RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 IL17CQ9P0M4 197 aa11.68□□□□□ -0.54
RHO-201ENST00000296271 PCTPQ9UKL6 214 aa11.68□□□□□ -0.54
RHO-201ENST00000296271 ZNF711Q9Y462 761 aa11.68□□□□□ -0.54
RHO-201ENST00000296271 PRSS51A0A1B0GVH4 220 aa11.67□□□□□ -0.54
RHO-201ENST00000296271 NME4O00746 187 aa11.67□□□□□ -0.54
RHO-201ENST00000296271 KATNA1O75449 491 aa11.67□□□□□ -0.54
RHO-201ENST00000296271 ADSLP30566 484 aaPredicted RBP11.67□□□□□ -0.54
RHO-201ENST00000296271 CD70P32970 193 aa11.67□□□□□ -0.54
RHO-201ENST00000296271 GDF5P43026 501 aa11.67□□□□□ -0.54
RHO-201ENST00000296271 BTG3Q14201 252 aaPredicted RBP11.67□□□□□ -0.54
RHO-201ENST00000296271 TRIM25Q14258 630 aaKnown RBP11.67□□□□□ -0.54
RHO-201ENST00000296271 RBBP7Q16576 425 aa11.67□□□□□ -0.54
RHO-201ENST00000296271 KLHDC10Q6PID8 442 aa11.67□□□□□ -0.54
RHO-201ENST00000296271 SLC39A5Q6ZMH5 540 aa11.67□□□□□ -0.54
RHO-201ENST00000296271 CHST9Q7L1S5 443 aa11.67□□□□□ -0.54
RHO-201ENST00000296271 SLC39A11Q8N1S5 342 aa11.67□□□□□ -0.54
RHO-201ENST00000296271 PAF1Q8N7H5 531 aa11.67□□□□□ -0.54
RHO-201ENST00000296271 FAR2Q96K12 515 aa11.67□□□□□ -0.54
RHO-201ENST00000296271 CD274Q9NZQ7 290 aa11.67□□□□□ -0.54
RHO-201ENST00000296271 MBD1Q9UIS9 605 aaPredicted RBP11.67□□□□□ -0.54
RHO-201ENST00000296271 TRMT6Q9UJA5 497 aaKnown RBP11.67□□□□□ -0.54
RHO-201ENST00000296271 INSL5Q9Y5Q6 135 aa11.67□□□□□ -0.54
RHO-201ENST00000296271 ZNF839A8K0R7 811 aa11.67□□□□□ -0.54
RHO-201ENST00000296271 E5RI56 91 aa11.67□□□□□ -0.54
RHO-201ENST00000296271 PSMC3P17980 439 aa11.67□□□□□ -0.54
RHO-201ENST00000296271 ATP6V1B2P21281 511 aa11.67□□□□□ -0.54
RHO-201ENST00000296271 GABRR2P28476 465 aa11.67□□□□□ -0.54
RHO-201ENST00000296271 UFM1P61960 85 aa11.67□□□□□ -0.54
RHO-201ENST00000296271 STX5Q13190 355 aa11.67□□□□□ -0.54
RHO-201ENST00000296271 RFTN1Q14699 578 aaPredicted RBP11.67□□□□□ -0.54
RHO-201ENST00000296271 ARMC12Q5T9G4 340 aa11.67□□□□□ -0.54
RHO-201ENST00000296271 MBOAT1Q6ZNC8 495 aa11.67□□□□□ -0.54
RHO-201ENST00000296271 RAB44Q7Z6P3 723 aaPredicted RBP11.67□□□□□ -0.54
RHO-201ENST00000296271 MFN1Q8IWA4 741 aa11.67□□□□□ -0.54
RHO-201ENST00000296271 AFAP1L2Q8N4X5 818 aa11.67□□□□□ -0.54
RHO-201ENST00000296271 TMEM102Q8N9M5 508 aaPredicted RBP11.67□□□□□ -0.54
RHO-201ENST00000296271 RIN3Q8TB24 985 aa11.67□□□□□ -0.54
RHO-201ENST00000296271 PIH1D2Q8WWB5 315 aa11.67□□□□□ -0.54
RHO-201ENST00000296271 PEX13Q92968 403 aa11.67□□□□□ -0.54
RHO-201ENST00000296271 LRGUKQ96M69 825 aa11.67□□□□□ -0.54
RHO-201ENST00000296271 CDK5RAP1Q96SZ6 601 aaKnown RBP11.67□□□□□ -0.54
RHO-201ENST00000296271 HGH1Q9BTY7 390 aa11.67□□□□□ -0.54
RHO-201ENST00000296271 TRMOQ9BU70 441 aa11.67□□□□□ -0.54
RHO-201ENST00000296271 SYTL2Q9HCH5 934 aa11.67□□□□□ -0.54
RHO-201ENST00000296271 CD300AQ9UGN4 299 aa11.67□□□□□ -0.54
RHO-201ENST00000296271 INTS6Q9UL03 887 aaKnown RBP11.67□□□□□ -0.54
RHO-201ENST00000296271 ASPDHA6ND91 283 aa11.66□□□□□ -0.54
RHO-201ENST00000296271 FXYD1O00168 92 aa11.66□□□□□ -0.54
RHO-201ENST00000296271 FZD6O60353 706 aa11.66□□□□□ -0.54
RHO-201ENST00000296271 CRCPO75575 148 aa11.66□□□□□ -0.54
RHO-201ENST00000296271 CKMP06732 381 aa11.66□□□□□ -0.54
RHO-201ENST00000296271 RPS17P08708 135 aaKnown RBP11.66□□□□□ -0.54
RHO-201ENST00000296271 CNPP09543 421 aaKnown RBP11.66□□□□□ -0.54
RHO-201ENST00000296271 CASP2P42575 452 aa11.66□□□□□ -0.54
RHO-201ENST00000296271 CLCN7P51798 805 aa11.66□□□□□ -0.54
RHO-201ENST00000296271 ERVPABLB-1P60509 514 aa11.66□□□□□ -0.54
RHO-201ENST00000296271 LCP2Q13094 533 aa11.66□□□□□ -0.54
RHO-201ENST00000296271 MED21Q13503 144 aa11.66□□□□□ -0.54
RHO-201ENST00000296271 IKBKEQ14164 716 aa11.66□□□□□ -0.54
RHO-201ENST00000296271 PDK3Q15120 406 aa11.66□□□□□ -0.54
RHO-201ENST00000296271 SLC44A4Q53GD3 710 aa11.66□□□□□ -0.54
RHO-201ENST00000296271 RABL3Q5HYI8 236 aa11.66□□□□□ -0.54
RHO-201ENST00000296271 DGKKQ5KSL6 1271 aa11.66□□□□□ -0.54
RHO-201ENST00000296271 ANKS6Q68DC2 871 aa11.66□□□□□ -0.54
RHO-201ENST00000296271 LETMD1Q6P1Q0 360 aa11.66□□□□□ -0.54
RHO-201ENST00000296271 IFNEQ86WN2 208 aa11.66□□□□□ -0.54
RHO-201ENST00000296271 CNBD2Q96M20 576 aa11.66□□□□□ -0.54
RHO-201ENST00000296271 ADGRE3Q9BY15 652 aa11.66□□□□□ -0.54
RHO-201ENST00000296271 PAK6Q9NQU5 681 aaPredicted RBP11.66□□□□□ -0.54
RHO-201ENST00000296271 ZDHHC7Q9NXF8 308 aa11.66□□□□□ -0.54
RHO-201ENST00000296271 CFAP97Q9P2B7 532 aa11.66□□□□□ -0.54
RHO-201ENST00000296271 CROTQ9UKG9 612 aa11.66□□□□□ -0.54
RHO-201ENST00000296271 CCL26Q9Y258 94 aa11.66□□□□□ -0.54
RHO-201ENST00000296271 C1orf232A0A0U1RR37 186 aa11.66□□□□□ -0.54
RHO-201ENST00000296271 A0A1W2PRU2 124 aa11.66□□□□□ -0.54
RHO-201ENST00000296271 E2F3O00716 465 aa11.66□□□□□ -0.54
RHO-201ENST00000296271 VPS26AO75436 327 aa11.66□□□□□ -0.54
RHO-201ENST00000296271 ZNF821O75541 412 aaPredicted RBP11.66□□□□□ -0.54
RHO-201ENST00000296271 TIPRLO75663 272 aa11.66□□□□□ -0.54
RHO-201ENST00000296271 BAIAP3O94812 1187 aa11.66□□□□□ -0.54
RHO-201ENST00000296271 PGM3O95394 542 aa11.66□□□□□ -0.54
RHO-201ENST00000296271 FGF4P08620 206 aa11.66□□□□□ -0.54
RHO-201ENST00000296271 CCL5P13501 91 aa11.66□□□□□ -0.54
RHO-201ENST00000296271 IL12AP29459 219 aa11.66□□□□□ -0.54
RHO-201ENST00000296271 ZFP36L2P47974 494 aaKnown RBP11.66□□□□□ -0.54
RHO-201ENST00000296271 VEPH1Q14D04 833 aa11.66□□□□□ -0.54
RHO-201ENST00000296271 TGFBIQ15582 683 aa11.66□□□□□ -0.54
RHO-201ENST00000296271 FUT11Q495W5 492 aa11.66□□□□□ -0.54
RHO-201ENST00000296271 PAGE3Q5JUK9 113 aa11.66□□□□□ -0.54
RHO-201ENST00000296271 HMBOX1Q6NT76 420 aa11.66□□□□□ -0.54
RHO-201ENST00000296271 C8orf82Q6P1X6 216 aaPredicted RBP11.66□□□□□ -0.54
RHO-201ENST00000296271 GPSM1Q86YR5 675 aa11.66□□□□□ -0.54
RHO-201ENST00000296271 ADGRG2Q8IZP9 1017 aa11.66□□□□□ -0.54
RHO-201ENST00000296271 ICA1LQ8NDH6 482 aa11.66□□□□□ -0.54
RHO-201ENST00000296271 DNAJB14Q8TBM8 379 aa11.66□□□□□ -0.54
RHO-201ENST00000296271 DLG3Q92796 817 aa11.66□□□□□ -0.54
RHO-201ENST00000296271 VOPP1Q96AW1 172 aa11.66□□□□□ -0.54
RHO-201ENST00000296271 ASB9Q96DX5 294 aa11.66□□□□□ -0.54
RHO-201ENST00000296271 TMEM74Q96NL1 305 aa11.66□□□□□ -0.54
RHO-201ENST00000296271 SLC29A1Q99808 456 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms