RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 PRDM8Q9NQV8 689 aa16.67■□□□□ 0.26
SQLE-201ENST00000265896 KANSL1LA0AUZ9 987 aa16.66■□□□□ 0.26
SQLE-201ENST00000265896 FDXRP22570 491 aa16.66■□□□□ 0.26
SQLE-201ENST00000265896 HRH2P25021 359 aa16.66■□□□□ 0.26
SQLE-201ENST00000265896 MAP4P27816 1152 aaKnown RBP16.66■□□□□ 0.26
SQLE-201ENST00000265896 PSMD8P48556 350 aa16.66■□□□□ 0.26
SQLE-201ENST00000265896 ATP6V0D1P61421 351 aa16.66■□□□□ 0.26
SQLE-201ENST00000265896 ZBED5Q49AG3 693 aa16.66■□□□□ 0.26
SQLE-201ENST00000265896 SEPT5Q99719 369 aaPredicted RBP16.66■□□□□ 0.26
SQLE-201ENST00000265896 CARS2Q9HA77 564 aaKnown RBP16.66■□□□□ 0.26
SQLE-201ENST00000265896 ARMC1Q9NVT9 282 aa16.66■□□□□ 0.26
SQLE-201ENST00000265896 SMPD3Q9NY59 655 aaPredicted RBP16.66■□□□□ 0.26
SQLE-201ENST00000265896 ANAPC2Q9UJX6 822 aa16.66■□□□□ 0.26
SQLE-201ENST00000265896 MED16Q9Y2X0 877 aa16.66■□□□□ 0.26
SQLE-201ENST00000265896 PCDHA9Q9Y5H5 950 aa16.66■□□□□ 0.26
SQLE-201ENST00000265896 MROH6A6NGR9 719 aa16.66■□□□□ 0.26
SQLE-201ENST00000265896 NT5C1B-RDH14C9J2C7 533 aa16.66■□□□□ 0.26
SQLE-201ENST00000265896 TNFRSF10BO14763 440 aa16.66■□□□□ 0.26
SQLE-201ENST00000265896 SLC7A4O43246 635 aa16.66■□□□□ 0.26
SQLE-201ENST00000265896 MLLT10P55197 1068 aa16.66■□□□□ 0.26
SQLE-201ENST00000265896 TPD52P55327 224 aaPredicted RBP16.66■□□□□ 0.26
SQLE-201ENST00000265896 FPGSQ05932 587 aa16.66■□□□□ 0.26
SQLE-201ENST00000265896 PTGR1Q14914 329 aa16.66■□□□□ 0.26
SQLE-201ENST00000265896 SETMARQ53H47 684 aaPredicted RBP16.66■□□□□ 0.26
SQLE-201ENST00000265896 GLYATQ6IB77 296 aa16.66■□□□□ 0.26
SQLE-201ENST00000265896 DCP1BQ8IZD4 617 aaKnown RBP16.66■□□□□ 0.26
SQLE-201ENST00000265896 LPCAT1Q8NF37 534 aa16.66■□□□□ 0.26
SQLE-201ENST00000265896 TANKQ92844 425 aa16.66■□□□□ 0.26
SQLE-201ENST00000265896 AURKBQ96GD4 344 aaPredicted RBP16.66■□□□□ 0.26
SQLE-201ENST00000265896 CDKN2AIPNLQ96HQ2 116 aa16.66■□□□□ 0.26
SQLE-201ENST00000265896 SDR39U1Q9NRG7 319 aaPredicted RBP16.66■□□□□ 0.26
SQLE-201ENST00000265896 ACTR3BQ9P1U1 418 aa16.66■□□□□ 0.26
SQLE-201ENST00000265896 GPR45Q9Y5Y3 372 aa16.66■□□□□ 0.26
SQLE-201ENST00000265896 NDUFS3O75489 264 aa16.65■□□□□ 0.26
SQLE-201ENST00000265896 SLC22A3O75751 556 aa16.65■□□□□ 0.26
SQLE-201ENST00000265896 LDLRP01130 860 aa16.65■□□□□ 0.26
SQLE-201ENST00000265896 G6PDP11413 515 aa16.65■□□□□ 0.26
SQLE-201ENST00000265896 HK3P52790 923 aa16.65■□□□□ 0.26
SQLE-201ENST00000265896 SH3BGRP55822 239 aaPredicted RBP16.65■□□□□ 0.26
SQLE-201ENST00000265896 RPS24P62847 133 aaKnown RBP16.65■□□□□ 0.26
SQLE-201ENST00000265896 ZRANB3Q5FWF4 1079 aa16.65■□□□□ 0.26
SQLE-201ENST00000265896 BRMS1LQ5PSV4 323 aa16.65■□□□□ 0.26
SQLE-201ENST00000265896 MRNIPQ6NTE8 343 aa16.65■□□□□ 0.26
SQLE-201ENST00000265896 BORAQ6PGQ7 559 aa16.65■□□□□ 0.26
SQLE-201ENST00000265896 ENPP6Q6UWR7 440 aa16.65■□□□□ 0.26
SQLE-201ENST00000265896 TAS2R42Q7RTR8 314 aa16.65■□□□□ 0.26
SQLE-201ENST00000265896 SLC22A15Q8IZD6 547 aa16.65■□□□□ 0.26
SQLE-201ENST00000265896 LZTR1Q8N653 840 aa16.65■□□□□ 0.26
SQLE-201ENST00000265896 ROPN1LQ96C74 230 aa16.65■□□□□ 0.26
SQLE-201ENST00000265896 L3HYPDHQ96EM0 354 aa16.65■□□□□ 0.26
SQLE-201ENST00000265896 UHRF1Q96T88 793 aaPredicted RBP16.65■□□□□ 0.26
SQLE-201ENST00000265896 C9orf16Q9BUW7 83 aa16.65■□□□□ 0.26
SQLE-201ENST00000265896 GID8Q9NWU2 228 aa16.65■□□□□ 0.26
SQLE-201ENST00000265896 SNX2O60749 519 aa16.65■□□□□ 0.26
SQLE-201ENST00000265896 AGXTP21549 392 aa16.65■□□□□ 0.26
SQLE-201ENST00000265896 MYF6P23409 242 aa16.65■□□□□ 0.26
SQLE-201ENST00000265896 RFC2P35250 354 aa16.65■□□□□ 0.26
SQLE-201ENST00000265896 MAGEA10P43363 369 aaPredicted RBP16.65■□□□□ 0.26
SQLE-201ENST00000265896 POLR2JP52435 117 aaKnown RBP16.65■□□□□ 0.26
SQLE-201ENST00000265896 LCP2Q13094 533 aa16.65■□□□□ 0.26
SQLE-201ENST00000265896 ATP6AP1Q15904 470 aa16.65■□□□□ 0.26
SQLE-201ENST00000265896 MEP1AQ16819 746 aa16.65■□□□□ 0.26
SQLE-201ENST00000265896 GTDC1Q4AE62 458 aa16.65■□□□□ 0.26
SQLE-201ENST00000265896 LDLRAD1Q5T700 205 aa16.65■□□□□ 0.26
SQLE-201ENST00000265896 KANK2Q63ZY3 851 aa16.65■□□□□ 0.26
SQLE-201ENST00000265896 ANKS6Q68DC2 871 aa16.65■□□□□ 0.26
SQLE-201ENST00000265896 IL27RAQ6UWB1 636 aa16.65■□□□□ 0.26
SQLE-201ENST00000265896 ABRAXAS1Q6UWZ7 409 aa16.65■□□□□ 0.26
SQLE-201ENST00000265896 PHACTR4Q8IZ21 702 aa16.65■□□□□ 0.26
SQLE-201ENST00000265896 PAF1Q8N7H5 531 aa16.65■□□□□ 0.26
SQLE-201ENST00000265896 CHCHD3Q9NX63 227 aaKnown RBP16.65■□□□□ 0.26
SQLE-201ENST00000265896 FKBPLQ9UIM3 349 aa16.65■□□□□ 0.26
SQLE-201ENST00000265896 KRT87PA6NCN2 255 aa16.65■□□□□ 0.26
SQLE-201ENST00000265896 ACADVLP49748 655 aa16.65■□□□□ 0.26
SQLE-201ENST00000265896 CPT1AP50416 773 aa16.65■□□□□ 0.26
SQLE-201ENST00000265896 ITGADQ13349 1161 aa16.65■□□□□ 0.26
SQLE-201ENST00000265896 GALNT18Q6P9A2 607 aa16.65■□□□□ 0.26
SQLE-201ENST00000265896 C16orf59Q7L2K0 433 aa16.65■□□□□ 0.26
SQLE-201ENST00000265896 PATL1Q86TB9 770 aaKnown RBP16.65■□□□□ 0.26
SQLE-201ENST00000265896 THEM5Q8N1Q8 247 aa16.65■□□□□ 0.26
SQLE-201ENST00000265896 DTWD1Q8N5C7 304 aa16.65■□□□□ 0.26
SQLE-201ENST00000265896 PTCD2Q8WV60 388 aaKnown RBP16.65■□□□□ 0.26
SQLE-201ENST00000265896 FUBP1Q96AE4 644 aaKnown RBP16.65■□□□□ 0.26
SQLE-201ENST00000265896 HOPXQ9BPY8 73 aaPredicted RBP16.65■□□□□ 0.26
SQLE-201ENST00000265896 PCDH10Q9P2E7 1040 aa16.65■□□□□ 0.26
SQLE-201ENST00000265896 VPS4AQ9UN37 437 aa16.65■□□□□ 0.26
SQLE-201ENST00000265896 ZSWIM8A7E2V4 1837 aa16.64■□□□□ 0.26
SQLE-201ENST00000265896 UPK3BL1B0FP48 263 aa16.64■□□□□ 0.25
SQLE-201ENST00000265896 UPK3BL2E5RIL1 263 aa16.64■□□□□ 0.25
SQLE-201ENST00000265896 BMP10O95393 424 aa16.64■□□□□ 0.25
SQLE-201ENST00000265896 C1QCP02747 245 aa16.64■□□□□ 0.25
SQLE-201ENST00000265896 ALBP02768 609 aa16.64■□□□□ 0.25
SQLE-201ENST00000265896 GSNP06396 782 aa16.64■□□□□ 0.25
SQLE-201ENST00000265896 DNAJB2P25686 324 aa16.64■□□□□ 0.25
SQLE-201ENST00000265896 HMGCS1Q01581 520 aa16.64■□□□□ 0.25
SQLE-201ENST00000265896 EIF4EBP2Q13542 120 aaPredicted RBP16.64■□□□□ 0.25
SQLE-201ENST00000265896 ADRM1Q16186 407 aa16.64■□□□□ 0.25
SQLE-201ENST00000265896 GALNT10Q86SR1 603 aa16.64■□□□□ 0.25
SQLE-201ENST00000265896 SEPT8Q92599 483 aa16.64■□□□□ 0.25
SQLE-201ENST00000265896 TMBIM1Q969X1 311 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms