RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 PYGBP11216 843 aa18.73■□□□□ 0.59
PDLIM3-202ENST00000284770 RPS3P23396 243 aaKnown RBP eCLIP18.73■□□□□ 0.59
PDLIM3-202ENST00000284770 MAT2AP31153 395 aaKnown RBP18.73■□□□□ 0.59
PDLIM3-202ENST00000284770 FMO4P31512 558 aa18.73■□□□□ 0.59
PDLIM3-202ENST00000284770 NSG1P42857 185 aa18.73■□□□□ 0.59
PDLIM3-202ENST00000284770 PXNP49023 591 aaPredicted RBP18.73■□□□□ 0.59
PDLIM3-202ENST00000284770 POU4F1Q01851 419 aa18.73■□□□□ 0.59
PDLIM3-202ENST00000284770 USP10Q14694 798 aaKnown RBP18.73■□□□□ 0.59
PDLIM3-202ENST00000284770 HECTD2Q5U5R9 776 aa18.73■□□□□ 0.59
PDLIM3-202ENST00000284770 PNCKQ6P2M8 343 aa18.73■□□□□ 0.59
PDLIM3-202ENST00000284770 TP53I13Q8NBR0 393 aaPredicted RBP18.73■□□□□ 0.59
PDLIM3-202ENST00000284770 DDHD1Q8NEL9 900 aa18.73■□□□□ 0.59
PDLIM3-202ENST00000284770 CENPTQ96BT3 561 aa18.73■□□□□ 0.59
PDLIM3-202ENST00000284770 ELMO2Q96JJ3 720 aa18.73■□□□□ 0.59
PDLIM3-202ENST00000284770 NDNQ99608 321 aa18.73■□□□□ 0.59
PDLIM3-202ENST00000284770 CAPS2Q9BXY5 557 aa18.73■□□□□ 0.59
PDLIM3-202ENST00000284770 CCDC68Q9H2F9 335 aa18.73■□□□□ 0.59
PDLIM3-202ENST00000284770 CNOT6Q9ULM6 557 aaKnown RBP18.73■□□□□ 0.59
PDLIM3-202ENST00000284770 VWA7Q9Y334 891 aa18.73■□□□□ 0.59
PDLIM3-202ENST00000284770 COMMD10Q9Y6G5 202 aa18.73■□□□□ 0.59
PDLIM3-202ENST00000284770 TRPM6Q9BX84 2022 aa18.72■□□□□ 0.59
PDLIM3-202ENST00000284770 TMEM221A6NGB7 291 aa18.72■□□□□ 0.59
PDLIM3-202ENST00000284770 M0R296 226 aa18.72■□□□□ 0.59
PDLIM3-202ENST00000284770 TPP1O14773 563 aa18.72■□□□□ 0.59
PDLIM3-202ENST00000284770 SLC25A14O95258 325 aaPredicted RBP18.72■□□□□ 0.59
PDLIM3-202ENST00000284770 ESR1P03372 595 aa18.72■□□□□ 0.59
PDLIM3-202ENST00000284770 TYK2P29597 1187 aa18.72■□□□□ 0.59
PDLIM3-202ENST00000284770 MAGEA12P43365 314 aa18.72■□□□□ 0.59
PDLIM3-202ENST00000284770 SERPINB8P50452 374 aa18.72■□□□□ 0.59
PDLIM3-202ENST00000284770 LDLRAP1Q5SW96 308 aa18.72■□□□□ 0.59
PDLIM3-202ENST00000284770 FAM45BPQ6NSW5 357 aa18.72■□□□□ 0.59
PDLIM3-202ENST00000284770 SLC41A1Q8IVJ1 513 aa18.72■□□□□ 0.59
PDLIM3-202ENST00000284770 PLA2G15Q8NCC3 412 aa18.72■□□□□ 0.59
PDLIM3-202ENST00000284770 GDAP1Q8TB36 358 aa18.72■□□□□ 0.59
PDLIM3-202ENST00000284770 FAM45AQ8TCE6 357 aa18.72■□□□□ 0.59
PDLIM3-202ENST00000284770 DENND1AQ8TEH3 1009 aa18.72■□□□□ 0.59
PDLIM3-202ENST00000284770 RLN3Q8WXF3 142 aa18.72■□□□□ 0.59
PDLIM3-202ENST00000284770 CCDC97Q96F63 343 aaPredicted RBP18.72■□□□□ 0.59
PDLIM3-202ENST00000284770 AARSD1Q9BTE6 412 aaKnown RBP18.72■□□□□ 0.59
PDLIM3-202ENST00000284770 CLPBQ9H078 707 aa18.72■□□□□ 0.59
PDLIM3-202ENST00000284770 CAB39LQ9H9S4 337 aa18.72■□□□□ 0.59
PDLIM3-202ENST00000284770 MBNL1Q9NR56 388 aaKnown RBP18.72■□□□□ 0.59
PDLIM3-202ENST00000284770 PCDHB1Q9Y5F3 818 aa18.72■□□□□ 0.59
PDLIM3-202ENST00000284770 NUMA1Q14980 2115 aa18.72■□□□□ 0.59
PDLIM3-202ENST00000284770 IGHV1OR15-9A0A0B4J2B8 117 aa18.71■□□□□ 0.59
PDLIM3-202ENST00000284770 PCCBP05166 539 aa18.71■□□□□ 0.59
PDLIM3-202ENST00000284770 PKMP14618 531 aaKnown RBP18.71■□□□□ 0.59
PDLIM3-202ENST00000284770 SAT1P21673 171 aa18.71■□□□□ 0.59
PDLIM3-202ENST00000284770 RPA3P35244 121 aaPredicted RBP18.71■□□□□ 0.59
PDLIM3-202ENST00000284770 B4GALNT1Q00973 533 aa18.71■□□□□ 0.59
PDLIM3-202ENST00000284770 IRF4Q15306 451 aa18.71■□□□□ 0.59
PDLIM3-202ENST00000284770 TTC19Q6DKK2 380 aaPredicted RBP18.71■□□□□ 0.59
PDLIM3-202ENST00000284770 ADAMTSL4Q6UY14 1074 aa18.71■□□□□ 0.59
PDLIM3-202ENST00000284770 CMC1Q7Z7K0 106 aa18.71■□□□□ 0.59
PDLIM3-202ENST00000284770 PHYKPLQ8IUZ5 450 aa18.71■□□□□ 0.59
PDLIM3-202ENST00000284770 ACMSDQ8TDX5 336 aa18.71■□□□□ 0.59
PDLIM3-202ENST00000284770 HEXDCQ8WVB3 486 aa18.71■□□□□ 0.59
PDLIM3-202ENST00000284770 APOPT1Q96IL0 206 aa18.71■□□□□ 0.59
PDLIM3-202ENST00000284770 SNX15Q9NRS6 342 aa18.71■□□□□ 0.59
PDLIM3-202ENST00000284770 SPATA6Q9NWH7 488 aaPredicted RBP18.71■□□□□ 0.59
PDLIM3-202ENST00000284770 MKS1Q9NXB0 559 aa18.71■□□□□ 0.59
PDLIM3-202ENST00000284770 INPP4BO15327 924 aa18.7■□□□□ 0.58
PDLIM3-202ENST00000284770 SLC31A1O15431 190 aa18.7■□□□□ 0.58
PDLIM3-202ENST00000284770 LATO43561 262 aa18.7■□□□□ 0.58
PDLIM3-202ENST00000284770 STMN1P16949 149 aa18.7■□□□□ 0.58
PDLIM3-202ENST00000284770 TEAD1P28347 426 aa18.7■□□□□ 0.58
PDLIM3-202ENST00000284770 CSRP3P50461 194 aa18.7■□□□□ 0.58
PDLIM3-202ENST00000284770 SLC12A2P55011 1212 aa18.7■□□□□ 0.58
PDLIM3-202ENST00000284770 TAS2R39P59534 338 aa18.7■□□□□ 0.58
PDLIM3-202ENST00000284770 ZKSCAN8Q15776 578 aaPredicted RBP18.7■□□□□ 0.58
PDLIM3-202ENST00000284770 CTSL3PQ5NE16 218 aa18.7■□□□□ 0.58
PDLIM3-202ENST00000284770 CEP97Q8IW35 865 aa18.7■□□□□ 0.58
PDLIM3-202ENST00000284770 CLDN19Q8N6F1 224 aa18.7■□□□□ 0.58
PDLIM3-202ENST00000284770 FRMD1Q8N878 549 aa18.7■□□□□ 0.58
PDLIM3-202ENST00000284770 DCUN1D1Q96GG9 259 aa18.7■□□□□ 0.58
PDLIM3-202ENST00000284770 LENG8Q96PV6 779 aaPredicted RBP18.7■□□□□ 0.58
PDLIM3-202ENST00000284770 OLFM1Q99784 485 aa18.7■□□□□ 0.58
PDLIM3-202ENST00000284770 C6orf106Q9H6K1 298 aaPredicted RBP18.7■□□□□ 0.58
PDLIM3-202ENST00000284770 INTS9Q9NV88 658 aaKnown RBP18.7■□□□□ 0.58
PDLIM3-202ENST00000284770 PSD3Q9NYI0 1048 aa18.7■□□□□ 0.58
PDLIM3-202ENST00000284770 TECTAO75443 2155 aa18.7■□□□□ 0.58
PDLIM3-202ENST00000284770 A6NNZ2 444 aa18.7■□□□□ 0.58
PDLIM3-202ENST00000284770 CFAP99D6REC4 459 aa18.7■□□□□ 0.58
PDLIM3-202ENST00000284770 RAD51BO15315 384 aa18.7■□□□□ 0.58
PDLIM3-202ENST00000284770 RALBP11234 206 aa18.7■□□□□ 0.58
PDLIM3-202ENST00000284770 FDXRP22570 491 aa18.7■□□□□ 0.58
PDLIM3-202ENST00000284770 AKT1P31749 480 aa18.7■□□□□ 0.58
PDLIM3-202ENST00000284770 TRIM23P36406 574 aa18.7■□□□□ 0.58
PDLIM3-202ENST00000284770 CCR5P51681 352 aa18.7■□□□□ 0.58
PDLIM3-202ENST00000284770 CDKN2DP55273 166 aa18.7■□□□□ 0.58
PDLIM3-202ENST00000284770 RAB10P61026 200 aa18.7■□□□□ 0.58
PDLIM3-202ENST00000284770 INPP5AQ14642 412 aa18.7■□□□□ 0.58
PDLIM3-202ENST00000284770 TUBB8Q3ZCM7 444 aa18.7■□□□□ 0.58
PDLIM3-202ENST00000284770 FAM160A2Q8N612 972 aaPredicted RBP18.7■□□□□ 0.58
PDLIM3-202ENST00000284770 ANKRD42Q8N9B4 389 aa18.7■□□□□ 0.58
PDLIM3-202ENST00000284770 TSPAN17Q96FV3 270 aa18.7■□□□□ 0.58
PDLIM3-202ENST00000284770 HIC2Q96JB3 615 aa18.7■□□□□ 0.58
PDLIM3-202ENST00000284770 GPR174Q9BXC1 333 aa18.7■□□□□ 0.58
PDLIM3-202ENST00000284770 GNPTGQ9UJJ9 305 aa18.7■□□□□ 0.58
PDLIM3-202ENST00000284770 MED16Q9Y2X0 877 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms