150 aa16.91■□□□□ 0.3
PUF60-201ENST00000313352 DNAJC16Q9Y2G8 782 aa16.91■□□□□ 0.3
PUF60-201ENST00000313352 PCDHGA1Q9Y5H4 931 aa16.91■□□□□ 0.3
PUF60-201ENST00000313352 CELSR3Q9NYQ7 3312 aa16.9■□□□□ 0.3
PUF60-201ENST00000313352 PTGIRP43119 386 aa16.9■□□□□ 0.3
PUF60-201ENST00000313352 ETF1P62495 437 aaKnown RBP16.9■□□□□ 0.3
PUF60-201ENST00000313352 ZDHHC20Q5W0Z9 365 aa16.9■□□□□ 0.3
PUF60-201ENST00000313352 CES3Q6UWW8 571 aa16.9■□□□□ 0.3
PUF60-201ENST00000313352 DTX3LQ8TDB6 740 aa16.9■□□□□ 0.3
PUF60-201ENST00000313352 STYXQ8WUJ0 223 aa16.9■□□□□ 0.3
PUF60-201ENST00000313352 SCG3Q8WXD2 468 aaKnown RBP16.9■□□□□ 0.3
PUF60-201ENST00000313352 LRRC45Q96CN5 670 aa16.9■□□□□ 0.3
PUF60-201ENST00000313352 SGF29Q96ES7 293 aa16.9■□□□□ 0.3
PUF60-201ENST00000313352 KLC4Q9NSK0 619 aa16.9■□□□□ 0.3
PUF60-201ENST00000313352 COL27A1Q8IZC6 1860 aaPredicted RBP16.9■□□□□ 0.3
PUF60-201ENST00000313352 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.89■□□□□ 0.29
PUF60-201ENST00000313352 GOLGA6L10A0A0M3HER8 536 aa16.89■□□□□ 0.29
PUF60-201ENST00000313352 CCDC162PA2VCL2 907 aa16.89■□□□□ 0.29
PUF60-201ENST00000313352 AGAP14A8MT82 685 aa16.89■□□□□ 0.29
PUF60-201ENST00000313352 SGTAO43765 313 aa16.89■□□□□ 0.29
PUF60-201ENST00000313352 SNX2O60749 519 aa16.89■□□□□ 0.29
PUF60-201ENST00000313352 MGAT1P26572 445 aa16.89■□□□□ 0.29
PUF60-201ENST00000313352 FNTAP49354 379 aa16.89■□□□□ 0.29
PUF60-201ENST00000313352 ITGA9Q13797 1035 aa16.89■□□□□ 0.29
PUF60-201ENST00000313352 HLTFQ14527 1009 aaKnown RBP eCLIP16.89■□□□□ 0.29
PUF60-201ENST00000313352 ZRANB3Q5FWF4 1079 aa16.89■□□□□ 0.29
PUF60-201ENST00000313352 HES3Q5TGS1 186 aa16.89■□□□□ 0.29
PUF60-201ENST00000313352 CAND1Q86VP6 1230 aaKnown RBP16.89■□□□□ 0.29
PUF60-201ENST00000313352 SDR16C5Q8N3Y7 309 aa16.89■□□□□ 0.29
PUF60-201ENST00000313352 CCDC74AQ96AQ1 378 aa16.89■□□□□ 0.29
PUF60-201ENST00000313352 C16orf45Q96MC5 204 aaPredicted RBP16.89■□□□□ 0.29
PUF60-201ENST00000313352 PRDM8Q9NQV8 689 aa16.89■□□□□ 0.29
PUF60-201ENST00000313352 SMOXQ9NWM0 555 aa16.89■□□□□ 0.29
PUF60-201ENST00000313352 SYBUQ9NX95 663 aa16.89■□□□□ 0.29
PUF60-201ENST00000313352 ANGPTL2Q9UKU9 493 aa16.89■□□□□ 0.29
PUF60-201ENST00000313352 RNF215Q9Y6U7 377 aa16.89■□□□□ 0.29
PUF60-201ENST00000313352 H7C0S8 307 aa16.89■□□□□ 0.29
PUF60-201ENST00000313352 TPSB2P20231 275 aa16.89■□□□□ 0.29
PUF60-201ENST00000313352 HADHAP40939 763 aa16.89■□□□□ 0.29
PUF60-201ENST00000313352 PDE1BQ01064 536 aa16.89■□□□□ 0.29
PUF60-201ENST00000313352 TPSAB1Q15661 275 aa16.89■□□□□ 0.29
PUF60-201ENST00000313352 SEPT7Q16181 437 aaKnown RBP16.89■□□□□ 0.29
PUF60-201ENST00000313352 C14orf28Q4W4Y0 310 aa16.89■□□□□ 0.29
PUF60-201ENST00000313352 TSTD2Q5T7W7 516 aa16.89■□□□□ 0.29
PUF60-201ENST00000313352 TMEM220Q6QAJ8 160 aa16.89■□□□□ 0.29
PUF60-201ENST00000313352 TMPRSS7Q7RTY8 843 aa16.89■□□□□ 0.29
PUF60-201ENST00000313352 ZNF761Q86XN6 746 aaPredicted RBP16.89■□□□□ 0.29
PUF60-201ENST00000313352 TRAPPC5Q8IUR0 188 aa16.89■□□□□ 0.29
PUF60-201ENST00000313352 AGGF1Q8N302 714 aaeCLIP16.89■□□□□ 0.29
PUF60-201ENST00000313352 HDAC10Q969S8 669 aa16.89■□□□□ 0.29
PUF60-201ENST00000313352 CCDC3Q9BQI4 270 aa16.89■□□□□ 0.29
PUF60-201ENST00000313352 RMI1Q9H9A7 625 aa16.89■□□□□ 0.29
PUF60-201ENST00000313352 SCHIP1Q9P0W5 487 aaPredicted RBP16.89■□□□□ 0.29
PUF60-201ENST00000313352 CRLS1Q9UJA2 301 aa16.89■□□□□ 0.29
PUF60-201ENST00000313352 APPL1Q9UKG1 709 aa16.89■□□□□ 0.29
PUF60-201ENST00000313352 TCAF1Q9Y4C2 921 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms