RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 TMEM130Q8N3G9 435 aa11.46□□□□□ -0.57
CLSTN3-201ENST00000266546 ANKLE1Q8NAG6 615 aa11.46□□□□□ -0.57
CLSTN3-201ENST00000266546 C8orf48Q96LL4 319 aa11.46□□□□□ -0.57
CLSTN3-201ENST00000266546 MIOSQ9NXC5 875 aa11.46□□□□□ -0.57
CLSTN3-201ENST00000266546 DOCK5Q9H7D0 1870 aa11.46□□□□□ -0.57
CLSTN3-201ENST00000266546 TOR1BO14657 336 aa11.46□□□□□ -0.57
CLSTN3-201ENST00000266546 ZNF197O14709 1029 aa11.46□□□□□ -0.57
CLSTN3-201ENST00000266546 LZTS3O60299 673 aaPredicted RBP11.46□□□□□ -0.57
CLSTN3-201ENST00000266546 SORBS2O94875 1100 aaKnown RBP11.46□□□□□ -0.57
CLSTN3-201ENST00000266546 CYBBP04839 570 aa11.46□□□□□ -0.57
CLSTN3-201ENST00000266546 F7P08709 466 aaPredicted RBP11.46□□□□□ -0.57
CLSTN3-201ENST00000266546 UMPSP11172 480 aa11.46□□□□□ -0.57
CLSTN3-201ENST00000266546 L1CAMP32004 1257 aa11.46□□□□□ -0.57
CLSTN3-201ENST00000266546 GLUD2P49448 558 aa11.46□□□□□ -0.57
CLSTN3-201ENST00000266546 TAS2R39P59534 338 aa11.46□□□□□ -0.57
CLSTN3-201ENST00000266546 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.46□□□□□ -0.57
CLSTN3-201ENST00000266546 MOGQ16653 247 aa11.46□□□□□ -0.57
CLSTN3-201ENST00000266546 ZC3H12BQ5HYM0 836 aaKnown RBP11.46□□□□□ -0.57
CLSTN3-201ENST00000266546 FIBCD1Q8N539 461 aa11.46□□□□□ -0.57
CLSTN3-201ENST00000266546 TOX2Q96NM4 488 aa11.46□□□□□ -0.57
CLSTN3-201ENST00000266546 HAPLN3Q96S86 360 aa11.46□□□□□ -0.57
CLSTN3-201ENST00000266546 SLC39A3Q9BRY0 314 aa11.46□□□□□ -0.57
CLSTN3-201ENST00000266546 EMILIN2Q9BXX0 1053 aa11.46□□□□□ -0.57
CLSTN3-201ENST00000266546 MUC13Q9H3R2 512 aa11.46□□□□□ -0.57
CLSTN3-201ENST00000266546 SLC28A3Q9HAS3 691 aa11.46□□□□□ -0.57
CLSTN3-201ENST00000266546 CRTAC1Q9NQ79 661 aa11.46□□□□□ -0.57
CLSTN3-201ENST00000266546 NEMP2A6NFY4 417 aa11.46□□□□□ -0.58
CLSTN3-201ENST00000266546 TMEM233B4DJY2 109 aa11.46□□□□□ -0.58
CLSTN3-201ENST00000266546 BUD23O43709 281 aaKnown RBP11.46□□□□□ -0.58
CLSTN3-201ENST00000266546 POU1F1P28069 291 aa11.46□□□□□ -0.58
CLSTN3-201ENST00000266546 IFNA8P32881 189 aa11.46□□□□□ -0.58
CLSTN3-201ENST00000266546 ATP5C1P36542 298 aaKnown RBP11.46□□□□□ -0.58
CLSTN3-201ENST00000266546 MAD2L1Q13257 205 aaPredicted RBP11.46□□□□□ -0.58
CLSTN3-201ENST00000266546 CEACAM7Q14002 265 aa11.46□□□□□ -0.58
CLSTN3-201ENST00000266546 MAPKAPK3Q16644 382 aa11.46□□□□□ -0.58
CLSTN3-201ENST00000266546 RFX4Q33E94 735 aa11.46□□□□□ -0.58
CLSTN3-201ENST00000266546 UGT2A3Q6UWM9 527 aa11.46□□□□□ -0.58
CLSTN3-201ENST00000266546 CCDC149Q6ZUS6 474 aa11.46□□□□□ -0.58
CLSTN3-201ENST00000266546 IFT80Q9P2H3 777 aaPredicted RBP11.46□□□□□ -0.58
CLSTN3-201ENST00000266546 TRPM7Q96QT4 1865 aa11.46□□□□□ -0.58
CLSTN3-201ENST00000266546 CENPXA8MT69 81 aa11.46□□□□□ -0.58
CLSTN3-201ENST00000266546 HNRNPDQ14103 355 aaKnown RBP11.46□□□□□ -0.58
CLSTN3-201ENST00000266546 AARS2Q5JTZ9 985 aaKnown RBP11.46□□□□□ -0.58
CLSTN3-201ENST00000266546 OGFOD2Q6N063 350 aa11.46□□□□□ -0.58
CLSTN3-201ENST00000266546 DENND6AQ8IWF6 608 aa11.46□□□□□ -0.58
CLSTN3-201ENST00000266546 HEXDCQ8WVB3 486 aa11.46□□□□□ -0.58
CLSTN3-201ENST00000266546 PPM1MQ96MI6 270 aa11.46□□□□□ -0.58
CLSTN3-201ENST00000266546 NODALQ96S42 347 aa11.46□□□□□ -0.58
CLSTN3-201ENST00000266546 SYNDIG1Q9H7V2 258 aa11.46□□□□□ -0.58
CLSTN3-201ENST00000266546 KLHL3Q9UH77 587 aa11.46□□□□□ -0.58
CLSTN3-201ENST00000266546 FZD10Q9ULW2 581 aa11.46□□□□□ -0.58
CLSTN3-201ENST00000266546 U3KQV3 271 aa11.46□□□□□ -0.58
CLSTN3-201ENST00000266546 SEC22BO75396 215 aa11.45□□□□□ -0.58
CLSTN3-201ENST00000266546 SERPINF2P08697 491 aa11.45□□□□□ -0.58
CLSTN3-201ENST00000266546 NCK1P16333 377 aa11.45□□□□□ -0.58
CLSTN3-201ENST00000266546 CTGFP29279 349 aa11.45□□□□□ -0.58
CLSTN3-201ENST00000266546 FMO4P31512 558 aa11.45□□□□□ -0.58
CLSTN3-201ENST00000266546 POLD2P49005 469 aa11.45□□□□□ -0.58
CLSTN3-201ENST00000266546 HCAR3P49019 387 aa11.45□□□□□ -0.58
CLSTN3-201ENST00000266546 PRKCQQ04759 706 aa11.45□□□□□ -0.58
CLSTN3-201ENST00000266546 ARHGAP15Q53QZ3 475 aa11.45□□□□□ -0.58
CLSTN3-201ENST00000266546 SDHAF4Q5VUM1 108 aa11.45□□□□□ -0.58
CLSTN3-201ENST00000266546 GCNT7Q6ZNI0 430 aa11.45□□□□□ -0.58
CLSTN3-201ENST00000266546 CDYL2Q8N8U2 506 aa11.45□□□□□ -0.58
CLSTN3-201ENST00000266546 OMA1Q96E52 524 aa11.45□□□□□ -0.58
CLSTN3-201ENST00000266546 MUC3BQ9H195 1237 aa11.45□□□□□ -0.58
CLSTN3-201ENST00000266546 USP29Q9HBJ7 922 aa11.45□□□□□ -0.58
CLSTN3-201ENST00000266546 EHD3Q9NZN3 535 aa11.45□□□□□ -0.58
CLSTN3-201ENST00000266546 CYTH4Q9UIA0 394 aa11.45□□□□□ -0.58
CLSTN3-201ENST00000266546 PDE10AQ9Y233 779 aa11.45□□□□□ -0.58
CLSTN3-201ENST00000266546 KNL1Q8NG31 2342 aa11.45□□□□□ -0.58
CLSTN3-201ENST00000266546 ZBTB14O43829 449 aa11.45□□□□□ -0.58
CLSTN3-201ENST00000266546 CDK4P11802 303 aa11.45□□□□□ -0.58
CLSTN3-201ENST00000266546 IL12RB1P42701 662 aa11.45□□□□□ -0.58
CLSTN3-201ENST00000266546 MTHFRP42898 656 aa11.45□□□□□ -0.58
CLSTN3-201ENST00000266546 CLCN2P51788 898 aa11.45□□□□□ -0.58
CLSTN3-201ENST00000266546 HECTD3Q5T447 861 aa11.45□□□□□ -0.58
CLSTN3-201ENST00000266546 SLC39A5Q6ZMH5 540 aa11.45□□□□□ -0.58
CLSTN3-201ENST00000266546 MILR1Q7Z6M3 343 aa11.45□□□□□ -0.58
CLSTN3-201ENST00000266546 RALGPS2Q86X27 583 aaPredicted RBP11.45□□□□□ -0.58
CLSTN3-201ENST00000266546 PEBP4Q96S96 227 aa11.45□□□□□ -0.58
CLSTN3-201ENST00000266546 NPY6RQ99463 290 aa11.45□□□□□ -0.58
CLSTN3-201ENST00000266546 SMOQ99835 787 aa11.45□□□□□ -0.58
CLSTN3-201ENST00000266546 DHRS4Q9BTZ2 278 aa11.45□□□□□ -0.58
CLSTN3-201ENST00000266546 CINPQ9BW66 212 aaPredicted RBP11.45□□□□□ -0.58
CLSTN3-201ENST00000266546 GBA3Q9H227 469 aa11.45□□□□□ -0.58
CLSTN3-201ENST00000266546 ARMC7Q9H6L4 198 aa11.45□□□□□ -0.58
CLSTN3-201ENST00000266546 ACTR8Q9H981 624 aa11.45□□□□□ -0.58
CLSTN3-201ENST00000266546 ZMYM5Q9UJ78 669 aa11.45□□□□□ -0.58
CLSTN3-201ENST00000266546 DNMT3LQ9UJW3 386 aa11.45□□□□□ -0.58
CLSTN3-201ENST00000266546 FBXW11Q9UKB1 542 aa11.45□□□□□ -0.58
CLSTN3-201ENST00000266546 PNMA8BQ9ULN7 279 aaPredicted RBP11.45□□□□□ -0.58
CLSTN3-201ENST00000266546 SH3BP1Q9Y3L3 701 aa11.45□□□□□ -0.58
CLSTN3-201ENST00000266546 H3BNH8 94 aa11.45□□□□□ -0.58
CLSTN3-201ENST00000266546 SERPINI2O75830 405 aa11.45□□□□□ -0.58
CLSTN3-201ENST00000266546 PTPN3P26045 913 aa11.45□□□□□ -0.58
CLSTN3-201ENST00000266546 BCAP31P51572 246 aa11.45□□□□□ -0.58
CLSTN3-201ENST00000266546 ECT2LQ008S8 904 aa11.45□□□□□ -0.58
CLSTN3-201ENST00000266546 ZNF252P-AS1Q0IIN9 211 aa11.45□□□□□ -0.58
CLSTN3-201ENST00000266546 TPGS2Q68CL5 300 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms