RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 GPR20Q99678 358 aa17.92■□□□□ 0.46
SPSB4-201ENST00000310546 LPIN3Q9BQK8 851 aa17.92■□□□□ 0.46
SPSB4-201ENST00000310546 MLPHQ9BV36 600 aaPredicted RBP17.92■□□□□ 0.46
SPSB4-201ENST00000310546 SLIRPQ9GZT3 109 aaKnown RBP17.92■□□□□ 0.46
SPSB4-201ENST00000310546 TRIM39Q9HCM9 518 aa17.92■□□□□ 0.46
SPSB4-201ENST00000310546 ISPDA4D126 451 aa17.91■□□□□ 0.46
SPSB4-201ENST00000310546 G3V2T6 193 aa17.91■□□□□ 0.46
SPSB4-201ENST00000310546 INO80B-WBP1J3KQ70 363 aa17.91■□□□□ 0.46
SPSB4-201ENST00000310546 ALX3O95076 343 aa17.91■□□□□ 0.46
SPSB4-201ENST00000310546 ABCB1P08183 1280 aaPredicted RBP17.91■□□□□ 0.46
SPSB4-201ENST00000310546 MTHFRP42898 656 aa17.91■□□□□ 0.46
SPSB4-201ENST00000310546 EFNA5P52803 228 aa17.91■□□□□ 0.46
SPSB4-201ENST00000310546 CHRNEQ04844 493 aa17.91■□□□□ 0.46
SPSB4-201ENST00000310546 SPRYD7Q5W111 196 aa17.91■□□□□ 0.46
SPSB4-201ENST00000310546 LACC1Q8IV20 430 aa17.91■□□□□ 0.46
SPSB4-201ENST00000310546 SYTL1Q8IYJ3 562 aa17.91■□□□□ 0.46
SPSB4-201ENST00000310546 SVOPQ8N4V2 548 aa17.91■□□□□ 0.46
SPSB4-201ENST00000310546 CNIH3Q8TBE1 160 aa17.91■□□□□ 0.46
SPSB4-201ENST00000310546 PROX1Q92786 737 aa17.91■□□□□ 0.46
SPSB4-201ENST00000310546 EXT2Q93063 718 aa17.91■□□□□ 0.46
SPSB4-201ENST00000310546 MED30Q96HR3 178 aa17.91■□□□□ 0.46
SPSB4-201ENST00000310546 ZFYVE19Q96K21 471 aa17.91■□□□□ 0.46
SPSB4-201ENST00000310546 NSMCE4AQ9NXX6 385 aa17.91■□□□□ 0.46
SPSB4-201ENST00000310546 SNTG2Q9NY99 539 aa17.91■□□□□ 0.46
SPSB4-201ENST00000310546 PDZK1P1A8MUH7 402 aa17.91■□□□□ 0.46
SPSB4-201ENST00000310546 A8MV72 311 aaPredicted RBP17.91■□□□□ 0.46
SPSB4-201ENST00000310546 UPK1AO00322 258 aa17.91■□□□□ 0.46
SPSB4-201ENST00000310546 KCNAB2Q13303 367 aa17.91■□□□□ 0.46
SPSB4-201ENST00000310546 UGP2Q16851 508 aa17.91■□□□□ 0.46
SPSB4-201ENST00000310546 LAIR2Q6ISS4 152 aa17.91■□□□□ 0.46
SPSB4-201ENST00000310546 ZCCHC8Q6NZY4 707 aaKnown RBP17.91■□□□□ 0.46
SPSB4-201ENST00000310546 ABI1Q8IZP0 508 aa17.91■□□□□ 0.46
SPSB4-201ENST00000310546 PNPLA1Q8N8W4 532 aa17.91■□□□□ 0.46
SPSB4-201ENST00000310546 TUBGCP3Q96CW5 907 aa17.91■□□□□ 0.46
SPSB4-201ENST00000310546 AURKBQ96GD4 344 aaPredicted RBP17.91■□□□□ 0.46
SPSB4-201ENST00000310546 ITCHQ96J02 903 aa17.91■□□□□ 0.46
SPSB4-201ENST00000310546 DMRTB1Q96MA1 342 aa17.91■□□□□ 0.46
SPSB4-201ENST00000310546 ZNF560Q96MR9 790 aa17.91■□□□□ 0.46
SPSB4-201ENST00000310546 GAD1Q99259 594 aa17.91■□□□□ 0.46
SPSB4-201ENST00000310546 PTPRHQ9HD43 1115 aa17.91■□□□□ 0.46
SPSB4-201ENST00000310546 ADPRHL2Q9NX46 363 aa17.91■□□□□ 0.46
SPSB4-201ENST00000310546 DPP3Q9NY33 737 aa17.91■□□□□ 0.46
SPSB4-201ENST00000310546 OAS3Q9Y6K5 1087 aaKnown RBP17.91■□□□□ 0.46
SPSB4-201ENST00000310546 DNAJC25-GNG10A0A024R161 153 aa17.9■□□□□ 0.46
SPSB4-201ENST00000310546 TBKBP1A7MCY6 615 aa17.9■□□□□ 0.46
SPSB4-201ENST00000310546 LACTBL1A8MY62 500 aa17.9■□□□□ 0.46
SPSB4-201ENST00000310546 PPP6CO00743 305 aa17.9■□□□□ 0.46
SPSB4-201ENST00000310546 ALOX12P18054 663 aa17.9■□□□□ 0.46
SPSB4-201ENST00000310546 GNG2P59768 71 aa17.9■□□□□ 0.46
SPSB4-201ENST00000310546 GABARAPL2P60520 117 aa17.9■□□□□ 0.46
SPSB4-201ENST00000310546 CELF3Q5SZQ8 465 aaKnown RBP17.9■□□□□ 0.46
SPSB4-201ENST00000310546 BPHLQ86WA6 291 aaPredicted RBP17.9■□□□□ 0.46
SPSB4-201ENST00000310546 DCP1BQ8IZD4 617 aaKnown RBP17.9■□□□□ 0.46
SPSB4-201ENST00000310546 NSMCE2Q96MF7 247 aa17.9■□□□□ 0.46
SPSB4-201ENST00000310546 TMEM246Q9BRR3 403 aa17.9■□□□□ 0.46
SPSB4-201ENST00000310546 BTBD2Q9BX70 525 aa17.9■□□□□ 0.46
SPSB4-201ENST00000310546 NIFKQ9BYG3 293 aaKnown RBP17.9■□□□□ 0.46
SPSB4-201ENST00000310546 SETD4Q9NVD3 440 aa17.9■□□□□ 0.46
SPSB4-201ENST00000310546 AASSQ9UDR5 926 aa17.9■□□□□ 0.46
SPSB4-201ENST00000310546 CAB39Q9Y376 341 aaPredicted RBP17.9■□□□□ 0.46
SPSB4-201ENST00000310546 DNAJC15Q9Y5T4 150 aa17.9■□□□□ 0.46
SPSB4-201ENST00000310546 TGFB3P10600 412 aa17.9■□□□□ 0.46
SPSB4-201ENST00000310546 NFKB1P19838 968 aa17.9■□□□□ 0.46
SPSB4-201ENST00000310546 HRH2P25021 359 aa17.9■□□□□ 0.46
SPSB4-201ENST00000310546 KPNA2P52292 529 aaKnown RBP17.9■□□□□ 0.46
SPSB4-201ENST00000310546 MPZL3Q6UWV2 235 aa17.9■□□□□ 0.46
SPSB4-201ENST00000310546 GPR142Q7Z601 462 aa17.9■□□□□ 0.46
SPSB4-201ENST00000310546 SLC38A6Q8IZM9 456 aa17.9■□□□□ 0.46
SPSB4-201ENST00000310546 MCOLN3Q8TDD5 553 aa17.9■□□□□ 0.46
SPSB4-201ENST00000310546 LGALS12Q96DT0 336 aa17.9■□□□□ 0.46
SPSB4-201ENST00000310546 IRF2BPLQ9H1B7 796 aa17.9■□□□□ 0.46
SPSB4-201ENST00000310546 HGFP14210 728 aa17.89■□□□□ 0.46
SPSB4-201ENST00000310546 NPY2RP49146 381 aa17.89■□□□□ 0.46
SPSB4-201ENST00000310546 ATP4BP51164 291 aa17.89■□□□□ 0.46
SPSB4-201ENST00000310546 LAPTM5Q13571 262 aa17.89■□□□□ 0.46
SPSB4-201ENST00000310546 ATAD3CQ5T2N8 411 aa17.89■□□□□ 0.46
SPSB4-201ENST00000310546 ATF7IP2Q5U623 682 aa17.89■□□□□ 0.46
SPSB4-201ENST00000310546 GLYATQ6IB77 296 aa17.89■□□□□ 0.46
SPSB4-201ENST00000310546 NEK5Q6P3R8 708 aa17.89■□□□□ 0.46
SPSB4-201ENST00000310546 TXNDC11Q6PKC3 985 aa17.89■□□□□ 0.46
SPSB4-201ENST00000310546 DEPDC4Q8N2C3 294 aa17.89■□□□□ 0.46
SPSB4-201ENST00000310546 BEND7Q8N7W2 519 aaPredicted RBP17.89■□□□□ 0.46
SPSB4-201ENST00000310546 BEST2Q8NFU1 509 aa17.89■□□□□ 0.46
SPSB4-201ENST00000310546 BPIFB1Q8TDL5 484 aa17.89■□□□□ 0.46
SPSB4-201ENST00000310546 FAM149B1Q96BN6 582 aa17.89■□□□□ 0.46
SPSB4-201ENST00000310546 ZHX1-C8orf76Q96EF9 292 aa17.89■□□□□ 0.46
SPSB4-201ENST00000310546 TRIM54Q9BYV2 358 aa17.89■□□□□ 0.46
SPSB4-201ENST00000310546 CYP3A43Q9HB55 503 aa17.89■□□□□ 0.46
SPSB4-201ENST00000310546 ERVK-18Q9QC07 812 aa17.89■□□□□ 0.46
SPSB4-201ENST00000310546 PIP5K1BO14986 540 aa17.89■□□□□ 0.45
SPSB4-201ENST00000310546 MYL3P08590 195 aa17.89■□□□□ 0.45
SPSB4-201ENST00000310546 CYP2B6P20813 491 aa17.89■□□□□ 0.45
SPSB4-201ENST00000310546 IFNA8P32881 189 aa17.89■□□□□ 0.45
SPSB4-201ENST00000310546 SLC1A2P43004 574 aa17.89■□□□□ 0.45
SPSB4-201ENST00000310546 DIO3P55073 304 aa17.89■□□□□ 0.45
SPSB4-201ENST00000310546 OR4D2P58180 307 aa17.89■□□□□ 0.45
SPSB4-201ENST00000310546 CCL14Q16627 93 aa17.89■□□□□ 0.45
SPSB4-201ENST00000310546 TECRLQ5HYJ1 363 aa17.89■□□□□ 0.45
SPSB4-201ENST00000310546 PAGE3Q5JUK9 113 aa17.89■□□□□ 0.45
SPSB4-201ENST00000310546 ZNF470Q6ECI4 717 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms