RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 RBP3P10745 1247 aa19.58■□□□□ 0.72
PDZRN3-202ENST00000308537 ITIH1P19827 911 aa19.58■□□□□ 0.72
PDZRN3-202ENST00000308537 HLA-DPA1P20036 260 aa19.58■□□□□ 0.72
PDZRN3-202ENST00000308537 RBMS1P29558 406 aaKnown RBP19.58■□□□□ 0.72
PDZRN3-202ENST00000308537 ALDH4A1P30038 563 aa19.58■□□□□ 0.72
PDZRN3-202ENST00000308537 ATP5OP48047 213 aa19.58■□□□□ 0.72
PDZRN3-202ENST00000308537 CLPPQ16740 277 aaPredicted RBP19.58■□□□□ 0.72
PDZRN3-202ENST00000308537 AMZ1Q400G9 498 aa19.58■□□□□ 0.72
PDZRN3-202ENST00000308537 NKAIN2Q5VXU1 208 aa19.58■□□□□ 0.72
PDZRN3-202ENST00000308537 IYDQ6PHW0 289 aa19.58■□□□□ 0.72
PDZRN3-202ENST00000308537 FOXR1Q6PIV2 292 aa19.58■□□□□ 0.72
PDZRN3-202ENST00000308537 RANBP10Q6VN20 620 aa19.58■□□□□ 0.72
PDZRN3-202ENST00000308537 USP53Q70EK8 1073 aa19.58■□□□□ 0.72
PDZRN3-202ENST00000308537 ZNF761Q86XN6 746 aaPredicted RBP19.58■□□□□ 0.72
PDZRN3-202ENST00000308537 SPC24Q8NBT2 197 aa19.58■□□□□ 0.72
PDZRN3-202ENST00000308537 TMEM9Q9P0T7 183 aa19.58■□□□□ 0.72
PDZRN3-202ENST00000308537 RSPH14Q9UHP6 348 aa19.58■□□□□ 0.72
PDZRN3-202ENST00000308537 LOXL2Q9Y4K0 774 aa19.58■□□□□ 0.72
PDZRN3-202ENST00000308537 TRBV23OR9-2A0A075B6M9 112 aa19.57■□□□□ 0.72
PDZRN3-202ENST00000308537 MACROD2A1Z1Q3 448 aa19.57■□□□□ 0.72
PDZRN3-202ENST00000308537 GPR89AB7ZAQ6 455 aa19.57■□□□□ 0.72
PDZRN3-202ENST00000308537 AGTP01019 485 aa19.57■□□□□ 0.72
PDZRN3-202ENST00000308537 GPR89BP0CG08 455 aa19.57■□□□□ 0.72
PDZRN3-202ENST00000308537 F3P13726 295 aa19.57■□□□□ 0.72
PDZRN3-202ENST00000308537 PSMB4P28070 264 aa19.57■□□□□ 0.72
PDZRN3-202ENST00000308537 ARSDP51689 593 aa19.57■□□□□ 0.72
PDZRN3-202ENST00000308537 EIF3EP60228 445 aaKnown RBP19.57■□□□□ 0.72
PDZRN3-202ENST00000308537 CLN3Q13286 438 aa19.57■□□□□ 0.72
PDZRN3-202ENST00000308537 PEX6Q13608 980 aa19.57■□□□□ 0.72
PDZRN3-202ENST00000308537 PTPRCAPQ14761 206 aa19.57■□□□□ 0.72
PDZRN3-202ENST00000308537 ANKRD20A2Q5SQ80 823 aa19.57■□□□□ 0.72
PDZRN3-202ENST00000308537 ANKRD20A1Q5TYW2 823 aa19.57■□□□□ 0.72
PDZRN3-202ENST00000308537 ANKRD20A3Q5VUR7 823 aa19.57■□□□□ 0.72
PDZRN3-202ENST00000308537 PCSK4Q6UW60 755 aa19.57■□□□□ 0.72
PDZRN3-202ENST00000308537 KCNE4Q8WWG9 221 aa19.57■□□□□ 0.72
PDZRN3-202ENST00000308537 STRADBQ9C0K7 418 aa19.57■□□□□ 0.72
PDZRN3-202ENST00000308537 SARS2Q9NP81 518 aaKnown RBP19.57■□□□□ 0.72
PDZRN3-202ENST00000308537 SCHIP1Q9P0W5 487 aaPredicted RBP19.57■□□□□ 0.72
PDZRN3-202ENST00000308537 PDP2Q9P2J9 529 aa19.57■□□□□ 0.72
PDZRN3-202ENST00000308537 BUD23O43709 281 aaKnown RBP19.56■□□□□ 0.72
PDZRN3-202ENST00000308537 FTCDO95954 541 aa19.56■□□□□ 0.72
PDZRN3-202ENST00000308537 THRAP10827 490 aa19.56■□□□□ 0.72
PDZRN3-202ENST00000308537 SLC5A2P31639 672 aa19.56■□□□□ 0.72
PDZRN3-202ENST00000308537 LIMK2P53671 638 aa19.56■□□□□ 0.72
PDZRN3-202ENST00000308537 NAP1L1P55209 391 aaKnown RBP19.56■□□□□ 0.72
PDZRN3-202ENST00000308537 UBE2IP63279 158 aaKnown RBP19.56■□□□□ 0.72
PDZRN3-202ENST00000308537 MAP9Q49MG5 647 aa19.56■□□□□ 0.72
PDZRN3-202ENST00000308537 DENND5AQ6IQ26 1287 aa19.56■□□□□ 0.72
PDZRN3-202ENST00000308537 CCDC70Q6NSX1 233 aa19.56■□□□□ 0.72
PDZRN3-202ENST00000308537 KIAA1328Q86T90 577 aa19.56■□□□□ 0.72
PDZRN3-202ENST00000308537 PIM3Q86V86 326 aa19.56■□□□□ 0.72
PDZRN3-202ENST00000308537 PHYKPLQ8IUZ5 450 aa19.56■□□□□ 0.72
PDZRN3-202ENST00000308537 CDKL3Q8IVW4 592 aaPredicted RBP19.56■□□□□ 0.72
PDZRN3-202ENST00000308537 CCDC110Q8TBZ0 833 aa19.56■□□□□ 0.72
PDZRN3-202ENST00000308537 SNRNP27Q8WVK2 155 aaKnown RBP19.56■□□□□ 0.72
PDZRN3-202ENST00000308537 HES6Q96HZ4 224 aa19.56■□□□□ 0.72
PDZRN3-202ENST00000308537 SPATA13Q96N96 652 aa19.56■□□□□ 0.72
PDZRN3-202ENST00000308537 FCRL3Q96P31 734 aaPredicted RBP19.56■□□□□ 0.72
PDZRN3-202ENST00000308537 DPH1Q9BZG8 443 aa19.56■□□□□ 0.72
PDZRN3-202ENST00000308537 PRDM8Q9NQV8 689 aa19.56■□□□□ 0.72
PDZRN3-202ENST00000308537 HACD3Q9P035 362 aa19.56■□□□□ 0.72
PDZRN3-202ENST00000308537 TCRBV7S2A1N4TA0A589 114 aa19.55■□□□□ 0.72
PDZRN3-202ENST00000308537 KCNN4O15554 427 aa19.55■□□□□ 0.72
PDZRN3-202ENST00000308537 BRAFP15056 766 aa19.55■□□□□ 0.72
PDZRN3-202ENST00000308537 CHRNA6Q15825 494 aa19.55■□□□□ 0.72
PDZRN3-202ENST00000308537 CRTC3Q6UUV7 619 aa19.55■□□□□ 0.72
PDZRN3-202ENST00000308537 XKR5Q6UX68 686 aa19.55■□□□□ 0.72
PDZRN3-202ENST00000308537 PEX26Q7Z412 305 aa19.55■□□□□ 0.72
PDZRN3-202ENST00000308537 RCBTB1Q8NDN9 531 aa19.55■□□□□ 0.72
PDZRN3-202ENST00000308537 OR4D9Q8NGE8 314 aa19.55■□□□□ 0.72
PDZRN3-202ENST00000308537 BLOC1S5Q8TDH9 187 aa19.55■□□□□ 0.72
PDZRN3-202ENST00000308537 PMEPA1Q969W9 287 aa19.55■□□□□ 0.72
PDZRN3-202ENST00000308537 FICDQ9BVA6 458 aa19.55■□□□□ 0.72
PDZRN3-202ENST00000308537 KLC4Q9NSK0 619 aa19.55■□□□□ 0.72
PDZRN3-202ENST00000308537 PISDQ9UG56 409 aa19.55■□□□□ 0.72
PDZRN3-202ENST00000308537 AMFRQ9UKV5 643 aa19.55■□□□□ 0.72
PDZRN3-202ENST00000308537 R3HDM2Q9Y2K5 976 aaKnown RBP19.55■□□□□ 0.72
PDZRN3-202ENST00000308537 C9orf172C9J069 976 aa19.54■□□□□ 0.72
PDZRN3-202ENST00000308537 AGRPO00253 132 aa19.54■□□□□ 0.72
PDZRN3-202ENST00000308537 NVLO15381 856 aaKnown RBP19.54■□□□□ 0.72
PDZRN3-202ENST00000308537 KLK10O43240 276 aa19.54■□□□□ 0.72
PDZRN3-202ENST00000308537 VEGFDO43915 354 aa19.54■□□□□ 0.72
PDZRN3-202ENST00000308537 UGT1A9O60656 530 aa19.54■□□□□ 0.72
PDZRN3-202ENST00000308537 TJP3O95049 919 aa19.54■□□□□ 0.72
PDZRN3-202ENST00000308537 CCL4P13236 92 aa19.54■□□□□ 0.72
PDZRN3-202ENST00000308537 UGT1A6P19224 532 aa19.54■□□□□ 0.72
PDZRN3-202ENST00000308537 UGT1A1P22309 533 aa19.54■□□□□ 0.72
PDZRN3-202ENST00000308537 UGT1A4P22310 534 aa19.54■□□□□ 0.72
PDZRN3-202ENST00000308537 UGT1A3P35503 534 aa19.54■□□□□ 0.72
PDZRN3-202ENST00000308537 SPAM1P38567 509 aa19.54■□□□□ 0.72
PDZRN3-202ENST00000308537 GEMP55040 296 aa19.54■□□□□ 0.72
PDZRN3-202ENST00000308537 GPLD1P80108 840 aa19.54■□□□□ 0.72
PDZRN3-202ENST00000308537 HHEXQ03014 270 aa19.54■□□□□ 0.72
PDZRN3-202ENST00000308537 KIF5AQ12840 1032 aa19.54■□□□□ 0.72
PDZRN3-202ENST00000308537 KCTD11Q693B1 232 aa19.54■□□□□ 0.72
PDZRN3-202ENST00000308537 ITPRIPL1Q6GPH6 555 aa19.54■□□□□ 0.72
PDZRN3-202ENST00000308537 GLT6D1Q7Z4J2 308 aa19.54■□□□□ 0.72
PDZRN3-202ENST00000308537 SLC35B2Q8TB61 432 aa19.54■□□□□ 0.72
PDZRN3-202ENST00000308537 TMEM159Q96B96 161 aa19.54■□□□□ 0.72
PDZRN3-202ENST00000308537 CCDC74BQ96LY2 380 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms