RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 TPBGLP0DKB5 382 aa11.45□□□□□ -0.58
SCAF11-201ENST00000266589 ITGB6P18564 788 aa11.45□□□□□ -0.58
SCAF11-201ENST00000266589 TARSP26639 723 aaKnown RBP11.45□□□□□ -0.58
SCAF11-201ENST00000266589 RPL14P50914 215 aaKnown RBP11.45□□□□□ -0.58
SCAF11-201ENST00000266589 NCALDP61601 193 aa11.45□□□□□ -0.58
SCAF11-201ENST00000266589 NFKB2Q00653 900 aa11.45□□□□□ -0.58
SCAF11-201ENST00000266589 RALGDSQ12967 914 aa11.45□□□□□ -0.58
SCAF11-201ENST00000266589 TSNQ15631 228 aaKnown RBP11.45□□□□□ -0.58
SCAF11-201ENST00000266589 VWA5B1Q5TIE3 1220 aa11.45□□□□□ -0.58
SCAF11-201ENST00000266589 STAG3L4Q8TBR4 150 aa11.45□□□□□ -0.58
SCAF11-201ENST00000266589 EEF1AKMT1Q8WVE0 214 aa11.45□□□□□ -0.58
SCAF11-201ENST00000266589 UCMAQ8WVF2 138 aa11.45□□□□□ -0.58
SCAF11-201ENST00000266589 OR8D1Q8WZ84 308 aa11.45□□□□□ -0.58
SCAF11-201ENST00000266589 CHFRQ96EP1 664 aa11.45□□□□□ -0.58
SCAF11-201ENST00000266589 CNDP1Q96KN2 507 aa11.45□□□□□ -0.58
SCAF11-201ENST00000266589 RNF112Q9ULX5 631 aa11.45□□□□□ -0.58
SCAF11-201ENST00000266589 CAPN7Q9Y6W3 813 aa11.45□□□□□ -0.58
SCAF11-201ENST00000266589 NPEPPSL1A6NEC2 478 aa11.45□□□□□ -0.58
SCAF11-201ENST00000266589 SUPT3HB4E1H0 165 aa11.45□□□□□ -0.58
SCAF11-201ENST00000266589 CDC7O00311 574 aa11.45□□□□□ -0.58
SCAF11-201ENST00000266589 SUPT3HO75486 399 aa11.45□□□□□ -0.58
SCAF11-201ENST00000266589 DNAJC8O75937 253 aaPredicted RBP11.45□□□□□ -0.58
SCAF11-201ENST00000266589 UNC5CO95185 931 aa11.45□□□□□ -0.58
SCAF11-201ENST00000266589 KAT7O95251 611 aa11.45□□□□□ -0.58
SCAF11-201ENST00000266589 CBX6O95503 412 aa11.45□□□□□ -0.58
SCAF11-201ENST00000266589 MTHFD2P13995 350 aa11.45□□□□□ -0.58
SCAF11-201ENST00000266589 IMPDH1P20839 514 aa11.45□□□□□ -0.58
SCAF11-201ENST00000266589 SERPINB5P36952 375 aa11.45□□□□□ -0.58
SCAF11-201ENST00000266589 MMP12P39900 470 aa11.45□□□□□ -0.58
SCAF11-201ENST00000266589 IDH3AP50213 366 aa11.45□□□□□ -0.58
SCAF11-201ENST00000266589 METAP1P53582 386 aa11.45□□□□□ -0.58
SCAF11-201ENST00000266589 ELAVL3Q14576 367 aaKnown RBP11.45□□□□□ -0.58
SCAF11-201ENST00000266589 CTC1Q2NKJ3 1217 aa11.45□□□□□ -0.58
SCAF11-201ENST00000266589 SPDYAQ5MJ70 313 aa11.45□□□□□ -0.58
SCAF11-201ENST00000266589 RPS27LQ71UM5 84 aaKnown RBP11.45□□□□□ -0.58
SCAF11-201ENST00000266589 DPPA4Q7L190 304 aa11.45□□□□□ -0.58
SCAF11-201ENST00000266589 PIP4K2CQ8TBX8 421 aa11.45□□□□□ -0.58
SCAF11-201ENST00000266589 LKAAEAR1Q8TD35 194 aa11.45□□□□□ -0.58
SCAF11-201ENST00000266589 COPS8Q99627 209 aa11.45□□□□□ -0.58
SCAF11-201ENST00000266589 RPP25Q9BUL9 199 aaKnown RBP11.45□□□□□ -0.58
SCAF11-201ENST00000266589 SPATA16Q9BXB7 569 aa11.45□□□□□ -0.58
SCAF11-201ENST00000266589 ABCG8Q9H221 673 aa11.45□□□□□ -0.58
SCAF11-201ENST00000266589 TMEM245Q9H330 911 aa11.45□□□□□ -0.58
SCAF11-201ENST00000266589 COG4Q9H9E3 785 aa11.45□□□□□ -0.58
SCAF11-201ENST00000266589 ZDHHC4Q9NPG8 344 aa11.45□□□□□ -0.58
SCAF11-201ENST00000266589 TXLNGQ9NUQ3 528 aa11.45□□□□□ -0.58
SCAF11-201ENST00000266589 ZDHHC3Q9NYG2 299 aa11.45□□□□□ -0.58
SCAF11-201ENST00000266589 ZDHHC2Q9UIJ5 367 aa11.45□□□□□ -0.58
SCAF11-201ENST00000266589 HAO1Q9UJM8 370 aa11.45□□□□□ -0.58
SCAF11-201ENST00000266589 DHRS7Q9Y394 339 aa11.45□□□□□ -0.58
SCAF11-201ENST00000266589 ANTXRLA6NF34 631 aa11.44□□□□□ -0.58
SCAF11-201ENST00000266589 MATN2O00339 956 aa11.44□□□□□ -0.58
SCAF11-201ENST00000266589 DIAPH2O60879 1101 aa11.44□□□□□ -0.58
SCAF11-201ENST00000266589 SLC25A14O95258 325 aaPredicted RBP11.44□□□□□ -0.58
SCAF11-201ENST00000266589 TRIM16O95361 564 aa11.44□□□□□ -0.58
SCAF11-201ENST00000266589 GFAPP14136 432 aa11.44□□□□□ -0.58
SCAF11-201ENST00000266589 HNRNPLP14866 589 aaKnown RBP eCLIP11.44□□□□□ -0.585e-7■■■□□ 16.2
SCAF11-201ENST00000266589 EIF2DP41214 584 aaKnown RBP11.44□□□□□ -0.58
SCAF11-201ENST00000266589 IL12RB1P42701 662 aa11.44□□□□□ -0.58
SCAF11-201ENST00000266589 NSG1P42857 185 aa11.44□□□□□ -0.58
SCAF11-201ENST00000266589 MTHFRP42898 656 aa11.44□□□□□ -0.58
SCAF11-201ENST00000266589 ALDH18A1P54886 795 aaKnown RBP11.44□□□□□ -0.58
SCAF11-201ENST00000266589 HERVK_113P63132 956 aa11.44□□□□□ -0.58
SCAF11-201ENST00000266589 TUBB3Q13509 450 aa11.44□□□□□ -0.58
SCAF11-201ENST00000266589 GRIN2CQ14957 1233 aa11.44□□□□□ -0.58
SCAF11-201ENST00000266589 PFKFB4Q16877 469 aa11.44□□□□□ -0.58
SCAF11-201ENST00000266589 ITPRIPL2Q3MIP1 535 aa11.44□□□□□ -0.58
SCAF11-201ENST00000266589 ZNF678Q5SXM1 525 aa11.44□□□□□ -0.58
SCAF11-201ENST00000266589 ERAP2Q6P179 960 aa11.44□□□□□ -0.58
SCAF11-201ENST00000266589 MACC1Q6ZN28 852 aa11.44□□□□□ -0.58
SCAF11-201ENST00000266589 FRMD7Q6ZUT3 714 aa11.44□□□□□ -0.58
SCAF11-201ENST00000266589 Q6ZVL8 140 aa11.44□□□□□ -0.58
SCAF11-201ENST00000266589 PTGR2Q8N8N7 351 aaPredicted RBP11.44□□□□□ -0.58
SCAF11-201ENST00000266589 TMIEQ8NEW7 156 aa11.44□□□□□ -0.58
SCAF11-201ENST00000266589 SUSD6Q92537 303 aa11.44□□□□□ -0.58
SCAF11-201ENST00000266589 ULK4Q96C45 1275 aa11.44□□□□□ -0.58
SCAF11-201ENST00000266589 L3HYPDHQ96EM0 354 aa11.44□□□□□ -0.58
SCAF11-201ENST00000266589 TRMT61BQ9BVS5 477 aaKnown RBP11.44□□□□□ -0.58
SCAF11-201ENST00000266589 ERVK-6Q9BXR3 956 aa11.44□□□□□ -0.58
SCAF11-201ENST00000266589 FAM83DQ9H4H8 585 aa11.44□□□□□ -0.58
SCAF11-201ENST00000266589 APOBEC2Q9Y235 224 aaKnown RBP11.44□□□□□ -0.58
SCAF11-201ENST00000266589 ITM2BQ9Y287 266 aa11.44□□□□□ -0.58
SCAF11-201ENST00000266589 TICRRQ7Z2Z1 1910 aa11.44□□□□□ -0.58
SCAF11-201ENST00000266589 SYCE1LA8MT33 242 aa11.44□□□□□ -0.58
SCAF11-201ENST00000266589 HDAC3O15379 428 aa11.44□□□□□ -0.58
SCAF11-201ENST00000266589 CCDC22O60826 627 aa11.44□□□□□ -0.58
SCAF11-201ENST00000266589 ECI2O75521 394 aa11.44□□□□□ -0.58
SCAF11-201ENST00000266589 SUPT7LO94864 414 aa11.44□□□□□ -0.58
SCAF11-201ENST00000266589 SNUPNO95149 360 aaKnown RBP11.44□□□□□ -0.58
SCAF11-201ENST00000266589 ITGB7P26010 798 aa11.44□□□□□ -0.58
SCAF11-201ENST00000266589 ETV3P41162 512 aa11.44□□□□□ -0.58
SCAF11-201ENST00000266589 HK2P52789 917 aa11.44□□□□□ -0.58
SCAF11-201ENST00000266589 DCDC1P59894 354 aa11.44□□□□□ -0.58
SCAF11-201ENST00000266589 SH2D4BQ5SQS7 431 aa11.44□□□□□ -0.58
SCAF11-201ENST00000266589 SEL1L3Q68CR1 1132 aa11.44□□□□□ -0.58
SCAF11-201ENST00000266589 EPGNQ6UW88 154 aa11.44□□□□□ -0.58
SCAF11-201ENST00000266589 RAB44Q7Z6P3 723 aaPredicted RBP11.44□□□□□ -0.58
SCAF11-201ENST00000266589 MAPK15Q8TD08 544 aa11.44□□□□□ -0.58
SCAF11-201ENST00000266589 INPP5DQ92835 1189 aa11.44□□□□□ -0.58
SCAF11-201ENST00000266589 SCAMP4Q969E2 229 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms