RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 AHI1Q8N157 1196 aa19.25■□□□□ 0.67
HOXC4-201ENST00000303406 ZNF483Q8TF39 744 aaPredicted RBP19.25■□□□□ 0.67
HOXC4-201ENST00000303406 EXT2Q93063 718 aa19.25■□□□□ 0.67
HOXC4-201ENST00000303406 RPL10LQ96L21 214 aaKnown RBP19.25■□□□□ 0.67
HOXC4-201ENST00000303406 HTATIP2Q9BUP3 242 aa19.25■□□□□ 0.67
HOXC4-201ENST00000303406 NUSAP1Q9BXS6 441 aaKnown RBP19.25■□□□□ 0.67
HOXC4-201ENST00000303406 LATS2Q9NRM7 1088 aa19.25■□□□□ 0.67
HOXC4-201ENST00000303406 PCDH10Q9P2E7 1040 aa19.25■□□□□ 0.67
HOXC4-201ENST00000303406 STOML1Q9UBI4 398 aa19.25■□□□□ 0.67
HOXC4-201ENST00000303406 LOC100653049A0A140TA62 436 aa19.24■□□□□ 0.67
HOXC4-201ENST00000303406 SKAP2O75563 359 aaPredicted RBP19.24■□□□□ 0.67
HOXC4-201ENST00000303406 KRT34O76011 436 aa19.24■□□□□ 0.67
HOXC4-201ENST00000303406 MLYCDO95822 493 aa19.24■□□□□ 0.67
HOXC4-201ENST00000303406 EEF1DP29692 281 aaKnown RBP19.24■□□□□ 0.67
HOXC4-201ENST00000303406 IRS1P35568 1242 aa19.24■□□□□ 0.67
HOXC4-201ENST00000303406 CLCQ05315 142 aa19.24■□□□□ 0.67
HOXC4-201ENST00000303406 TMEM198Q66K66 360 aa19.24■□□□□ 0.67
HOXC4-201ENST00000303406 PTRHD1Q6GMV3 140 aaKnown RBP19.24■□□□□ 0.67
HOXC4-201ENST00000303406 LARP4Q71RC2 724 aaKnown RBP eCLIP19.24■□□□□ 0.67
HOXC4-201ENST00000303406 ADAMTSL2Q86TH1 951 aa19.24■□□□□ 0.67
HOXC4-201ENST00000303406 ADIPOR2Q86V24 386 aa19.24■□□□□ 0.67
HOXC4-201ENST00000303406 GPSM1Q86YR5 675 aa19.24■□□□□ 0.67
HOXC4-201ENST00000303406 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.24■□□□□ 0.67
HOXC4-201ENST00000303406 CPNE9Q8IYJ1 553 aa19.24■□□□□ 0.67
HOXC4-201ENST00000303406 KYQ8NBH2 561 aa19.24■□□□□ 0.67
HOXC4-201ENST00000303406 EEF1AKMT1Q8WVE0 214 aa19.24■□□□□ 0.67
HOXC4-201ENST00000303406 PPP1R36Q96LQ0 422 aa19.24■□□□□ 0.67
HOXC4-201ENST00000303406 PLEKHG4BQ96PX9 1271 aa19.24■□□□□ 0.67
HOXC4-201ENST00000303406 STX18Q9P2W9 335 aaKnown RBP19.24■□□□□ 0.67
HOXC4-201ENST00000303406 FBXO10Q9UK96 956 aa19.24■□□□□ 0.67
HOXC4-201ENST00000303406 C15orf41Q9Y2V0 281 aa19.24■□□□□ 0.67
HOXC4-201ENST00000303406 UBDO15205 165 aa19.23■□□□□ 0.67
HOXC4-201ENST00000303406 FKBP6O75344 327 aa19.23■□□□□ 0.67
HOXC4-201ENST00000303406 VPS4BO75351 444 aa19.23■□□□□ 0.67
HOXC4-201ENST00000303406 SIX3O95343 332 aaPredicted RBP19.23■□□□□ 0.67
HOXC4-201ENST00000303406 RGS4P49798 205 aa19.23■□□□□ 0.67
HOXC4-201ENST00000303406 POLR2LP62875 67 aaKnown RBP19.23■□□□□ 0.67
HOXC4-201ENST00000303406 SH3BP2P78314 561 aa19.23■□□□□ 0.67
HOXC4-201ENST00000303406 LY6G5CQ5SRR4 150 aa19.23■□□□□ 0.67
HOXC4-201ENST00000303406 AAGABQ6PD74 315 aa19.23■□□□□ 0.67
HOXC4-201ENST00000303406 RIPOR1Q6ZS17 1223 aa19.23■□□□□ 0.67
HOXC4-201ENST00000303406 RPS27LQ71UM5 84 aaKnown RBP19.23■□□□□ 0.67
HOXC4-201ENST00000303406 MYLK4Q86YV6 388 aaPredicted RBP19.23■□□□□ 0.67
HOXC4-201ENST00000303406 DEFB107AQ8IZN7 70 aa19.23■□□□□ 0.67
HOXC4-201ENST00000303406 CHCHD4Q8N4Q1 142 aa19.23■□□□□ 0.67
HOXC4-201ENST00000303406 DTX3LQ8TDB6 740 aa19.23■□□□□ 0.67
HOXC4-201ENST00000303406 JADE3Q92613 823 aa19.23■□□□□ 0.67
HOXC4-201ENST00000303406 FAM136AQ96C01 138 aa19.23■□□□□ 0.67
HOXC4-201ENST00000303406 ULK4Q96C45 1275 aa19.23■□□□□ 0.67
HOXC4-201ENST00000303406 C19orf60Q96EN9 201 aa19.23■□□□□ 0.67
HOXC4-201ENST00000303406 PANX3Q96QZ0 392 aa19.23■□□□□ 0.67
HOXC4-201ENST00000303406 MID1IP1Q9NPA3 183 aa19.23■□□□□ 0.67
HOXC4-201ENST00000303406 CDH22Q9UJ99 828 aa19.23■□□□□ 0.67
HOXC4-201ENST00000303406 CRLS1Q9UJA2 301 aa19.23■□□□□ 0.67
HOXC4-201ENST00000303406 NUP210Q8TEM1 1887 aaPredicted RBP19.23■□□□□ 0.67
HOXC4-201ENST00000303406 A0A0U1RQS6 177 aa19.22■□□□□ 0.67
HOXC4-201ENST00000303406 TSPAN11A1L157 253 aa19.22■□□□□ 0.67
HOXC4-201ENST00000303406 NPIPB15A6NHN6 443 aaPredicted RBP19.22■□□□□ 0.67
HOXC4-201ENST00000303406 ACADVLP49748 655 aa19.22■□□□□ 0.67
HOXC4-201ENST00000303406 MTTPP55157 894 aa19.22■□□□□ 0.67
HOXC4-201ENST00000303406 PTK2BQ14289 1009 aa19.22■□□□□ 0.67
HOXC4-201ENST00000303406 CHRNA6Q15825 494 aa19.22■□□□□ 0.67
HOXC4-201ENST00000303406 C1orf146Q5VVC0 180 aa19.22■□□□□ 0.67
HOXC4-201ENST00000303406 BRAT1Q6PJG6 821 aa19.22■□□□□ 0.67
HOXC4-201ENST00000303406 CYHR1Q6ZMK1 362 aa19.22■□□□□ 0.67
HOXC4-201ENST00000303406 DPY19L3Q6ZPD9 716 aa19.22■□□□□ 0.67
HOXC4-201ENST00000303406 HOMEZQ8IX15 550 aa19.22■□□□□ 0.67
HOXC4-201ENST00000303406 ADGRG2Q8IZP9 1017 aa19.22■□□□□ 0.67
HOXC4-201ENST00000303406 NXPE1Q8N323 547 aa19.22■□□□□ 0.67
HOXC4-201ENST00000303406 WFIKKN2Q8TEU8 576 aa19.22■□□□□ 0.67
HOXC4-201ENST00000303406 ZNF707Q96C28 371 aaPredicted RBP19.22■□□□□ 0.67
HOXC4-201ENST00000303406 CLPTM1LQ96KA5 538 aa19.22■□□□□ 0.67
HOXC4-201ENST00000303406 SERPINI1Q99574 410 aa19.22■□□□□ 0.67
HOXC4-201ENST00000303406 EFCAB1Q9HAE3 211 aa19.22■□□□□ 0.67
HOXC4-201ENST00000303406 UTP6Q9NYH9 597 aaKnown RBP19.22■□□□□ 0.67
HOXC4-201ENST00000303406 PCTPQ9UKL6 214 aa19.22■□□□□ 0.67
HOXC4-201ENST00000303406 ERVW-1Q9UQF0 538 aa19.22■□□□□ 0.67
HOXC4-201ENST00000303406 FNDC3AQ9Y2H6 1198 aaKnown RBP19.22■□□□□ 0.67
HOXC4-201ENST00000303406 EIF3FO00303 357 aaPredicted RBP19.21■□□□□ 0.67
HOXC4-201ENST00000303406 SNX2O60749 519 aa19.21■□□□□ 0.67
HOXC4-201ENST00000303406 GPC4O75487 556 aa19.21■□□□□ 0.67
HOXC4-201ENST00000303406 ZNF30P17039 623 aa19.21■□□□□ 0.67
HOXC4-201ENST00000303406 POLR2EP19388 210 aaKnown RBP19.21■□□□□ 0.67
HOXC4-201ENST00000303406 DGKAP23743 735 aa19.21■□□□□ 0.67
HOXC4-201ENST00000303406 NFKBIAP25963 317 aa19.21■□□□□ 0.67
HOXC4-201ENST00000303406 CDH13P55290 713 aa19.21■□□□□ 0.67
HOXC4-201ENST00000303406 TBL3Q12788 808 aaKnown RBP19.21■□□□□ 0.67
HOXC4-201ENST00000303406 GDPD4Q6W3E5 623 aa19.21■□□□□ 0.67
HOXC4-201ENST00000303406 GRASPQ7Z6J2 395 aaPredicted RBP19.21■□□□□ 0.67
HOXC4-201ENST00000303406 PGAM4Q8N0Y7 254 aa19.21■□□□□ 0.67
HOXC4-201ENST00000303406 FBXW8Q8N3Y1 598 aa19.21■□□□□ 0.67
HOXC4-201ENST00000303406 CELF5Q8N6W0 485 aaKnown RBP19.21■□□□□ 0.67
HOXC4-201ENST00000303406 HCAR2Q8TDS4 363 aa19.21■□□□□ 0.67
HOXC4-201ENST00000303406 CCT7Q99832 543 aa19.21■□□□□ 0.67
HOXC4-201ENST00000303406 LINC00597Q9H2U6 94 aa19.21■□□□□ 0.67
HOXC4-201ENST00000303406 ZDHHC6Q9H6R6 413 aa19.21■□□□□ 0.67
HOXC4-201ENST00000303406 PFDN4Q9NQP4 134 aa19.21■□□□□ 0.67
HOXC4-201ENST00000303406 ZDHHC3Q9NYG2 299 aa19.21■□□□□ 0.67
HOXC4-201ENST00000303406 FIS1Q9Y3D6 152 aa19.21■□□□□ 0.67
HOXC4-201ENST00000303406 TNPO3Q9Y5L0 923 aaKnown RBP19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms