RNA–Protein interactions for RNA: ENST00000273064.10

CNOT9-201, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT9, Length 4,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-201ENST00000273064 ADAMTS6Q9UKP5 1117 aa14.49□□□□□ -0.09
CNOT9-201ENST00000273064 POLR2AP24928 1970 aaKnown RBP14.49□□□□□ -0.09
CNOT9-201ENST00000273064 MBLAC1A4D2B0 266 aaPredicted RBP14.49□□□□□ -0.09
CNOT9-201ENST00000273064 MAP3K13O43283 966 aa14.49□□□□□ -0.09
CNOT9-201ENST00000273064 IL1BP01584 269 aa14.49□□□□□ -0.09
CNOT9-201ENST00000273064 CSKP41240 450 aa14.49□□□□□ -0.09
CNOT9-201ENST00000273064 CDKN2DP55273 166 aa14.49□□□□□ -0.09
CNOT9-201ENST00000273064 LCP2Q13094 533 aa14.49□□□□□ -0.09
CNOT9-201ENST00000273064 LIN52Q52LA3 116 aa14.49□□□□□ -0.09
CNOT9-201ENST00000273064 CRTC3Q6UUV7 619 aa14.49□□□□□ -0.09
CNOT9-201ENST00000273064 KIAA0408Q6ZU52 694 aa14.49□□□□□ -0.09
CNOT9-201ENST00000273064 CHST15Q7LFX5 561 aaPredicted RBP14.49□□□□□ -0.09
CNOT9-201ENST00000273064 ANKRD27Q96NW4 1050 aa14.49□□□□□ -0.09
CNOT9-201ENST00000273064 WRAP53Q9BUR4 548 aaKnown RBP14.49□□□□□ -0.09
CNOT9-201ENST00000273064 MAF1Q9H063 256 aa14.49□□□□□ -0.09
CNOT9-201ENST00000273064 ZNF490Q9ULM2 529 aaPredicted RBP14.49□□□□□ -0.09
CNOT9-201ENST00000273064 LAMB2P55268 1798 aa14.49□□□□□ -0.09
CNOT9-201ENST00000273064 ECI2O75521 394 aa14.48□□□□□ -0.09
CNOT9-201ENST00000273064 CLDN7O95471 211 aa14.48□□□□□ -0.09
CNOT9-201ENST00000273064 OR56A5P0C7T3 313 aa14.48□□□□□ -0.09
CNOT9-201ENST00000273064 IDH2P48735 452 aaKnown RBP14.48□□□□□ -0.09
CNOT9-201ENST00000273064 GLYATQ6IB77 296 aa14.48□□□□□ -0.09
CNOT9-201ENST00000273064 RRM2BQ7LG56 351 aa14.48□□□□□ -0.09
CNOT9-201ENST00000273064 ITIH5Q86UX2 942 aa14.48□□□□□ -0.09
CNOT9-201ENST00000273064 YAF2Q8IY57 180 aa14.48□□□□□ -0.09
CNOT9-201ENST00000273064 LEF1Q9UJU2 399 aaPredicted RBP14.48□□□□□ -0.09
CNOT9-201ENST00000273064 FFAR2O15552 330 aa14.48□□□□□ -0.09
CNOT9-201ENST00000273064 RGS14O43566 566 aa14.48□□□□□ -0.09
CNOT9-201ENST00000273064 COX7A2P14406 83 aa14.48□□□□□ -0.09
CNOT9-201ENST00000273064 NDST2P52849 883 aa14.48□□□□□ -0.09
CNOT9-201ENST00000273064 SIM2Q14190 667 aaPredicted RBP14.48□□□□□ -0.09
CNOT9-201ENST00000273064 GRB7Q14451 532 aa14.48□□□□□ -0.09
CNOT9-201ENST00000273064 TNFAIP8L3Q5GJ75 292 aa14.48□□□□□ -0.09
CNOT9-201ENST00000273064 ZCCHC8Q6NZY4 707 aaKnown RBP14.48□□□□□ -0.09
CNOT9-201ENST00000273064 OR10A6Q8NH74 314 aa14.48□□□□□ -0.09
CNOT9-201ENST00000273064 ACTRT2Q8TDY3 377 aa14.48□□□□□ -0.09
CNOT9-201ENST00000273064 MTERF1Q99551 399 aaKnown RBP14.48□□□□□ -0.09
CNOT9-201ENST00000273064 MRGBPQ9NV56 204 aa14.48□□□□□ -0.09
CNOT9-201ENST00000273064 C6orf203Q9P0P8 240 aaPredicted RBP14.48□□□□□ -0.09
CNOT9-201ENST00000273064 ZNF229Q9UJW7 825 aa14.48□□□□□ -0.09
CNOT9-201ENST00000273064 SCN1AP35498 2009 aa14.48□□□□□ -0.09
CNOT9-201ENST00000273064 HMX2A2RU54 273 aa14.48□□□□□ -0.09
CNOT9-201ENST00000273064 TMEM88BA6NKF7 163 aa14.48□□□□□ -0.09
CNOT9-201ENST00000273064 MLYCDO95822 493 aa14.48□□□□□ -0.09
CNOT9-201ENST00000273064 GPC1P35052 558 aa14.48□□□□□ -0.09
CNOT9-201ENST00000273064 PRKAG1P54619 331 aa14.48□□□□□ -0.09
CNOT9-201ENST00000273064 ARHGAP15Q53QZ3 475 aa14.48□□□□□ -0.09
CNOT9-201ENST00000273064 CYP4V2Q6ZWL3 525 aaPredicted RBP14.48□□□□□ -0.09
CNOT9-201ENST00000273064 KBTBD2Q8IY47 623 aa14.48□□□□□ -0.09
CNOT9-201ENST00000273064 CEP19Q96LK0 163 aa14.48□□□□□ -0.09
CNOT9-201ENST00000273064 NSUN3Q9H649 340 aaKnown RBP14.48□□□□□ -0.09
CNOT9-201ENST00000273064 ABCB8Q9NUT2 735 aa14.48□□□□□ -0.09
CNOT9-201ENST00000273064 RPL26L1Q9UNX3 145 aaKnown RBP14.48□□□□□ -0.09
CNOT9-201ENST00000273064 PDZK1P1A8MUH7 402 aa14.47□□□□□ -0.09
CNOT9-201ENST00000273064 ATP5BP06576 529 aaKnown RBP14.47□□□□□ -0.09
CNOT9-201ENST00000273064 DHRS4L1P0CG22 281 aa14.47□□□□□ -0.09
CNOT9-201ENST00000273064 CEACAM7Q14002 265 aa14.47□□□□□ -0.09
CNOT9-201ENST00000273064 TIFABQ6ZNK6 161 aa14.47□□□□□ -0.09
CNOT9-201ENST00000273064 ADAMTSL2Q86TH1 951 aa14.47□□□□□ -0.09
CNOT9-201ENST00000273064 ADCK1Q86TW2 530 aa14.47□□□□□ -0.09
CNOT9-201ENST00000273064 MYLIPQ8WY64 445 aa14.47□□□□□ -0.09
CNOT9-201ENST00000273064 GLMNQ92990 594 aa14.47□□□□□ -0.09
CNOT9-201ENST00000273064 IMPAD1Q9NX62 359 aa14.47□□□□□ -0.09
CNOT9-201ENST00000273064 GLYATL1P3A0A0U1RQE8 302 aa14.47□□□□□ -0.09
CNOT9-201ENST00000273064 TBC1D3BA6NDS4 549 aa14.47□□□□□ -0.09
CNOT9-201ENST00000273064 CHI3L1P36222 383 aaPredicted RBP14.47□□□□□ -0.09
CNOT9-201ENST00000273064 HCAR3P49019 387 aa14.47□□□□□ -0.09
CNOT9-201ENST00000273064 POLR2JP52435 117 aaKnown RBP14.47□□□□□ -0.09
CNOT9-201ENST00000273064 SNRPD1P62314 119 aaKnown RBP14.47□□□□□ -0.09
CNOT9-201ENST00000273064 PLA2G4EQ3MJ16 856 aa14.47□□□□□ -0.09
CNOT9-201ENST00000273064 FAM174BQ3ZCQ3 159 aa14.47□□□□□ -0.09
CNOT9-201ENST00000273064 XKR6Q5GH73 641 aa14.47□□□□□ -0.09
CNOT9-201ENST00000273064 FBXL19Q6PCT2 694 aa14.47□□□□□ -0.09
CNOT9-201ENST00000273064 UBE2R2Q712K3 238 aaPredicted RBP14.47□□□□□ -0.09
CNOT9-201ENST00000273064 DLG3Q92796 817 aa14.47□□□□□ -0.09
CNOT9-201ENST00000273064 UNC93B1Q9H1C4 597 aa14.47□□□□□ -0.09
CNOT9-201ENST00000273064 SPG21Q9NZD8 308 aa14.47□□□□□ -0.09
CNOT9-201ENST00000273064 TRPC4Q9UBN4 977 aa14.47□□□□□ -0.09
CNOT9-201ENST00000273064 VPS4AQ9UN37 437 aa14.47□□□□□ -0.09
CNOT9-201ENST00000273064 C2orf78A6NCI8 922 aa14.47□□□□□ -0.09
CNOT9-201ENST00000273064 STK25O00506 426 aa14.47□□□□□ -0.09
CNOT9-201ENST00000273064 RPL5P46777 297 aaKnown RBP14.47□□□□□ -0.09
CNOT9-201ENST00000273064 ATP6V0D1P61421 351 aa14.47□□□□□ -0.09
CNOT9-201ENST00000273064 UFM1P61960 85 aa14.47□□□□□ -0.09
CNOT9-201ENST00000273064 CYP4F2P78329 520 aa14.47□□□□□ -0.09
CNOT9-201ENST00000273064 LAPTM4AQ15012 233 aa14.47□□□□□ -0.09
CNOT9-201ENST00000273064 PABPC1LQ4VXU2 614 aaKnown RBP14.47□□□□□ -0.09
CNOT9-201ENST00000273064 LDLRAP1Q5SW96 308 aa14.47□□□□□ -0.09
CNOT9-201ENST00000273064 CST9Q5W186 159 aa14.47□□□□□ -0.09
CNOT9-201ENST00000273064 USP45Q70EL2 814 aa14.47□□□□□ -0.09
CNOT9-201ENST00000273064 HJURPQ8NCD3 748 aaPredicted RBP14.47□□□□□ -0.09
CNOT9-201ENST00000273064 TMEM174Q8WUU8 243 aa14.47□□□□□ -0.09
CNOT9-201ENST00000273064 NRG4Q8WWG1 115 aa14.47□□□□□ -0.09
CNOT9-201ENST00000273064 CDK5RAP1Q96SZ6 601 aaKnown RBP14.47□□□□□ -0.09
CNOT9-201ENST00000273064 PADI4Q9UM07 663 aa14.47□□□□□ -0.09
CNOT9-201ENST00000273064 C16orf96A6NNT2 1141 aa14.46□□□□□ -0.09
CNOT9-201ENST00000273064 CST1P01037 141 aa14.46□□□□□ -0.09
CNOT9-201ENST00000273064 IDO1P14902 403 aa14.46□□□□□ -0.09
CNOT9-201ENST00000273064 ADSLP30566 484 aaPredicted RBP14.46□□□□□ -0.09
CNOT9-201ENST00000273064 RPIAP49247 311 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms