RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 OSBPL2Q9H1P3 480 aa12.71□□□□□ -0.37
PTCD1-201ENST00000292478 ITGB1BP2Q9UKP3 347 aa12.71□□□□□ -0.37
PTCD1-201ENST00000292478 OR10H1Q9Y4A9 318 aa12.71□□□□□ -0.37
PTCD1-201ENST00000292478 VIRMAQ69YN4 1812 aaKnown RBP12.71□□□□□ -0.38
PTCD1-201ENST00000292478 LRATO95237 230 aa12.71□□□□□ -0.38
PTCD1-201ENST00000292478 GOT2P00505 430 aaKnown RBP12.71□□□□□ -0.38
PTCD1-201ENST00000292478 DNAJB1P25685 340 aa12.71□□□□□ -0.38
PTCD1-201ENST00000292478 CHST9Q7L1S5 443 aa12.71□□□□□ -0.38
PTCD1-201ENST00000292478 NAT8LQ8N9F0 302 aa12.71□□□□□ -0.38
PTCD1-201ENST00000292478 FAM83DQ9H4H8 585 aa12.71□□□□□ -0.38
PTCD1-201ENST00000292478 TLR6Q9Y2C9 796 aa12.71□□□□□ -0.38
PTCD1-201ENST00000292478 FADS3Q9Y5Q0 445 aa12.71□□□□□ -0.38
PTCD1-201ENST00000292478 MYBPHLA2RUH7 354 aa12.7□□□□□ -0.38
PTCD1-201ENST00000292478 GTF2H2Q13888 395 aa12.7□□□□□ -0.38
PTCD1-201ENST00000292478 GTF2H2CQ6P1K8 395 aa12.7□□□□□ -0.38
PTCD1-201ENST00000292478 KLHL17Q6TDP4 642 aa12.7□□□□□ -0.38
PTCD1-201ENST00000292478 TMEM110Q86TL2 294 aa12.7□□□□□ -0.38
PTCD1-201ENST00000292478 HPS6Q86YV9 775 aa12.7□□□□□ -0.38
PTCD1-201ENST00000292478 CHPFQ8IZ52 775 aa12.7□□□□□ -0.38
PTCD1-201ENST00000292478 GLB1L3Q8NCI6 653 aaPredicted RBP12.7□□□□□ -0.38
PTCD1-201ENST00000292478 PLEKHG4BQ96PX9 1271 aa12.7□□□□□ -0.38
PTCD1-201ENST00000292478 GATA5Q9BWX5 397 aaPredicted RBP12.7□□□□□ -0.38
PTCD1-201ENST00000292478 SSR3Q9UNL2 185 aa12.7□□□□□ -0.38
PTCD1-201ENST00000292478 WWP2O00308 870 aa12.7□□□□□ -0.38
PTCD1-201ENST00000292478 PRAMEF1O95521 474 aa12.7□□□□□ -0.38
PTCD1-201ENST00000292478 NR2F6P10588 404 aa12.7□□□□□ -0.38
PTCD1-201ENST00000292478 IDH3AP50213 366 aa12.7□□□□□ -0.38
PTCD1-201ENST00000292478 POM121L1PQ3SYA9 428 aa12.7□□□□□ -0.38
PTCD1-201ENST00000292478 ZNF516Q92618 1163 aa12.7□□□□□ -0.38
PTCD1-201ENST00000292478 NOL11Q9H8H0 719 aaKnown RBP12.7□□□□□ -0.38
PTCD1-201ENST00000292478 SLC38A8A6NNN8 435 aa12.7□□□□□ -0.38
PTCD1-201ENST00000292478 ERAL1O75616 437 aaKnown RBP12.7□□□□□ -0.38
PTCD1-201ENST00000292478 RPIAP49247 311 aa12.7□□□□□ -0.38
PTCD1-201ENST00000292478 ESRP1Q6NXG1 681 aaKnown RBP12.7□□□□□ -0.38
PTCD1-201ENST00000292478 KRT74Q7RTS7 529 aa12.7□□□□□ -0.38
PTCD1-201ENST00000292478 SPATA22Q8NHS9 363 aa12.7□□□□□ -0.38
PTCD1-201ENST00000292478 HTATIP2Q9BUP3 242 aa12.7□□□□□ -0.38
PTCD1-201ENST00000292478 WDR12Q9GZL7 423 aaKnown RBP12.7□□□□□ -0.38
PTCD1-201ENST00000292478 TFB2MQ9H5Q4 396 aaKnown RBP12.7□□□□□ -0.38
PTCD1-201ENST00000292478 PTGFRNQ9P2B2 879 aa12.7□□□□□ -0.38
PTCD1-201ENST00000292478 WRAP73Q9P2S5 460 aaPredicted RBP12.7□□□□□ -0.38
PTCD1-201ENST00000292478 MRTO4Q9UKD2 239 aaKnown RBP12.7□□□□□ -0.38
PTCD1-201ENST00000292478 UGT2B4P06133 528 aa12.7□□□□□ -0.38
PTCD1-201ENST00000292478 SSR2P43308 183 aa12.7□□□□□ -0.38
PTCD1-201ENST00000292478 MAPK10P53779 464 aa12.7□□□□□ -0.38
PTCD1-201ENST00000292478 TAF13Q15543 124 aa12.7□□□□□ -0.38
PTCD1-201ENST00000292478 GJD3Q8N144 294 aa12.7□□□□□ -0.38
PTCD1-201ENST00000292478 LPGAT1Q92604 370 aa12.7□□□□□ -0.38
PTCD1-201ENST00000292478 DNAJC1Q96KC8 554 aaKnown RBP12.7□□□□□ -0.38
PTCD1-201ENST00000292478 APOLD1Q96LR9 279 aa12.7□□□□□ -0.38
PTCD1-201ENST00000292478 LMAN2LQ9H0V9 348 aa12.7□□□□□ -0.38
PTCD1-201ENST00000292478 LRRC37A3O60309 1634 aa12.7□□□□□ -0.38
PTCD1-201ENST00000292478 TIPRLO75663 272 aa12.7□□□□□ -0.38
PTCD1-201ENST00000292478 ZNF37AP17032 561 aaPredicted RBP12.7□□□□□ -0.38
PTCD1-201ENST00000292478 LMO2P25791 158 aa12.7□□□□□ -0.38
PTCD1-201ENST00000292478 TMC5Q6UXY8 1006 aa12.7□□□□□ -0.38
PTCD1-201ENST00000292478 PTCHD4Q6ZW05 846 aa12.7□□□□□ -0.38
PTCD1-201ENST00000292478 COMMD2Q86X83 199 aa12.7□□□□□ -0.38
PTCD1-201ENST00000292478 SLC22A17Q8WUG5 538 aa12.7□□□□□ -0.38
PTCD1-201ENST00000292478 RASSF5Q8WWW0 418 aa12.7□□□□□ -0.38
PTCD1-201ENST00000292478 DEFB118Q96PH6 123 aa12.7□□□□□ -0.38
PTCD1-201ENST00000292478 S100A13Q99584 98 aa12.7□□□□□ -0.38
PTCD1-201ENST00000292478 RBPJLQ9UBG7 517 aa12.7□□□□□ -0.38
PTCD1-201ENST00000292478 MGRN1O60291 552 aa12.69□□□□□ -0.38
PTCD1-201ENST00000292478 CDK14O94921 469 aa12.69□□□□□ -0.38
PTCD1-201ENST00000292478 IFNGP01579 166 aa12.69□□□□□ -0.38
PTCD1-201ENST00000292478 HERC3Q15034 1050 aa12.69□□□□□ -0.38
PTCD1-201ENST00000292478 SOWAHAQ2M3V2 549 aa12.69□□□□□ -0.38
PTCD1-201ENST00000292478 GCNT6Q5T4J0 391 aa12.69□□□□□ -0.38
PTCD1-201ENST00000292478 IL23RQ5VWK5 629 aa12.69□□□□□ -0.38
PTCD1-201ENST00000292478 THAP5Q7Z6K1 395 aa12.69□□□□□ -0.38
PTCD1-201ENST00000292478 HEATR4Q86WZ0 1026 aa12.69□□□□□ -0.38
PTCD1-201ENST00000292478 SVOPLQ8N434 492 aa12.69□□□□□ -0.38
PTCD1-201ENST00000292478 AASDHPPTQ9NRN7 309 aa12.69□□□□□ -0.38
PTCD1-201ENST00000292478 GULP1Q9UBP9 304 aa12.69□□□□□ -0.38
PTCD1-201ENST00000292478 NALCNQ8IZF0 1738 aa12.69□□□□□ -0.38
PTCD1-201ENST00000292478 PLK4O00444 970 aa12.69□□□□□ -0.38
PTCD1-201ENST00000292478 FPGTO14772 594 aa12.69□□□□□ -0.38
PTCD1-201ENST00000292478 IDSP22304 550 aa12.69□□□□□ -0.38
PTCD1-201ENST00000292478 PTX3P26022 381 aaPredicted RBP12.69□□□□□ -0.38
PTCD1-201ENST00000292478 NDUFV1P49821 464 aa12.69□□□□□ -0.38
PTCD1-201ENST00000292478 PSMD4P55036 377 aaKnown RBP12.69□□□□□ -0.38
PTCD1-201ENST00000292478 GDF10P55107 478 aa12.69□□□□□ -0.38
PTCD1-201ENST00000292478 CDCA2Q69YH5 1023 aaPredicted RBP12.69□□□□□ -0.38
PTCD1-201ENST00000292478 MED27Q6P2C8 311 aa12.69□□□□□ -0.38
PTCD1-201ENST00000292478 OR6K2Q8NGY2 324 aa12.69□□□□□ -0.38
PTCD1-201ENST00000292478 CLPTM1LQ96KA5 538 aa12.69□□□□□ -0.38
PTCD1-201ENST00000292478 TSSK3Q96PN8 268 aa12.69□□□□□ -0.38
PTCD1-201ENST00000292478 H0Y858 1186 aa12.69□□□□□ -0.38
PTCD1-201ENST00000292478 IRAK2O43187 625 aa12.69□□□□□ -0.38
PTCD1-201ENST00000292478 ERN1O75460 977 aaKnown RBP12.69□□□□□ -0.38
PTCD1-201ENST00000292478 UGT2B17O75795 530 aa12.69□□□□□ -0.38
PTCD1-201ENST00000292478 ITPKAP23677 461 aa12.69□□□□□ -0.38
PTCD1-201ENST00000292478 MYL9P24844 172 aa12.69□□□□□ -0.38
PTCD1-201ENST00000292478 BUD31P41223 144 aaPredicted RBP12.69□□□□□ -0.38
PTCD1-201ENST00000292478 MTHFRP42898 656 aa12.69□□□□□ -0.38
PTCD1-201ENST00000292478 LIPEQ05469 1076 aa12.69□□□□□ -0.38
PTCD1-201ENST00000292478 DLG1Q12959 904 aa12.69□□□□□ -0.38
PTCD1-201ENST00000292478 TCEAL1Q15170 157 aa12.69□□□□□ -0.38
PTCD1-201ENST00000292478 SLC5A9Q2M3M2 681 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms