RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 MED11Q9P086 117 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 SEC14L4Q9UDX3 406 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 PCDHGC3Q9UN70 934 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 NRP2O60462 931 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 ULK1O75385 1050 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 RHOCP08134 193 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 PTP4A2Q12974 167 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.67□□□□□ -1.5
VCAN-201ENST00000265077 USP43Q70EL4 1123 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 ALG3Q92685 438 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 SEMA4DQ92854 862 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 ATG4CQ96DT6 458 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 USP29Q9HBJ7 922 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 SAE1Q9UBE0 346 aaPredicted RBP5.67□□□□□ -1.5
VCAN-201ENST00000265077 PDE10AQ9Y233 779 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 ANGPT4Q9Y264 503 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 GRIP1Q9Y3R0 1128 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 PPP2R3BQ9Y5P8 575 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 CPSF4O95639 269 aaKnown RBP5.67□□□□□ -1.5
VCAN-201ENST00000265077 ZNF182P17025 639 aaPredicted RBP5.67□□□□□ -1.5
VCAN-201ENST00000265077 HOXD13P35453 343 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 ALDH7A1P49419 539 aaKnown RBP5.67□□□□□ -1.5
VCAN-201ENST00000265077 CLCN3P51790 818 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 INHBCP55103 352 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 C1orf186Q6ZWK4 172 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 GLT6D1Q7Z4J2 308 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 PGAM4Q8N0Y7 254 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 ZNF671Q8TAW3 534 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 DNAJA4Q8WW22 397 aaPredicted RBP5.67□□□□□ -1.5
VCAN-201ENST00000265077 NKD2Q969F2 451 aaPredicted RBP5.67□□□□□ -1.5
VCAN-201ENST00000265077 BBS4Q96RK4 519 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 TAS2R14Q9NYV8 317 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 ZNF112Q9UJU3 913 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 TGM6O95932 706 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 APOC3P02656 99 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 PROS1P07225 676 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 DGKAP23743 735 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 ALDH9A1P49189 494 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 EPHB3P54753 998 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 GNASQ5JWF2 1037 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 C3orf33Q6P1S2 294 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 LSMEM1Q8N8F7 131 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 ZNF540Q8NDQ6 660 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 OR8K5Q8NH50 307 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 DEDD2Q8WXF8 326 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 IL17RBQ9NRM6 502 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 IKZF3Q9UKT9 509 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 MEGF6O75095 1541 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 DDX3YO15523 660 aaKnown RBP5.67□□□□□ -1.5
VCAN-201ENST00000265077 SEC22BO75396 215 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 PPM1BO75688 479 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 LRG1P02750 347 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 ZNF37AP17032 561 aaPredicted RBP5.67□□□□□ -1.5
VCAN-201ENST00000265077 NFKB1P19838 968 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 GSTM2P28161 218 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 CAPZA1P52907 286 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 UGT2B15P54855 530 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 AIF1P55008 147 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 CASP7P55210 303 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 CES3Q6UWW8 571 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 VASH1Q7L8A9 365 aaPredicted RBP5.67□□□□□ -1.5
VCAN-201ENST00000265077 PEG10Q86TG7 708 aaKnown RBP5.67□□□□□ -1.5
VCAN-201ENST00000265077 METTL4Q8N3J2 472 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 PACRGLQ8N7B6 248 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 UXS1Q8NBZ7 420 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 WNT8BQ93098 351 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 LENG9Q96B70 501 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 VPS28Q9UK41 221 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 HEATR5BQ9P2D3 2071 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 CYP3A7-CYP3A51PA0A087WV96 503 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 NKRFO15226 690 aaKnown RBP eCLIP5.67□□□□□ -1.5
VCAN-201ENST00000265077 YBX3P16989 372 aaKnown RBP eCLIP5.67□□□□□ -1.5
VCAN-201ENST00000265077 CYP3A7P24462 503 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 GPR85P60893 370 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 POLR2LP62875 67 aaKnown RBP5.67□□□□□ -1.5
VCAN-201ENST00000265077 ACSM2AQ08AH3 577 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 ACSM2BQ68CK6 577 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 PAOXQ6QHF9 649 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 CCBE1Q6UXH8 406 aaPredicted RBP5.67□□□□□ -1.5
VCAN-201ENST00000265077 LILRB1Q8NHL6 650 aaPredicted RBP5.67□□□□□ -1.5
VCAN-201ENST00000265077 LNX1Q8TBB1 728 aaPredicted RBP5.67□□□□□ -1.5
VCAN-201ENST00000265077 ZDHHC12Q96GR4 267 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 TAAR1Q96RJ0 339 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 DEFB129Q9H1M3 183 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 ELP3Q9H9T3 547 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 C12orf10Q9HB07 376 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 COPZ2Q9P299 210 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 PCDHGB3Q9Y5G1 929 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 FAM86B1E9PN63 330 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 F8VP50 259 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 FAM86B2P0C5J1 330 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 OR56A5P0C7T3 313 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 ZNF14P17017 642 aaPredicted RBP5.67□□□□□ -1.5
VCAN-201ENST00000265077 SDC2P34741 201 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 SHMT1P34896 483 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 OR1G1P47890 313 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 HYIQ5T013 277 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.67□□□□□ -1.5
VCAN-201ENST00000265077 ZCCHC23Q6ZST2 131 aa5.67□□□□□ -1.5
VCAN-201ENST00000265077 MIB1Q86YT6 1006 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms