RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 ZNF678Q5SXM1 525 aa9.23□□□□□ -0.93
PRDM9-201ENST00000296682 ZNF648Q5T619 568 aaPredicted RBP9.23□□□□□ -0.93
PRDM9-201ENST00000296682 MYO19Q96H55 970 aa9.23□□□□□ -0.93
PRDM9-201ENST00000296682 AARSD1Q9BTE6 412 aaKnown RBP9.23□□□□□ -0.93
PRDM9-201ENST00000296682 TDRD1Q9BXT4 1180 aaKnown RBP9.23□□□□□ -0.93
PRDM9-201ENST00000296682 NSUN3Q9H649 340 aaKnown RBP9.23□□□□□ -0.93
PRDM9-201ENST00000296682 LRCH1Q9Y2L9 728 aa9.23□□□□□ -0.93
PRDM9-201ENST00000296682 DNAJC15Q9Y5T4 150 aa9.23□□□□□ -0.93
PRDM9-201ENST00000296682 SCN8AQ9UQD0 1980 aa9.23□□□□□ -0.93
PRDM9-201ENST00000296682 LOC285095A0A1B0GVY8 99 aa9.23□□□□□ -0.93
PRDM9-201ENST00000296682 ILVBLA1L0T0 632 aa9.23□□□□□ -0.93
PRDM9-201ENST00000296682 OR2AG2A6NM03 316 aa9.23□□□□□ -0.93
PRDM9-201ENST00000296682 DRGXA6NNA5 263 aa9.23□□□□□ -0.93
PRDM9-201ENST00000296682 NRP2O60462 931 aa9.23□□□□□ -0.93
PRDM9-201ENST00000296682 SMNDC1O75940 238 aaKnown RBP eCLIP9.23□□□□□ -0.93
PRDM9-201ENST00000296682 ETS2P15036 469 aa9.23□□□□□ -0.93
PRDM9-201ENST00000296682 ITGALP20701 1170 aa9.23□□□□□ -0.93
PRDM9-201ENST00000296682 KCNK10P57789 538 aa9.23□□□□□ -0.93
PRDM9-201ENST00000296682 METTL21CQ5VZV1 264 aa9.23□□□□□ -0.93
PRDM9-201ENST00000296682 Q6ZVU0 165 aa9.23□□□□□ -0.93
PRDM9-201ENST00000296682 SPPL2CQ8IUH8 684 aa9.23□□□□□ -0.93
PRDM9-201ENST00000296682 PPM1MQ96MI6 270 aa9.23□□□□□ -0.93
PRDM9-201ENST00000296682 VN1R3Q9BXE9 311 aa9.23□□□□□ -0.93
PRDM9-201ENST00000296682 ATG10Q9H0Y0 220 aa9.23□□□□□ -0.93
PRDM9-201ENST00000296682 LINC00597Q9H2U6 94 aa9.23□□□□□ -0.93
PRDM9-201ENST00000296682 NDUFAF1Q9Y375 327 aa9.23□□□□□ -0.93
PRDM9-201ENST00000296682 DOCK6Q96HP0 2047 aa9.22□□□□□ -0.93
PRDM9-201ENST00000296682 TMEM189-UBE2V1I3L0A0 370 aa9.22□□□□□ -0.93
PRDM9-201ENST00000296682 SOD2P04179 222 aa9.22□□□□□ -0.93
PRDM9-201ENST00000296682 EFNA1P20827 205 aaPredicted RBP9.22□□□□□ -0.93
PRDM9-201ENST00000296682 TTPAP49638 278 aa9.22□□□□□ -0.93
PRDM9-201ENST00000296682 HERVK_113P63132 956 aa9.22□□□□□ -0.93
PRDM9-201ENST00000296682 HMGCS1Q01581 520 aa9.22□□□□□ -0.93
PRDM9-201ENST00000296682 PLOD1Q02809 727 aaPredicted RBP9.22□□□□□ -0.93
PRDM9-201ENST00000296682 RING1Q06587 406 aa9.22□□□□□ -0.93
PRDM9-201ENST00000296682 MRPL58Q14197 206 aaKnown RBP9.22□□□□□ -0.93
PRDM9-201ENST00000296682 CHRNA6Q15825 494 aa9.22□□□□□ -0.93
PRDM9-201ENST00000296682 TMEM259Q4ZIN3 620 aa9.22□□□□□ -0.93
PRDM9-201ENST00000296682 MTX3Q5HYI7 312 aa9.22□□□□□ -0.93
PRDM9-201ENST00000296682 RARS2Q5T160 578 aaKnown RBP9.22□□□□□ -0.93
PRDM9-201ENST00000296682 ZNF683Q8IZ20 524 aa9.22□□□□□ -0.93
PRDM9-201ENST00000296682 PCYOX1LQ8NBM8 494 aa9.22□□□□□ -0.93
PRDM9-201ENST00000296682 HJURPQ8NCD3 748 aaPredicted RBP9.22□□□□□ -0.93
PRDM9-201ENST00000296682 ACTRT2Q8TDY3 377 aa9.22□□□□□ -0.93
PRDM9-201ENST00000296682 CDK5RAP1Q96SZ6 601 aaKnown RBP9.22□□□□□ -0.93
PRDM9-201ENST00000296682 CIB1Q99828 191 aa9.22□□□□□ -0.93
PRDM9-201ENST00000296682 TCF25Q9BQ70 676 aa9.22□□□□□ -0.93
PRDM9-201ENST00000296682 ERVK-6Q9BXR3 956 aa9.22□□□□□ -0.93
PRDM9-201ENST00000296682 ZBTB26Q9HCK0 441 aa9.22□□□□□ -0.93
PRDM9-201ENST00000296682 BCAP29Q9UHQ4 241 aa9.22□□□□□ -0.93
PRDM9-201ENST00000296682 IKZF3Q9UKT9 509 aa9.22□□□□□ -0.93
PRDM9-201ENST00000296682 KANSL1LA0AUZ9 987 aa9.22□□□□□ -0.93
PRDM9-201ENST00000296682 KPNA3O00505 521 aaPredicted RBP9.22□□□□□ -0.93
PRDM9-201ENST00000296682 PRMT5O14744 637 aaPredicted RBP9.22□□□□□ -0.93
PRDM9-201ENST00000296682 FGF18O76093 207 aa9.22□□□□□ -0.93
PRDM9-201ENST00000296682 LRATO95237 230 aa9.22□□□□□ -0.93
PRDM9-201ENST00000296682 WISP3O95389 354 aaPredicted RBP9.22□□□□□ -0.93
PRDM9-201ENST00000296682 CAPN1P07384 714 aa9.22□□□□□ -0.93
PRDM9-201ENST00000296682 ZNF7P17097 686 aaPredicted RBP9.22□□□□□ -0.93
PRDM9-201ENST00000296682 CKMT2P17540 419 aa9.22□□□□□ -0.93
PRDM9-201ENST00000296682 NFKBIAP25963 317 aa9.22□□□□□ -0.93
PRDM9-201ENST00000296682 HK2P52789 917 aa9.22□□□□□ -0.93
PRDM9-201ENST00000296682 PPP1R8Q12972 351 aaKnown RBP9.22□□□□□ -0.93
PRDM9-201ENST00000296682 MSLNQ13421 630 aaPredicted RBP9.22□□□□□ -0.93
PRDM9-201ENST00000296682 TAF1AQ15573 450 aaPredicted RBP9.22□□□□□ -0.93
PRDM9-201ENST00000296682 C6orf52Q5T4I8 152 aa9.22□□□□□ -0.93
PRDM9-201ENST00000296682 REP15Q6BDI9 236 aa9.22□□□□□ -0.93
PRDM9-201ENST00000296682 KRT80Q6KB66 452 aa9.22□□□□□ -0.93
PRDM9-201ENST00000296682 MYO1HQ8N1T3 1032 aa9.22□□□□□ -0.93
PRDM9-201ENST00000296682 SCAMP4Q969E2 229 aa9.22□□□□□ -0.93
PRDM9-201ENST00000296682 TMEM74Q96NL1 305 aa9.22□□□□□ -0.93
PRDM9-201ENST00000296682 THUMPD3Q9BV44 507 aaKnown RBP9.22□□□□□ -0.93
PRDM9-201ENST00000296682 SPATA16Q9BXB7 569 aa9.22□□□□□ -0.93
PRDM9-201ENST00000296682 SUFUQ9UMX1 484 aa9.22□□□□□ -0.93
PRDM9-201ENST00000296682 PHF24Q9UPV7 400 aa9.22□□□□□ -0.93
PRDM9-201ENST00000296682 CCL26Q9Y258 94 aa9.22□□□□□ -0.93
PRDM9-201ENST00000296682 TARM1B6A8C7 271 aa9.21□□□□□ -0.93
PRDM9-201ENST00000296682 TGM5O43548 720 aa9.21□□□□□ -0.93
PRDM9-201ENST00000296682 GMNNO75496 209 aa9.21□□□□□ -0.93
PRDM9-201ENST00000296682 ACADSP16219 412 aa9.21□□□□□ -0.93
PRDM9-201ENST00000296682 LBPP18428 481 aa9.21□□□□□ -0.93
PRDM9-201ENST00000296682 APLP1P51693 650 aa9.21□□□□□ -0.93
PRDM9-201ENST00000296682 DGKQP52824 942 aa9.21□□□□□ -0.93
PRDM9-201ENST00000296682 LAMB3Q13751 1172 aa9.21□□□□□ -0.93
PRDM9-201ENST00000296682 IL23RQ5VWK5 629 aa9.21□□□□□ -0.93
PRDM9-201ENST00000296682 SLC8B1Q6J4K2 584 aa9.21□□□□□ -0.93
PRDM9-201ENST00000296682 ANGPTL8Q6UXH0 198 aa9.21□□□□□ -0.93
PRDM9-201ENST00000296682 TMEM25Q86YD3 366 aa9.21□□□□□ -0.93
PRDM9-201ENST00000296682 C2orf73Q8N5S3 287 aaPredicted RBP9.21□□□□□ -0.93
PRDM9-201ENST00000296682 KLHL23Q8NBE8 558 aa9.21□□□□□ -0.93
PRDM9-201ENST00000296682 KREMEN2Q8NCW0 462 aa9.21□□□□□ -0.93
PRDM9-201ENST00000296682 NCLNQ969V3 563 aa9.21□□□□□ -0.93
PRDM9-201ENST00000296682 MIEF2Q96C03 454 aa9.21□□□□□ -0.93
PRDM9-201ENST00000296682 TCEAL4Q96EI5 215 aa9.21□□□□□ -0.93
PRDM9-201ENST00000296682 GSTO2Q9H4Y5 243 aa9.21□□□□□ -0.93
PRDM9-201ENST00000296682 ACTR8Q9H981 624 aa9.21□□□□□ -0.93
PRDM9-201ENST00000296682 GEMIN8Q9NWZ8 242 aaKnown RBP9.21□□□□□ -0.93
PRDM9-201ENST00000296682 ARL15Q9NXU5 204 aa9.21□□□□□ -0.93
PRDM9-201ENST00000296682 ZNF711Q9Y462 761 aa9.21□□□□□ -0.93
PRDM9-201ENST00000296682 ASB1Q9Y576 335 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms