RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 TPGS1Q6ZTW0 290 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 ZNF534Q76KX8 674 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 BTN2A1Q7KYR7 527 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 FAM124AQ86V42 546 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 NECTIN4Q96NY8 510 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 CLSTN3Q9BQT9 956 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 RTKNQ9BST9 563 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 AARSD1Q9BTE6 412 aaKnown RBP8.17□□□□□ -1.1
PTPN3-201ENST00000262539 ADAM33Q9BZ11 813 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 TLE6Q9H808 572 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 GDE1Q9NZC3 331 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 COQ6Q9Y2Z9 468 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 TP73O15350 636 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 NEK2P51955 445 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 CYP4Z1Q86W10 505 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 LINC01599Q8WXQ3 324 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 ITM2CQ9NQX7 267 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 AHSPQ9NZD4 102 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 MYH9P35579 1960 aaKnown RBP8.17□□□□□ -1.1
PTPN3-201ENST00000262539 SERPINB3P29508 390 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 RRM2P31350 389 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 MTHFRP42898 656 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 WDR5P61964 334 aaKnown RBP8.17□□□□□ -1.1
PTPN3-201ENST00000262539 CYLC2Q14093 348 aaPredicted RBP8.17□□□□□ -1.1
PTPN3-201ENST00000262539 PAGE2BQ5JRK9 111 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 MAB21L3Q8N8X9 362 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 AVL9Q8NBF6 648 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 OR8D1Q8WZ84 308 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 CNPPD1Q9BV87 410 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 FAM83DQ9H4H8 585 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 RAD21L1Q9H4I0 556 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 ZDHHC6Q9H6R6 413 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 MIEF1Q9NQG6 463 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 ANAPC2Q9UJX6 822 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 A8MX80 341 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 SNNO75324 88 aaPredicted RBP8.17□□□□□ -1.1
PTPN3-201ENST00000262539 NPPAP01160 153 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 FOXN2P32314 431 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 NFKB2Q00653 900 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 DSC2Q02487 901 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 CARD16Q5EG05 197 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 HACD2Q6Y1H2 254 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 ZNF765Q7L2R6 523 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 SCUBE1Q8IWY4 988 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 ARNTL2Q8WYA1 636 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 NOD2Q9HC29 1040 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 EXOSC4Q9NPD3 245 aaKnown RBP8.17□□□□□ -1.1
PTPN3-201ENST00000262539 TLR9Q9NR96 1032 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 MYH11P35749 1972 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 KPNA3O00505 521 aaPredicted RBP8.17□□□□□ -1.1
PTPN3-201ENST00000262539 CCDC166P0CW27 439 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 TPH1P17752 444 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 ME2P23368 584 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 HNF4AP41235 474 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 PRSS55Q6UWB4 352 aaPredicted RBP8.17□□□□□ -1.1
PTPN3-201ENST00000262539 NEK10Q6ZWH5 1172 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 CPA6Q8N4T0 437 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 TUBGCP3Q96CW5 907 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 MRPL48Q96GC5 212 aaKnown RBP8.17□□□□□ -1.1
PTPN3-201ENST00000262539 SCLYQ96I15 445 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 MRGPRX2Q96LB1 330 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 RIPOR3Q96MK2 946 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 MCCC1Q96RQ3 725 aaPredicted RBP8.17□□□□□ -1.1
PTPN3-201ENST00000262539 RMND5AQ9H871 391 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 ZNF304Q9HCX3 659 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 VPS51Q9UID3 782 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 UMPSP11172 480 aa8.16□□□□□ -1.1
PTPN3-201ENST00000262539 PRPS2P11908 318 aa8.16□□□□□ -1.1
PTPN3-201ENST00000262539 HOXD9P28356 352 aaPredicted RBP8.16□□□□□ -1.1
PTPN3-201ENST00000262539 ADRA1AP35348 466 aa8.16□□□□□ -1.1
PTPN3-201ENST00000262539 NUP62P37198 522 aaPredicted RBP8.16□□□□□ -1.1
PTPN3-201ENST00000262539 CLK3P49761 638 aaKnown RBP8.16□□□□□ -1.1
PTPN3-201ENST00000262539 CYP51A1Q16850 503 aa8.16□□□□□ -1.1
PTPN3-201ENST00000262539 POM121L1PQ3SYA9 428 aa8.16□□□□□ -1.1
PTPN3-201ENST00000262539 GPR158Q5T848 1215 aa8.16□□□□□ -1.1
PTPN3-201ENST00000262539 CILP2Q8IUL8 1156 aa8.16□□□□□ -1.1
PTPN3-201ENST00000262539 NPWQ8N729 165 aa8.16□□□□□ -1.1
PTPN3-201ENST00000262539 MZB1Q8WU39 189 aa8.16□□□□□ -1.1
PTPN3-201ENST00000262539 PWWP2AQ96N64 755 aa8.16□□□□□ -1.1
PTPN3-201ENST00000262539 CCSER2Q9H7U1 834 aa8.16□□□□□ -1.1
PTPN3-201ENST00000262539 C10orf88Q9H8K7 445 aa8.16□□□□□ -1.1
PTPN3-201ENST00000262539 RNF19AQ9NV58 838 aa8.16□□□□□ -1.1
PTPN3-201ENST00000262539 DKK3Q9UBP4 350 aa8.16□□□□□ -1.1
PTPN3-201ENST00000262539 CAPN8A6NHC0 703 aa8.16□□□□□ -1.1
PTPN3-201ENST00000262539 E9PBE3 544 aa8.16□□□□□ -1.1
PTPN3-201ENST00000262539 ATXN1P54253 815 aaKnown RBP8.16□□□□□ -1.1
PTPN3-201ENST00000262539 SETMARQ53H47 684 aaPredicted RBP8.16□□□□□ -1.1
PTPN3-201ENST00000262539 CEP78Q5JTW2 689 aa8.16□□□□□ -1.1
PTPN3-201ENST00000262539 ATAT1Q5SQI0 421 aa8.16□□□□□ -1.1
PTPN3-201ENST00000262539 OGFOD2Q6N063 350 aa8.16□□□□□ -1.1
PTPN3-201ENST00000262539 RNF19BQ6ZMZ0 732 aa8.16□□□□□ -1.1
PTPN3-201ENST00000262539 PTAR1Q7Z6K3 402 aaPredicted RBP8.16□□□□□ -1.1
PTPN3-201ENST00000262539 PRPF39Q86UA1 669 aaKnown RBP8.16□□□□□ -1.1
PTPN3-201ENST00000262539 FSTL5Q8N475 847 aaPredicted RBP8.16□□□□□ -1.1
PTPN3-201ENST00000262539 PTGR2Q8N8N7 351 aaPredicted RBP8.16□□□□□ -1.1
PTPN3-201ENST00000262539 OR7D4Q8NG98 312 aa8.16□□□□□ -1.1
PTPN3-201ENST00000262539 REXO5Q96IC2 774 aaKnown RBP8.16□□□□□ -1.1
PTPN3-201ENST00000262539 CORO1BQ9BR76 489 aa8.16□□□□□ -1.1
PTPN3-201ENST00000262539 IL17CQ9P0M4 197 aa8.16□□□□□ -1.1
PTPN3-201ENST00000262539 SLC17A7Q9P2U7 560 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms