RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 SPINT3P49223 89 aa8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 CCR3P51677 355 aa8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 CRADDP78560 199 aa8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 XIAPP98170 497 aa8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 CNTN1Q12860 1018 aa8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 ITGA9Q13797 1035 aa8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 TNFAIP8L3Q5GJ75 292 aa8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 FAM182AQ5T1J6 154 aa8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 MRNIPQ6NTE8 343 aa8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 KIAA1211LQ6NV74 962 aa8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 CERS6Q6ZMG9 384 aa8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 SLC44A2Q8IWA5 706 aaPredicted RBP8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 ZNF366Q8N895 744 aa8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 CXorf40AQ8TE69 158 aa8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 MED4Q9NPJ6 270 aa8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 ITM2CQ9NQX7 267 aa8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 KLHL14Q9P2G3 628 aa8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 ACTL7BQ9Y614 415 aa8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 DIDO1Q9BTC0 2240 aaKnown RBP8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 LAMA2P24043 3122 aaKnown RBP8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 HSPA4LO95757 839 aa8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 ELFN1P0C7U0 828 aa8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 CTPS1P17812 591 aa8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 RPS3P23396 243 aaKnown RBP eCLIP8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 GCAP28676 217 aa8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 DAB2P98082 770 aa8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 SLC9A5Q14940 896 aa8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 ESRP1Q6NXG1 681 aaKnown RBP8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 TMEM92Q6UXU6 159 aa8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 DENND6BQ8NEG7 585 aa8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 FAM174AQ8TBP5 190 aa8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 DCAKDQ8WVC6 231 aa8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 MFSD3Q96ES6 412 aa8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 DTD2Q96FN9 168 aa8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 CDKN2AIPNLQ96HQ2 116 aa8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 DNAJC1Q96KC8 554 aaKnown RBP8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 MRGPRX1Q96LB2 322 aa8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 LENG8Q96PV6 779 aaPredicted RBP8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 PAFAH2Q99487 392 aa8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 OMDQ99983 421 aa8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 PIH1D1Q9NWS0 290 aaKnown RBP8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 ZFATQ9P243 1243 aa8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 CCDC163A0A0D9SF12 145 aa8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 GLYATL1P3A0A0U1RQE8 302 aa8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 GOLGA8KD6RF30 607 aa8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 DCXO43602 365 aa8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 CCR5P51681 352 aa8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 TOMM20Q15388 145 aa8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 HENMT1Q5T8I9 393 aaKnown RBP8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 LIPIQ6XZB0 460 aa8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 TIFABQ6ZNK6 161 aa8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 DDIASQ8IXT1 998 aa8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 HDDC3Q8N4P3 179 aa8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 OR4K2Q8NGD2 314 aa8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 SGF29Q96ES7 293 aa8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 SIPA1Q96FS4 1042 aa8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 CCDC3Q9BQI4 270 aa8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 VCX3BQ9H321 246 aa8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 SSU72Q9NP77 194 aaKnown RBP8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 GGT7Q9UJ14 662 aa8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 DNAJC16Q9Y2G8 782 aa8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 IQANK1A0A1B0GTG1 560 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 GAPDHSO14556 408 aaPredicted RBP8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 CYP7B1O75881 506 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 GOT2P00505 430 aaKnown RBP8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 HOXC4P09017 264 aaPredicted RBP8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 KITP10721 976 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 BPIP17213 487 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 GM2AP17900 193 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 GABRG2P18507 467 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 NDUFV2P19404 249 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 ITGALP20701 1170 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 FOXN2P32314 431 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 GP5P40197 560 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 TTPAP49638 278 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 RPS21P63220 83 aaKnown RBP8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 PEX6Q13608 980 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 ITIH4Q14624 930 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 SPDYE7PQ495Y7 208 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 CWF19L1Q69YN2 538 aaKnown RBP8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 CILP2Q8IUL8 1156 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 TSTD1Q8NFU3 115 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 CLIP3Q96DZ5 547 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 LRGUKQ96M69 825 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 ZBTB18Q99592 522 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 RBBP8Q99708 897 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 C1QTNF7Q9BXJ2 289 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 POPDC3Q9HBV1 291 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 TMBIM4Q9HC24 238 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 SPASTQ9UBP0 616 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 SLC2A6Q9UGQ3 507 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 SIT1Q9Y3P8 196 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 RASGRF2O14827 1237 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 CD3EAPO15446 510 aaKnown RBP8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 CLDN7O95471 211 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 SHBGP04278 402 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 ERFP50548 548 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 CLCN5P51795 746 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 ZNF284Q2VY69 593 aa8.36□□□□□ -1.07
PTPDC1-201ENST00000288976 KBTBD12Q3ZCT8 623 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms