RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 SALL1Q9NSC2 1324 aa15.39■□□□□ 0.05
HCFC1-201ENST00000310441 PDP1Q9P0J1 537 aaPredicted RBP15.39■□□□□ 0.05
HCFC1-201ENST00000310441 PRLP01236 227 aa15.38■□□□□ 0.05
HCFC1-201ENST00000310441 MAGEA12P43365 314 aa15.38■□□□□ 0.05
HCFC1-201ENST00000310441 ACAP2Q15057 778 aa15.38■□□□□ 0.05
HCFC1-201ENST00000310441 SMG7Q92540 1137 aaKnown RBP15.38■□□□□ 0.05
HCFC1-201ENST00000310441 COPS8Q99627 209 aa15.38■□□□□ 0.05
HCFC1-201ENST00000310441 MSRAQ9UJ68 235 aa15.38■□□□□ 0.05
HCFC1-201ENST00000310441 ABCG2Q9UNQ0 655 aa15.38■□□□□ 0.05
HCFC1-201ENST00000310441 RP1P56715 2156 aa15.38■□□□□ 0.05
HCFC1-201ENST00000310441 WASHC1A8K0Z3 465 aa15.38■□□□□ 0.05
HCFC1-201ENST00000310441 WASH3PC4AMC7 463 aa15.38■□□□□ 0.05
HCFC1-201ENST00000310441 KERAO60938 352 aa15.38■□□□□ 0.05
HCFC1-201ENST00000310441 CLDN9O95484 217 aa15.38■□□□□ 0.05
HCFC1-201ENST00000310441 LINC00032P0C843 101 aa15.38■□□□□ 0.05
HCFC1-201ENST00000310441 PLEKHG6Q3KR16 790 aa15.38■□□□□ 0.05
HCFC1-201ENST00000310441 FAM182BQ5T319 152 aa15.38■□□□□ 0.05
HCFC1-201ENST00000310441 METTL21CQ5VZV1 264 aa15.38■□□□□ 0.05
HCFC1-201ENST00000310441 WASH2PQ6VEQ5 465 aa15.38■□□□□ 0.05
HCFC1-201ENST00000310441 UBE2Q1Q7Z7E8 422 aa15.38■□□□□ 0.05
HCFC1-201ENST00000310441 PGAM4Q8N0Y7 254 aa15.38■□□□□ 0.05
HCFC1-201ENST00000310441 ADAM32Q8TC27 787 aa15.38■□□□□ 0.05
HCFC1-201ENST00000310441 SLC16A10Q8TF71 515 aa15.38■□□□□ 0.05
HCFC1-201ENST00000310441 MARK4Q96L34 752 aa15.38■□□□□ 0.05
HCFC1-201ENST00000310441 POLR3HQ9Y535 204 aaPredicted RBP15.38■□□□□ 0.05
HCFC1-201ENST00000310441 PEX11AO75192 247 aa15.38■□□□□ 0.05
HCFC1-201ENST00000310441 CCNB2O95067 398 aa15.38■□□□□ 0.05
HCFC1-201ENST00000310441 IL1BP01584 269 aa15.38■□□□□ 0.05
HCFC1-201ENST00000310441 ADH1AP07327 375 aa15.38■□□□□ 0.05
HCFC1-201ENST00000310441 TSPAN5P62079 268 aa15.38■□□□□ 0.05
HCFC1-201ENST00000310441 CERS6Q6ZMG9 384 aa15.38■□□□□ 0.05
HCFC1-201ENST00000310441 TMEM168Q9H0V1 697 aa15.38■□□□□ 0.05
HCFC1-201ENST00000310441 ZNF638Q14966 1978 aaKnown RBP15.38■□□□□ 0.05
HCFC1-201ENST00000310441 NCOA3Q9Y6Q9 1424 aa15.38■□□□□ 0.05
HCFC1-201ENST00000310441 FAM71AQ8IYT1 594 aa15.38■□□□□ 0.05
HCFC1-201ENST00000310441 MIOSQ9NXC5 875 aa15.38■□□□□ 0.05
HCFC1-201ENST00000310441 GIN1Q9NXP7 522 aa15.38■□□□□ 0.05
HCFC1-201ENST00000310441 MOCS1Q9NZB8 636 aa15.38■□□□□ 0.05
HCFC1-201ENST00000310441 ALG5Q9Y673 324 aa15.38■□□□□ 0.05
HCFC1-201ENST00000310441 ANGPTL1O95841 491 aa15.38■□□□□ 0.05
HCFC1-201ENST00000310441 MAP4K3Q8IVH8 894 aa15.38■□□□□ 0.05
HCFC1-201ENST00000310441 CD320Q9NPF0 282 aa15.38■□□□□ 0.05
HCFC1-201ENST00000310441 AIREO43918 545 aa15.38■□□□□ 0.05
HCFC1-201ENST00000310441 SH3BGRLO75368 114 aa15.38■□□□□ 0.05
HCFC1-201ENST00000310441 RECQL4O94761 1208 aa15.38■□□□□ 0.05
HCFC1-201ENST00000310441 DDR1Q08345 913 aa15.38■□□□□ 0.05
HCFC1-201ENST00000310441 E7ENX8 843 aa15.38■□□□□ 0.05
HCFC1-201ENST00000310441 RPLP0P05388 317 aaKnown RBP15.38■□□□□ 0.05
HCFC1-201ENST00000310441 ILF3Q12906 894 aaKnown RBP eCLIP15.38■□□□□ 0.05
HCFC1-201ENST00000310441 CLEC10AQ8IUN9 316 aa15.38■□□□□ 0.05
HCFC1-201ENST00000310441 TIGD4Q8IY51 512 aa15.38■□□□□ 0.05
HCFC1-201ENST00000310441 ZNF527Q8NB42 609 aa15.38■□□□□ 0.05
HCFC1-201ENST00000310441 JCADQ9P266 1359 aa15.38■□□□□ 0.05
HCFC1-201ENST00000310441 H0Y858 1186 aa15.37■□□□□ 0.05
HCFC1-201ENST00000310441 MID1O15344 667 aa15.37■□□□□ 0.05
HCFC1-201ENST00000310441 IL12BP29460 328 aa15.37■□□□□ 0.05
HCFC1-201ENST00000310441 PTPN9P43378 593 aa15.37■□□□□ 0.05
HCFC1-201ENST00000310441 IQSEC1Q6DN90 963 aa15.37■□□□□ 0.05
HCFC1-201ENST00000310441 CHST4Q8NCG5 386 aa15.37■□□□□ 0.05
HCFC1-201ENST00000310441 SLC38A4Q969I6 547 aa15.37■□□□□ 0.05
HCFC1-201ENST00000310441 FERD3LQ96RJ6 166 aa15.37■□□□□ 0.05
HCFC1-201ENST00000310441 A0A0G2JLW4 131 aa15.37■□□□□ 0.05
HCFC1-201ENST00000310441 L7N2F9 121 aa15.37■□□□□ 0.05
HCFC1-201ENST00000310441 SLC22A1O15245 554 aa15.37■□□□□ 0.05
HCFC1-201ENST00000310441 MAZP56270 477 aaKnown RBP15.37■□□□□ 0.05
HCFC1-201ENST00000310441 VAMP2P63027 116 aa15.37■□□□□ 0.05
HCFC1-201ENST00000310441 LLGL2Q6P1M3 1020 aa15.37■□□□□ 0.05
HCFC1-201ENST00000310441 FAM35AQ86V20 835 aa15.37■□□□□ 0.05
HCFC1-201ENST00000310441 C5orf34Q96MH7 638 aa15.37■□□□□ 0.05
HCFC1-201ENST00000310441 ALG2Q9H553 416 aa15.37■□□□□ 0.05
HCFC1-201ENST00000310441 TMEM39AQ9NV64 488 aa15.37■□□□□ 0.05
HCFC1-201ENST00000310441 TRIP11Q15643 1979 aa15.37■□□□□ 0.05
HCFC1-201ENST00000310441 TSPAN4O14817 238 aa15.37■□□□□ 0.05
HCFC1-201ENST00000310441 PQBP1O60828 265 aaKnown RBP15.37■□□□□ 0.05
HCFC1-201ENST00000310441 CALCAP01258 141 aa15.37■□□□□ 0.05
HCFC1-201ENST00000310441 LINGO3P0C6S8 592 aa15.37■□□□□ 0.05
HCFC1-201ENST00000310441 ARP10275 920 aa15.37■□□□□ 0.05
HCFC1-201ENST00000310441 CDC25CP30307 473 aa15.37■□□□□ 0.05
HCFC1-201ENST00000310441 ACSL1P33121 698 aa15.37■□□□□ 0.05
HCFC1-201ENST00000310441 MATKP42679 507 aa15.37■□□□□ 0.05
HCFC1-201ENST00000310441 BST1Q10588 318 aa15.37■□□□□ 0.05
HCFC1-201ENST00000310441 VMACQ2NL98 169 aa15.37■□□□□ 0.05
HCFC1-201ENST00000310441 CENPNQ96H22 339 aaPredicted RBP15.37■□□□□ 0.05
HCFC1-201ENST00000310441 PSKH2Q96QS6 385 aa15.37■□□□□ 0.05
HCFC1-201ENST00000310441 ASF1AQ9Y294 204 aa15.37■□□□□ 0.05
HCFC1-201ENST00000310441 CARD8Q9Y2G2 431 aa15.37■□□□□ 0.05
HCFC1-201ENST00000310441 IPCEF1Q8WWN9 437 aaPredicted RBP15.37■□□□□ 0.05
HCFC1-201ENST00000310441 XKR8Q9H6D3 395 aa15.37■□□□□ 0.05
HCFC1-201ENST00000310441 MATN4O95460 622 aa15.37■□□□□ 0.05
HCFC1-201ENST00000310441 ANKRD52Q8NB46 1076 aa15.37■□□□□ 0.05
HCFC1-201ENST00000310441 FBXO6Q9NRD1 293 aaPredicted RBP15.37■□□□□ 0.05
HCFC1-201ENST00000310441 FAM205AQ6ZU69 1335 aa15.37■□□□□ 0.05
HCFC1-201ENST00000310441 RARRES1P49788 294 aa15.37■□□□□ 0.05
HCFC1-201ENST00000310441 OCLNQ16625 522 aa15.37■□□□□ 0.05
HCFC1-201ENST00000310441 RCN3Q96D15 328 aa15.37■□□□□ 0.05
HCFC1-201ENST00000310441 SLC22A4Q9H015 551 aa15.37■□□□□ 0.05
HCFC1-201ENST00000310441 MASP1P48740 699 aa15.37■□□□□ 0.05
HCFC1-201ENST00000310441 USF2Q15853 346 aaPredicted RBP15.37■□□□□ 0.05
HCFC1-201ENST00000310441 C9orf64Q5T6V5 341 aa15.37■□□□□ 0.05
HCFC1-201ENST00000310441 ZSWIM3Q96MP5 696 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms