RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 ATP6V0D1P61421 351 aa13.3□□□□□ -0.28
SCAF4-201ENST00000286835 RPL38P63173 70 aaKnown RBP13.3□□□□□ -0.28
SCAF4-201ENST00000286835 KCNA10Q16322 511 aa13.3□□□□□ -0.28
SCAF4-201ENST00000286835 PLA2G4EQ3MJ16 856 aa13.3□□□□□ -0.28
SCAF4-201ENST00000286835 KCTD11Q693B1 232 aa13.3□□□□□ -0.28
SCAF4-201ENST00000286835 KIAA0408Q6ZU52 694 aa13.3□□□□□ -0.28
SCAF4-201ENST00000286835 GPSM1Q86YR5 675 aa13.3□□□□□ -0.28
SCAF4-201ENST00000286835 OR10A6Q8NH74 314 aa13.3□□□□□ -0.28
SCAF4-201ENST00000286835 TMEM169Q96HH4 297 aa13.3□□□□□ -0.28
SCAF4-201ENST00000286835 MRGPRX2Q96LB1 330 aa13.3□□□□□ -0.28
SCAF4-201ENST00000286835 ROGDIQ9GZN7 287 aa13.3□□□□□ -0.28
SCAF4-201ENST00000286835 ADGRE2Q9UHX3 823 aa13.3□□□□□ -0.28
SCAF4-201ENST00000286835 EIF2B4Q9UI10 523 aaKnown RBP13.3□□□□□ -0.28
SCAF4-201ENST00000286835 ZNF12P17014 697 aa13.3□□□□□ -0.28
SCAF4-201ENST00000286835 AIF1P55008 147 aa13.3□□□□□ -0.28
SCAF4-201ENST00000286835 TBX4P57082 545 aa13.3□□□□□ -0.28
SCAF4-201ENST00000286835 MRPS6P82932 125 aaKnown RBP13.3□□□□□ -0.28
SCAF4-201ENST00000286835 RELAQ04206 551 aa13.3□□□□□ -0.28
SCAF4-201ENST00000286835 DDR2Q16832 855 aa13.3□□□□□ -0.28
SCAF4-201ENST00000286835 TTC23Q5W5X9 447 aa13.3□□□□□ -0.28
SCAF4-201ENST00000286835 TICAM1Q8IUC6 712 aa13.3□□□□□ -0.28
SCAF4-201ENST00000286835 CFAP52Q8N1V2 620 aa13.3□□□□□ -0.28
SCAF4-201ENST00000286835 LPCAT1Q8NF37 534 aa13.3□□□□□ -0.28
SCAF4-201ENST00000286835 OR56A4Q8NGH8 313 aa13.3□□□□□ -0.28
SCAF4-201ENST00000286835 PPP1R2P1Q96PQ5 205 aa13.3□□□□□ -0.28
SCAF4-201ENST00000286835 C16orf70Q9BSU1 422 aa13.3□□□□□ -0.28
SCAF4-201ENST00000286835 MUC3BQ9H195 1237 aa13.3□□□□□ -0.28
SCAF4-201ENST00000286835 GSTO2Q9H4Y5 243 aa13.3□□□□□ -0.28
SCAF4-201ENST00000286835 POLE4Q9NR33 117 aa13.3□□□□□ -0.28
SCAF4-201ENST00000286835 DUS2Q9NX74 493 aaKnown RBP13.3□□□□□ -0.28
SCAF4-201ENST00000286835 SLC12A8A0AV02 714 aa13.29□□□□□ -0.28
SCAF4-201ENST00000286835 I6L893 689 aaPredicted RBP13.29□□□□□ -0.28
SCAF4-201ENST00000286835 CDC7O00311 574 aa13.29□□□□□ -0.28
SCAF4-201ENST00000286835 SOCS7O14512 581 aa13.29□□□□□ -0.28
SCAF4-201ENST00000286835 UBFD1O14562 309 aaKnown RBP13.29□□□□□ -0.28
SCAF4-201ENST00000286835 TRIM24O15164 1050 aa13.29□□□□□ -0.28
SCAF4-201ENST00000286835 STX7O15400 261 aaKnown RBP13.29□□□□□ -0.28
SCAF4-201ENST00000286835 CA12O43570 354 aa13.29□□□□□ -0.28
SCAF4-201ENST00000286835 CNPP09543 421 aaKnown RBP13.29□□□□□ -0.28
SCAF4-201ENST00000286835 ALDH3B2P48448 385 aa13.29□□□□□ -0.28
SCAF4-201ENST00000286835 CLCN2P51788 898 aa13.29□□□□□ -0.28
SCAF4-201ENST00000286835 DNAJB13P59910 316 aa13.29□□□□□ -0.28
SCAF4-201ENST00000286835 NFATC3Q12968 1075 aa13.29□□□□□ -0.28
SCAF4-201ENST00000286835 NCCRP1Q6ZVX7 275 aaPredicted RBP13.29□□□□□ -0.28
SCAF4-201ENST00000286835 C14orf80Q86SX3 495 aa13.29□□□□□ -0.28
SCAF4-201ENST00000286835 CILP2Q8IUL8 1156 aa13.29□□□□□ -0.28
SCAF4-201ENST00000286835 DCP1BQ8IZD4 617 aaKnown RBP13.29□□□□□ -0.28
SCAF4-201ENST00000286835 RASSF1Q9NS23 344 aa13.29□□□□□ -0.28
SCAF4-201ENST00000286835 ZNHIT2Q9UHR6 403 aa13.29□□□□□ -0.28
SCAF4-201ENST00000286835 INVSQ9Y283 1065 aa13.29□□□□□ -0.28
SCAF4-201ENST00000286835 CCDC162PA2VCL2 907 aa13.29□□□□□ -0.28
SCAF4-201ENST00000286835 FYNP06241 537 aa13.29□□□□□ -0.28
SCAF4-201ENST00000286835 ANXA6P08133 673 aa13.29□□□□□ -0.28
SCAF4-201ENST00000286835 WARSP23381 471 aaKnown RBP13.29□□□□□ -0.28
SCAF4-201ENST00000286835 MYF6P23409 242 aa13.29□□□□□ -0.28
SCAF4-201ENST00000286835 AKT1P31749 480 aa13.29□□□□□ -0.28
SCAF4-201ENST00000286835 CCT8P50990 548 aa13.29□□□□□ -0.28
SCAF4-201ENST00000286835 AFF1P51825 1210 aaKnown RBP13.29□□□□□ -0.28
SCAF4-201ENST00000286835 LCP2Q13094 533 aa13.29□□□□□ -0.28
SCAF4-201ENST00000286835 LDLRAD1Q5T700 205 aa13.29□□□□□ -0.28
SCAF4-201ENST00000286835 PTRHD1Q6GMV3 140 aaKnown RBP13.29□□□□□ -0.28
SCAF4-201ENST00000286835 GLT6D1Q7Z4J2 308 aa13.29□□□□□ -0.28
SCAF4-201ENST00000286835 FUNDC1Q8IVP5 155 aa13.29□□□□□ -0.28
SCAF4-201ENST00000286835 CCDC103Q8IW40 242 aa13.29□□□□□ -0.28
SCAF4-201ENST00000286835 HS3ST5Q8IZT8 346 aa13.29□□□□□ -0.28
SCAF4-201ENST00000286835 OR4L1Q8NH43 312 aa13.29□□□□□ -0.28
SCAF4-201ENST00000286835 PTERQ96BW5 349 aa13.29□□□□□ -0.28
SCAF4-201ENST00000286835 MAGED4Q96JG8 741 aa13.29□□□□□ -0.28
SCAF4-201ENST00000286835 PAAF1Q9BRP4 392 aa13.29□□□□□ -0.28
SCAF4-201ENST00000286835 FEM1AQ9BSK4 669 aa13.29□□□□□ -0.28
SCAF4-201ENST00000286835 SCN3BQ9NY72 215 aa13.29□□□□□ -0.28
SCAF4-201ENST00000286835 FGF10O15520 208 aaPredicted RBP13.29□□□□□ -0.28
SCAF4-201ENST00000286835 SERPINF2P08697 491 aa13.29□□□□□ -0.28
SCAF4-201ENST00000286835 GJA5P36382 358 aa13.29□□□□□ -0.28
SCAF4-201ENST00000286835 EMP3P54852 163 aa13.29□□□□□ -0.28
SCAF4-201ENST00000286835 OR4D2P58180 307 aa13.29□□□□□ -0.28
SCAF4-201ENST00000286835 SLC39A12Q504Y0 691 aa13.29□□□□□ -0.28
SCAF4-201ENST00000286835 PAGE3Q5JUK9 113 aa13.29□□□□□ -0.28
SCAF4-201ENST00000286835 OTUD1Q5VV17 481 aaPredicted RBP13.29□□□□□ -0.28
SCAF4-201ENST00000286835 GPRIN3Q6ZVF9 776 aa13.29□□□□□ -0.28
SCAF4-201ENST00000286835 EID3Q8N140 333 aa13.29□□□□□ -0.28
SCAF4-201ENST00000286835 OR2T12Q8NG77 320 aa13.29□□□□□ -0.28
SCAF4-201ENST00000286835 FAM120BQ96EK7 910 aaKnown RBP13.29□□□□□ -0.28
SCAF4-201ENST00000286835 SLC2A13Q96QE2 648 aa13.29□□□□□ -0.28
SCAF4-201ENST00000286835 C11orf84Q9BUA3 381 aaPredicted RBP13.29□□□□□ -0.28
SCAF4-201ENST00000286835 CD320Q9NPF0 282 aa13.29□□□□□ -0.28
SCAF4-201ENST00000286835 ZNF510Q9Y2H8 683 aa13.29□□□□□ -0.28
SCAF4-201ENST00000286835 VEPH1Q14D04 833 aa13.28□□□□□ -0.28
SCAF4-201ENST00000286835 CTXN3Q4LDR2 81 aa13.28□□□□□ -0.28
SCAF4-201ENST00000286835 ISCA2Q86U28 154 aa13.28□□□□□ -0.28
SCAF4-201ENST00000286835 ATG16L2Q8NAA4 619 aa13.28□□□□□ -0.28
SCAF4-201ENST00000286835 OR4K2Q8NGD2 314 aa13.28□□□□□ -0.28
SCAF4-201ENST00000286835 FEM1CQ96JP0 617 aa13.28□□□□□ -0.28
SCAF4-201ENST00000286835 ASB2Q96Q27 587 aa13.28□□□□□ -0.28
SCAF4-201ENST00000286835 DPY30Q9C005 99 aa13.28□□□□□ -0.28
SCAF4-201ENST00000286835 ABCC13Q9NSE7 274 aa13.28□□□□□ -0.28
SCAF4-201ENST00000286835 GDAP2Q9NXN4 497 aa13.28□□□□□ -0.28
SCAF4-201ENST00000286835 CDH9Q9ULB4 789 aa13.28□□□□□ -0.28
SCAF4-201ENST00000286835 PDE10AQ9Y233 779 aa13.28□□□□□ -0.28
SCAF4-201ENST00000286835 UBR3Q6ZT12 1888 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms