RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 RIPOR1Q6ZS17 1223 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 RTL10Q7L3V2 364 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 NET1Q7Z628 596 aaPredicted RBP6.49□□□□□ -1.37
USP47-201ENST00000305481 C7orf61Q8IZ16 206 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 DEFB107AQ8IZN7 70 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 ARHGAP24Q8N264 748 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 ING5Q8WYH8 240 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 FAR2Q96K12 515 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 KCNA7Q96RP8 456 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 C19orf43Q9BQ61 176 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 TUBB1Q9H4B7 451 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 ASB8Q9H765 288 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 SARS2Q9NP81 518 aaKnown RBP6.49□□□□□ -1.37
USP47-201ENST00000305481 ATP6AP2A0A1C7CYW4 349 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 NCF1BA6NI72 391 aaPredicted RBP6.48□□□□□ -1.37
USP47-201ENST00000305481 AGAP14A8MT82 685 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 NCF1CA8MVU1 366 aaPredicted RBP6.48□□□□□ -1.37
USP47-201ENST00000305481 ATP6AP2O75787 350 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 PSMG1O95456 288 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 NCF1P14598 390 aaPredicted RBP6.48□□□□□ -1.37
USP47-201ENST00000305481 CCNG1P51959 295 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 ECT2LQ008S8 904 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 UBE3AQ05086 875 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 RCN1Q15293 331 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 ARHGAP15Q53QZ3 475 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 CARD16Q5EG05 197 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 LRRC66Q68CR7 880 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 CERS6Q6ZMG9 384 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 Q6ZVU0 165 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 LARP4Q71RC2 724 aaKnown RBP eCLIP6.48□□□□□ -1.37
USP47-201ENST00000305481 SNX20Q7Z614 316 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 KIAA0907Q7Z7F0 614 aaPredicted RBP6.48□□□□□ -1.37
USP47-201ENST00000305481 FBXO39Q8N4B4 442 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 NAT16Q8N8M0 369 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 OR2A12Q8NGT7 310 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 RP9Q8TA86 221 aaKnown RBP6.48□□□□□ -1.37
USP47-201ENST00000305481 KCNV2Q8TDN2 545 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 TRPC4APQ8TEL6 797 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 SORCS1Q8WY21 1168 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 ESAMQ96AP7 390 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 PLEKHG4BQ96PX9 1271 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 CPEB1Q9BZB8 566 aaKnown RBP6.48□□□□□ -1.37
USP47-201ENST00000305481 CIPCQ9C0C6 399 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 SUV39H2Q9H5I1 410 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 NOP53Q9NZM5 478 aaKnown RBP6.48□□□□□ -1.37
USP47-201ENST00000305481 CDH22Q9UJ99 828 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 ZNF225Q9UK10 706 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 DHRS7Q9Y394 339 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 COMMD10Q9Y6G5 202 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 GLYATL1P3A0A0U1RQE8 302 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 GOLGA8CPA6NN73 597 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 E5RI56 91 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 AIM2O14862 343 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 PFDN6O15212 129 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 CCNT2O60583 730 aaKnown RBP6.48□□□□□ -1.37
USP47-201ENST00000305481 TBX10O75333 385 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 PDE5AO76074 875 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 RPS17P08708 135 aaKnown RBP6.48□□□□□ -1.37
USP47-201ENST00000305481 HNRNPA1P09651 372 aaKnown RBP eCLIP6.48□□□□□ -1.37
USP47-201ENST00000305481 ACRV1P26436 265 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 PRDX3P30048 256 aaKnown RBP6.48□□□□□ -1.37
USP47-201ENST00000305481 ADSLP30566 484 aaPredicted RBP6.48□□□□□ -1.37
USP47-201ENST00000305481 CLCQ05315 142 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 LRRC73Q5JTD7 316 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 KANK2Q63ZY3 851 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 UGT3A1Q6NUS8 523 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 RBM23Q86U06 439 aaKnown RBP6.48□□□□□ -1.37
USP47-201ENST00000305481 HPS6Q86YV9 775 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 CLYBLQ8N0X4 340 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 STK40Q8N2I9 435 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 CBARPQ8N350 705 aaPredicted RBP6.48□□□□□ -1.37
USP47-201ENST00000305481 ITFG1Q8TB96 612 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 NRG4Q8WWG1 115 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 RSPRY1Q96DX4 576 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 PDLIM5Q96HC4 596 aaKnown RBP6.48□□□□□ -1.37
USP47-201ENST00000305481 MRGPRX3Q96LB0 322 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 MCCC1Q96RQ3 725 aaPredicted RBP6.48□□□□□ -1.37
USP47-201ENST00000305481 TUBGCP5Q96RT8 1024 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 C1QTNF3Q9BXJ4 246 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 CEP44Q9C0F1 390 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 ZDHHC6Q9H6R6 413 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 FBRSL1Q9HCM7 1045 aaKnown RBP6.48□□□□□ -1.37
USP47-201ENST00000305481 MID1IP1Q9NPA3 183 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 SEMA4BQ9NPR2 832 aaPredicted RBP6.48□□□□□ -1.37
USP47-201ENST00000305481 C15orf41Q9Y2V0 281 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 POP4O95707 220 aaKnown RBP6.48□□□□□ -1.37
USP47-201ENST00000305481 UGT2B4P06133 528 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 HSPA1AP0DMV8 641 aaKnown RBP6.48□□□□□ -1.37
USP47-201ENST00000305481 HSPA1BP0DMV9 641 aaKnown RBP6.48□□□□□ -1.37
USP47-201ENST00000305481 ITGB6P18564 788 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 RPS3P23396 243 aaKnown RBP eCLIP6.48□□□□□ -1.37
USP47-201ENST00000305481 PTDSS1P48651 473 aaKnown RBP6.48□□□□□ -1.37
USP47-201ENST00000305481 GTF2A1P52655 376 aaPredicted RBP6.48□□□□□ -1.37
USP47-201ENST00000305481 CYLC2Q14093 348 aaPredicted RBP6.48□□□□□ -1.37
USP47-201ENST00000305481 PTK2BQ14289 1009 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 GEN1Q17RS7 908 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 C18orf21Q32NC0 220 aaPredicted RBP6.48□□□□□ -1.37
USP47-201ENST00000305481 SBSNQ6UWP8 590 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 TPRG1Q6ZUI0 275 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 RAB44Q7Z6P3 723 aaPredicted RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms