RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 PQLC1Q8N2U9 271 aa12.56□□□□□ -0.4
USP38-201ENST00000307017 TNFAIP8L1Q8WVP5 186 aa12.56□□□□□ -0.4
USP38-201ENST00000307017 HSPBAP1Q96EW2 488 aa12.56□□□□□ -0.4
USP38-201ENST00000307017 TBC1D30Q9Y2I9 924 aa12.56□□□□□ -0.4
USP38-201ENST00000307017 HIF3AQ9Y2N7 669 aa12.56□□□□□ -0.4
USP38-201ENST00000307017 OR51F1A6NGY5 319 aa12.56□□□□□ -0.4
USP38-201ENST00000307017 GPR89AB7ZAQ6 455 aa12.56□□□□□ -0.4
USP38-201ENST00000307017 CH25HO95992 272 aa12.56□□□□□ -0.4
USP38-201ENST00000307017 GPR89BP0CG08 455 aa12.56□□□□□ -0.4
USP38-201ENST00000307017 DSC2Q02487 901 aa12.56□□□□□ -0.4
USP38-201ENST00000307017 ZNF155Q12901 538 aaPredicted RBP12.56□□□□□ -0.4
USP38-201ENST00000307017 EFR3AQ14156 821 aa12.56□□□□□ -0.4
USP38-201ENST00000307017 HECTD2Q5U5R9 776 aa12.56□□□□□ -0.4
USP38-201ENST00000307017 CFAP206Q8IYR0 622 aa12.56□□□□□ -0.4
USP38-201ENST00000307017 MPP5Q8N3R9 675 aa12.56□□□□□ -0.4
USP38-201ENST00000307017 TAMM41Q96BW9 452 aa12.56□□□□□ -0.4
USP38-201ENST00000307017 CYP3A43Q9HB55 503 aa12.56□□□□□ -0.4
USP38-201ENST00000307017 MLXQ9UH92 298 aa12.56□□□□□ -0.4
USP38-201ENST00000307017 EVLQ9UI08 416 aaPredicted RBP12.56□□□□□ -0.4
USP38-201ENST00000307017 MYO10Q9HD67 2058 aa12.56□□□□□ -0.4
USP38-201ENST00000307017 A0A0X1KG70 313 aa12.56□□□□□ -0.4
USP38-201ENST00000307017 ATP5C1P36542 298 aaKnown RBP12.56□□□□□ -0.4
USP38-201ENST00000307017 ZNF143P52747 638 aaPredicted RBP12.56□□□□□ -0.4
USP38-201ENST00000307017 SCGB2B2Q4G0G5 96 aa12.56□□□□□ -0.4
USP38-201ENST00000307017 SLC9B1Q4ZJI4 515 aa12.56□□□□□ -0.4
USP38-201ENST00000307017 OR4K2Q8NGD2 314 aa12.56□□□□□ -0.4
USP38-201ENST00000307017 FBXL8Q96CD0 374 aa12.56□□□□□ -0.4
USP38-201ENST00000307017 NANSQ9NR45 359 aa12.56□□□□□ -0.4
USP38-201ENST00000307017 C5orf51A6NDU8 294 aa12.56□□□□□ -0.4
USP38-201ENST00000307017 INPPL1O15357 1258 aa12.56□□□□□ -0.4
USP38-201ENST00000307017 LRIG2O94898 1065 aa12.56□□□□□ -0.4
USP38-201ENST00000307017 RPP14O95059 124 aaKnown RBP12.56□□□□□ -0.4
USP38-201ENST00000307017 CAPGP40121 348 aa12.56□□□□□ -0.4
USP38-201ENST00000307017 MNDAP41218 407 aa12.56□□□□□ -0.4
USP38-201ENST00000307017 HKDC1Q2TB90 917 aa12.56□□□□□ -0.4
USP38-201ENST00000307017 KIAA1161Q6NSJ0 714 aa12.56□□□□□ -0.4
USP38-201ENST00000307017 ESRP1Q6NXG1 681 aaKnown RBP12.56□□□□□ -0.4
USP38-201ENST00000307017 LRRC20Q8TCA0 184 aa12.56□□□□□ -0.4
USP38-201ENST00000307017 SEC14L3Q9UDX4 400 aa12.56□□□□□ -0.4
USP38-201ENST00000307017 DNMT3LQ9UJW3 386 aa12.56□□□□□ -0.4
USP38-201ENST00000307017 TBC1D3DA0A087WVF3 549 aa12.56□□□□□ -0.4
USP38-201ENST00000307017 TBC1D3IA0A087WXS9 549 aa12.56□□□□□ -0.4
USP38-201ENST00000307017 TBC1D3EA0A087X179 549 aa12.56□□□□□ -0.4
USP38-201ENST00000307017 TBC1D3KA0A087X1G2 549 aa12.56□□□□□ -0.4
USP38-201ENST00000307017 TBC1D3FA6NER0 549 aaPredicted RBP12.56□□□□□ -0.4
USP38-201ENST00000307017 TBC1D3LB9A6J9 549 aa12.56□□□□□ -0.4
USP38-201ENST00000307017 TNFRSF11BO00300 401 aa12.56□□□□□ -0.4
USP38-201ENST00000307017 LGALS2P05162 132 aa12.56□□□□□ -0.4
USP38-201ENST00000307017 TBC1D3HP0C7X1 549 aa12.56□□□□□ -0.4
USP38-201ENST00000307017 TBC1D3GQ6DHY5 549 aa12.56□□□□□ -0.4
USP38-201ENST00000307017 TBC1D3CQ6IPX1 549 aa12.56□□□□□ -0.4
USP38-201ENST00000307017 UNC5BQ8IZJ1 945 aa12.56□□□□□ -0.4
USP38-201ENST00000307017 TBC1D3Q8IZP1 549 aaPredicted RBP12.56□□□□□ -0.4
USP38-201ENST00000307017 ALG3Q92685 438 aa12.56□□□□□ -0.4
USP38-201ENST00000307017 MRPL57Q9BQC6 102 aaKnown RBP12.56□□□□□ -0.4
USP38-201ENST00000307017 RAPGEFL1Q9UHV5 662 aa12.56□□□□□ -0.4
USP38-201ENST00000307017 FCF1Q9Y324 198 aaKnown RBP12.56□□□□□ -0.4
USP38-201ENST00000307017 CCDC85CA6NKD9 419 aa12.55□□□□□ -0.4
USP38-201ENST00000307017 PAGE1O75459 146 aa12.55□□□□□ -0.4
USP38-201ENST00000307017 S100A1P23297 94 aa12.55□□□□□ -0.4
USP38-201ENST00000307017 GMFBP60983 142 aa12.55□□□□□ -0.4
USP38-201ENST00000307017 HYAL4Q2M3T9 481 aa12.55□□□□□ -0.4
USP38-201ENST00000307017 AFTPHQ6ULP2 937 aa12.55□□□□□ -0.4
USP38-201ENST00000307017 KBTBD8Q8NFY9 601 aa12.55□□□□□ -0.4
USP38-201ENST00000307017 CLEC4CQ8WTT0 213 aa12.55□□□□□ -0.4
USP38-201ENST00000307017 EBF4Q9BQW3 602 aa12.55□□□□□ -0.4
USP38-201ENST00000307017 REXO2Q9Y3B8 237 aaKnown RBP12.55□□□□□ -0.4
USP38-201ENST00000307017 RAP2CQ9Y3L5 183 aa12.55□□□□□ -0.4
USP38-201ENST00000307017 CLTCQ00610 1675 aaKnown RBP12.55□□□□□ -0.4
USP38-201ENST00000307017 DNTTP04053 509 aa12.55□□□□□ -0.4
USP38-201ENST00000307017 MAGEA12P43365 314 aa12.55□□□□□ -0.4
USP38-201ENST00000307017 CDK9P50750 372 aaKnown RBP12.55□□□□□ -0.4
USP38-201ENST00000307017 SREBF2Q12772 1141 aa12.55□□□□□ -0.4
USP38-201ENST00000307017 DLG1Q12959 904 aa12.55□□□□□ -0.4
USP38-201ENST00000307017 DUSP4Q13115 394 aa12.55□□□□□ -0.4
USP38-201ENST00000307017 RETSATQ6NUM9 610 aa12.55□□□□□ -0.4
USP38-201ENST00000307017 SFRP1Q8N474 314 aa12.55□□□□□ -0.4
USP38-201ENST00000307017 OR2T12Q8NG77 320 aa12.55□□□□□ -0.4
USP38-201ENST00000307017 P2RY11Q96G91 374 aa12.55□□□□□ -0.4
USP38-201ENST00000307017 ZNF350Q9GZX5 532 aa12.55□□□□□ -0.4
USP38-201ENST00000307017 IFT46Q9NQC8 304 aa12.55□□□□□ -0.4
USP38-201ENST00000307017 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.55□□□□□ -0.4
USP38-201ENST00000307017 OR6C70A6NIJ9 312 aa12.55□□□□□ -0.4
USP38-201ENST00000307017 KHNYNO15037 678 aaKnown RBP12.55□□□□□ -0.4
USP38-201ENST00000307017 PRLP01236 227 aa12.55□□□□□ -0.4
USP38-201ENST00000307017 GBAP04062 536 aa12.55□□□□□ -0.4
USP38-201ENST00000307017 GGT5P36269 586 aa12.55□□□□□ -0.4
USP38-201ENST00000307017 ASMTP46597 345 aa12.55□□□□□ -0.4
USP38-201ENST00000307017 VLDLRP98155 873 aa12.55□□□□□ -0.4
USP38-201ENST00000307017 CRYBG2Q8N1P7 616 aa12.55□□□□□ -0.4
USP38-201ENST00000307017 TEX19Q8NA77 164 aa12.55□□□□□ -0.4
USP38-201ENST00000307017 ZYG11BQ9C0D3 744 aa12.55□□□□□ -0.4
USP38-201ENST00000307017 IRF2BPLQ9H1B7 796 aa12.55□□□□□ -0.4
USP38-201ENST00000307017 BAIAP2Q9UQB8 552 aa12.55□□□□□ -0.4
USP38-201ENST00000307017 TMX2Q9Y320 296 aa12.55□□□□□ -0.4
USP38-201ENST00000307017 PGAM2P15259 253 aa12.55□□□□□ -0.4
USP38-201ENST00000307017 TLX1P31314 330 aaPredicted RBP12.55□□□□□ -0.4
USP38-201ENST00000307017 ZNF135P52742 658 aaPredicted RBP12.55□□□□□ -0.4
USP38-201ENST00000307017 PHC1P78364 1004 aa12.55□□□□□ -0.4
USP38-201ENST00000307017 RNASEH2BQ5TBB1 312 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms