RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 GOT1P17174 413 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 DET1Q7L5Y6 550 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 OR8D1Q8WZ84 308 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 GPATCH1Q9BRR8 931 aaKnown RBP7.93□□□□□ -1.14
LIMD1-201ENST00000273317 GPN3Q9UHW5 284 aaPredicted RBP7.93□□□□□ -1.14
LIMD1-201ENST00000273317 LOXHD1Q8IVV2 1947 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 ABHD14A-ACY1A0A1B0GW23 586 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 KERAO60938 352 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 TCEA3O75764 348 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 LRATO95237 230 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 AMD1P17707 334 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 CARTPTQ16568 116 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 SLC34A3Q8N130 599 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 CYP2W1Q8TAV3 490 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 NEK7Q8TDX7 302 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 C1GALT1C1Q96EU7 318 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 C11orf24Q96F05 449 aaPredicted RBP7.93□□□□□ -1.14
LIMD1-201ENST00000273317 COPS8Q99627 209 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 TTYH1Q9H313 450 aaPredicted RBP7.93□□□□□ -1.14
LIMD1-201ENST00000273317 GRIP1Q9Y3R0 1128 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 MRPL42Q9Y6G3 142 aaKnown RBP7.93□□□□□ -1.14
LIMD1-201ENST00000273317 NFAT5O94916 1531 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 ELOVL7A1L3X0 281 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 PSMD10O75832 226 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 EN1Q05925 392 aaPredicted RBP7.93□□□□□ -1.14
LIMD1-201ENST00000273317 SNAPC1Q16533 368 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 SRFBP1Q8NEF9 429 aaKnown RBP7.93□□□□□ -1.14
LIMD1-201ENST00000273317 CDADC1Q9BWV3 514 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 IDI2Q9BXS1 227 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 ARL8BQ9NVJ2 186 aa7.93□□□□□ -1.14
LIMD1-201ENST00000273317 UBE2Q2LH0YL09 131 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 SLC22A1O15245 554 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 SH3BGRLO75368 114 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 MAFO75444 373 aaPredicted RBP7.92□□□□□ -1.14
LIMD1-201ENST00000273317 LYPLA1O75608 230 aaPredicted RBP7.92□□□□□ -1.14
LIMD1-201ENST00000273317 RPLP0P05388 317 aaKnown RBP7.92□□□□□ -1.14
LIMD1-201ENST00000273317 PPM1AP35813 382 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 ATN1P54259 1190 aaPredicted RBP7.92□□□□□ -1.14
LIMD1-201ENST00000273317 PRKAG1P54619 331 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 TUBA3CQ13748 450 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 KLHL22Q53GT1 634 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 FATE1Q969F0 183 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 NPAS2Q99743 824 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 RHBGQ9H310 441 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 GLOD4Q9HC38 313 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 MED11Q9P086 117 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 FBXL21Q9UKT6 434 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 HEBP2Q9Y5Z4 205 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 EML1O00423 815 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 TIE1P35590 1138 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 PPP3CAQ08209 521 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 FBXO43Q4G163 708 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 SNX20Q7Z614 316 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 RIOX2Q8IUF8 465 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 DENND1CQ8IV53 801 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 BTN2A3PQ96KV6 586 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 INPP4AQ96PE3 977 aaPredicted RBP7.92□□□□□ -1.14
LIMD1-201ENST00000273317 ANKRA2Q9H9E1 313 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 MARK1Q9P0L2 795 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 KMOO15229 486 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 CXCR3P49682 368 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 FAM189A2Q15884 450 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 DPY19L1Q2PZI1 675 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 ZNF311Q5JNZ3 666 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 FAAH2Q6GMR7 532 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 TMIEQ8NEW7 156 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 YTHDF1Q9BYJ9 559 aaKnown RBP7.92□□□□□ -1.14
LIMD1-201ENST00000273317 PDGFDQ9GZP0 370 aaPredicted RBP7.92□□□□□ -1.14
LIMD1-201ENST00000273317 MIOSQ9NXC5 875 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 AKAP8O43823 692 aaKnown RBP7.92□□□□□ -1.14
LIMD1-201ENST00000273317 CLDN11O75508 207 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 RPS9P46781 194 aaKnown RBP7.92□□□□□ -1.14
LIMD1-201ENST00000273317 PPP3R1P63098 170 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 CDK18Q07002 472 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 GK5Q6ZS86 529 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 AMIGO2Q86SJ2 522 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 LAPTM4BQ86VI4 370 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 PACRGLQ8N7B6 248 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 MKL1Q969V6 931 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 RNF31Q96EP0 1072 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 COMMD4Q9H0A8 199 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 PCDHGB1Q9Y5G3 927 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 OAS3Q9Y6K5 1087 aaKnown RBP7.92□□□□□ -1.14
LIMD1-201ENST00000273317 C5orf60A6NFR6 353 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 E7ENX8 843 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 AP2A2O94973 939 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 MC4RP32245 332 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 MARCKSL1P49006 195 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 PRAMEF18Q5VWM3 479 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 DCLRE1AQ6PJP8 1040 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 FAM151BQ6UXP7 276 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 FRMD7Q6ZUT3 714 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 FAM13CQ8NE31 585 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 OR52K2Q8NGK3 314 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 IRGQQ8WZA9 623 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 HTRA1Q92743 480 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 SPACA7Q96KW9 195 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 TMPRSS4Q9NRS4 437 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 ZNF490Q9ULM2 529 aaPredicted RBP7.92□□□□□ -1.14
LIMD1-201ENST00000273317 ANXA2P2A6NMY6 339 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms