RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 CHRM3P20309 590 aa16.21■□□□□ 0.18
TPM1-201ENST00000267996 KCNA5P22460 613 aa16.21■□□□□ 0.18
TPM1-201ENST00000267996 NSG1P42857 185 aa16.21■□□□□ 0.18
TPM1-201ENST00000267996 NAGLUP54802 743 aa16.21■□□□□ 0.18
TPM1-201ENST00000267996 NFKB2Q00653 900 aa16.21■□□□□ 0.18
TPM1-201ENST00000267996 OR4D1Q15615 310 aa16.21■□□□□ 0.18
TPM1-201ENST00000267996 AAK1Q2M2I8 961 aa16.21■□□□□ 0.18
TPM1-201ENST00000267996 HSF5Q4G112 596 aaPredicted RBP16.21■□□□□ 0.18
TPM1-201ENST00000267996 HENMT1Q5T8I9 393 aaKnown RBP16.21■□□□□ 0.18
TPM1-201ENST00000267996 PTRHD1Q6GMV3 140 aaKnown RBP16.21■□□□□ 0.18
TPM1-201ENST00000267996 NRSN1Q8IZ57 195 aa16.21■□□□□ 0.18
TPM1-201ENST00000267996 SIDT2Q8NBJ9 832 aaKnown RBP16.21■□□□□ 0.18
TPM1-201ENST00000267996 PIWIL2Q8TC59 973 aaKnown RBP16.21■□□□□ 0.18
TPM1-201ENST00000267996 PPP4R1Q8TF05 950 aa16.21■□□□□ 0.18
TPM1-201ENST00000267996 EZH1Q92800 747 aaPredicted RBP16.21■□□□□ 0.18
TPM1-201ENST00000267996 SGF29Q96ES7 293 aa16.21■□□□□ 0.18
TPM1-201ENST00000267996 PPP1R16AQ96I34 528 aa16.21■□□□□ 0.18
TPM1-201ENST00000267996 ATOH8Q96SQ7 321 aa16.21■□□□□ 0.18
TPM1-201ENST00000267996 COPS8Q99627 209 aa16.21■□□□□ 0.18
TPM1-201ENST00000267996 SIKE1Q9BRV8 207 aa16.21■□□□□ 0.18
TPM1-201ENST00000267996 LATS2Q9NRM7 1088 aa16.21■□□□□ 0.18
TPM1-201ENST00000267996 CKAP5Q14008 2032 aa16.2■□□□□ 0.18
TPM1-201ENST00000267996 NEMP2A6NFY4 417 aa16.2■□□□□ 0.18
TPM1-201ENST00000267996 IQCF5A8MTL0 148 aa16.2■□□□□ 0.18
TPM1-201ENST00000267996 E5RI56 91 aa16.2■□□□□ 0.18
TPM1-201ENST00000267996 C1QTNF3-AMACRE9PGA6 284 aa16.2■□□□□ 0.18
TPM1-201ENST00000267996 H3BQ06 376 aaPredicted RBP16.2■□□□□ 0.18
TPM1-201ENST00000267996 NPHS1O60500 1241 aa16.2■□□□□ 0.18
TPM1-201ENST00000267996 IPO13O94829 963 aaKnown RBP16.2■□□□□ 0.18
TPM1-201ENST00000267996 ALOX15P16050 662 aaPredicted RBP16.2■□□□□ 0.18
TPM1-201ENST00000267996 SERPINB5P36952 375 aa16.2■□□□□ 0.18
TPM1-201ENST00000267996 ETV3P41162 512 aa16.2■□□□□ 0.18
TPM1-201ENST00000267996 KIR2DL1P43626 348 aaPredicted RBP16.2■□□□□ 0.18
TPM1-201ENST00000267996 ARFIP2P53365 341 aa16.2■□□□□ 0.18
TPM1-201ENST00000267996 B4GALNT1Q00973 533 aa16.2■□□□□ 0.18
TPM1-201ENST00000267996 CCDC15Q0P6D6 951 aa16.2■□□□□ 0.18
TPM1-201ENST00000267996 ELP6Q0PNE2 266 aa16.2■□□□□ 0.18
TPM1-201ENST00000267996 CAMK2GQ13555 558 aaPredicted RBP16.2■□□□□ 0.18
TPM1-201ENST00000267996 RCN2Q14257 317 aa16.2■□□□□ 0.18
TPM1-201ENST00000267996 LACTB2Q53H82 288 aaPredicted RBP16.2■□□□□ 0.18
TPM1-201ENST00000267996 CCDC121Q6ZUS5 278 aa16.2■□□□□ 0.18
TPM1-201ENST00000267996 PIWIL4Q7Z3Z4 852 aaKnown RBP16.2■□□□□ 0.18
TPM1-201ENST00000267996 SLC22A9Q8IVM8 553 aa16.2■□□□□ 0.18
TPM1-201ENST00000267996 TRAM1L1Q8N609 369 aa16.2■□□□□ 0.18
TPM1-201ENST00000267996 INPP5DQ92835 1189 aa16.2■□□□□ 0.18
TPM1-201ENST00000267996 SCAMP4Q969E2 229 aa16.2■□□□□ 0.18
TPM1-201ENST00000267996 COQ10AQ96MF6 247 aa16.2■□□□□ 0.18
TPM1-201ENST00000267996 HDAC8Q9BY41 377 aa16.2■□□□□ 0.18
TPM1-201ENST00000267996 ZDHHC4Q9NPG8 344 aa16.2■□□□□ 0.18
TPM1-201ENST00000267996 KLHL42Q9P2K6 505 aa16.2■□□□□ 0.18
TPM1-201ENST00000267996 IKZF3Q9UKT9 509 aa16.2■□□□□ 0.18
TPM1-201ENST00000267996 COL4A2P08572 1712 aa16.19■□□□□ 0.18
TPM1-201ENST00000267996 F5P12259 2224 aa16.19■□□□□ 0.18
TPM1-201ENST00000267996 A0A0G2JND7 137 aa16.19■□□□□ 0.18
TPM1-201ENST00000267996 KERAO60938 352 aa16.19■□□□□ 0.18
TPM1-201ENST00000267996 ELFN1P0C7U0 828 aa16.19■□□□□ 0.18
TPM1-201ENST00000267996 ADRB3P13945 408 aa16.19■□□□□ 0.18
TPM1-201ENST00000267996 MTHFD2P13995 350 aa16.19■□□□□ 0.18
TPM1-201ENST00000267996 IL2P60568 153 aa16.19■□□□□ 0.18
TPM1-201ENST00000267996 CREB5Q02930 508 aa16.19■□□□□ 0.18
TPM1-201ENST00000267996 GALNTL6Q49A17 601 aa16.19■□□□□ 0.18
TPM1-201ENST00000267996 GLIPR1L2Q4G1C9 344 aa16.19■□□□□ 0.18
TPM1-201ENST00000267996 TMEM52BQ4KMG9 183 aa16.19■□□□□ 0.18
TPM1-201ENST00000267996 GPRC6AQ5T6X5 926 aa16.19■□□□□ 0.18
TPM1-201ENST00000267996 FBXL19Q6PCT2 694 aa16.19■□□□□ 0.18
TPM1-201ENST00000267996 TRIM67Q6ZTA4 783 aa16.19■□□□□ 0.18
TPM1-201ENST00000267996 ERN2Q76MJ5 926 aaKnown RBP16.19■□□□□ 0.18
TPM1-201ENST00000267996 CYP2U1Q7Z449 544 aa16.19■□□□□ 0.18
TPM1-201ENST00000267996 MMAAQ8IVH4 418 aaKnown RBP16.19■□□□□ 0.18
TPM1-201ENST00000267996 LSMEM2Q8N112 164 aa16.19■□□□□ 0.18
TPM1-201ENST00000267996 CLDN19Q8N6F1 224 aa16.19■□□□□ 0.18
TPM1-201ENST00000267996 FITM2Q8N6M3 262 aa16.19■□□□□ 0.18
TPM1-201ENST00000267996 STAG3L4Q8TBR4 150 aa16.19■□□□□ 0.18
TPM1-201ENST00000267996 LKAAEAR1Q8TD35 194 aa16.19■□□□□ 0.18
TPM1-201ENST00000267996 ZSCAN5AQ9BUG6 496 aa16.19■□□□□ 0.18
TPM1-201ENST00000267996 SPATA16Q9BXB7 569 aa16.19■□□□□ 0.18
TPM1-201ENST00000267996 TMEM120AQ9BXJ8 343 aa16.19■□□□□ 0.18
TPM1-201ENST00000267996 ABCG8Q9H221 673 aa16.19■□□□□ 0.18
TPM1-201ENST00000267996 CD84Q9UIB8 345 aa16.19■□□□□ 0.18
TPM1-201ENST00000267996 ITM2BQ9Y287 266 aa16.19■□□□□ 0.18
TPM1-201ENST00000267996 PIKFYVEQ9Y2I7 2098 aa16.18■□□□□ 0.18
TPM1-201ENST00000267996 C2CD4DB7Z1M9 353 aa16.18■□□□□ 0.18
TPM1-201ENST00000267996 SPECC1L-ADORA2AF8WAN1 911 aa16.18■□□□□ 0.18
TPM1-201ENST00000267996 DCTN3O75935 186 aa16.18■□□□□ 0.18
TPM1-201ENST00000267996 KIAA0754O94854 1291 aa16.18■□□□□ 0.18
TPM1-201ENST00000267996 SNUPNO95149 360 aaKnown RBP16.18■□□□□ 0.18
TPM1-201ENST00000267996 HSPA4LO95757 839 aa16.18■□□□□ 0.18
TPM1-201ENST00000267996 CTHP32929 405 aa16.18■□□□□ 0.18
TPM1-201ENST00000267996 LIG3P49916 1009 aa16.18■□□□□ 0.18
TPM1-201ENST00000267996 SMAD4Q13485 552 aaKnown RBP16.18■□□□□ 0.18
TPM1-201ENST00000267996 ARL13AQ5H913 290 aaPredicted RBP16.18■□□□□ 0.18
TPM1-201ENST00000267996 FAM46CQ5VWP2 391 aa16.18■□□□□ 0.18
TPM1-201ENST00000267996 TXNDC11Q6PKC3 985 aa16.18■□□□□ 0.18
TPM1-201ENST00000267996 CPNE9Q8IYJ1 553 aa16.18■□□□□ 0.18
TPM1-201ENST00000267996 ZNF513Q8N8E2 541 aaPredicted RBP16.18■□□□□ 0.18
TPM1-201ENST00000267996 EEF1AKMT1Q8WVE0 214 aa16.18■□□□□ 0.18
TPM1-201ENST00000267996 RAB7BQ96AH8 199 aa16.18■□□□□ 0.18
TPM1-201ENST00000267996 L3HYPDHQ96EM0 354 aa16.18■□□□□ 0.18
TPM1-201ENST00000267996 LINGO1Q96FE5 620 aa16.18■□□□□ 0.18
TPM1-201ENST00000267996 DTD2Q96FN9 168 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms