RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 HS3ST5Q8IZT8 346 aa17.33■□□□□ 0.36
TRAM1-201ENST00000262213 FNDC5Q8NAU1 212 aa17.33■□□□□ 0.36
TRAM1-201ENST00000262213 OR2T11Q8NH01 316 aa17.33■□□□□ 0.36
TRAM1-201ENST00000262213 CSNK1G1Q9HCP0 422 aa17.33■□□□□ 0.36
TRAM1-201ENST00000262213 EXD2Q9NVH0 621 aa17.33■□□□□ 0.36
TRAM1-201ENST00000262213 LEF1Q9UJU2 399 aaPredicted RBP17.33■□□□□ 0.36
TRAM1-201ENST00000262213 PCDHGA11Q9Y5H2 935 aa17.33■□□□□ 0.36
TRAM1-201ENST00000262213 XYLBO75191 536 aa17.32■□□□□ 0.36
TRAM1-201ENST00000262213 ECI2O75521 394 aa17.32■□□□□ 0.36
TRAM1-201ENST00000262213 SERPINB7O75635 380 aa17.32■□□□□ 0.36
TRAM1-201ENST00000262213 FAM163BP0C2L3 166 aa17.32■□□□□ 0.36
TRAM1-201ENST00000262213 OR4Q2P0C623 313 aa17.32■□□□□ 0.36
TRAM1-201ENST00000262213 MBL2P11226 248 aaPredicted RBP17.32■□□□□ 0.36
TRAM1-201ENST00000262213 ARSFP54793 590 aa17.32■□□□□ 0.36
TRAM1-201ENST00000262213 LAPTM5Q13571 262 aa17.32■□□□□ 0.36
TRAM1-201ENST00000262213 RCAN2Q14206 197 aa17.32■□□□□ 0.36
TRAM1-201ENST00000262213 PCBP1Q15365 356 aaKnown RBP eCLIP17.32■□□□□ 0.36
TRAM1-201ENST00000262213 AASDHQ4L235 1098 aaPredicted RBP17.32■□□□□ 0.36
TRAM1-201ENST00000262213 ANKS6Q68DC2 871 aa17.32■□□□□ 0.36
TRAM1-201ENST00000262213 BTLAQ7Z6A9 289 aa17.32■□□□□ 0.36
TRAM1-201ENST00000262213 TMCO5AQ8N6Q1 288 aa17.32■□□□□ 0.36
TRAM1-201ENST00000262213 OR10T2Q8NGX3 314 aa17.32■□□□□ 0.36
TRAM1-201ENST00000262213 ZC3H15Q8WU90 426 aaKnown RBP17.32■□□□□ 0.36
TRAM1-201ENST00000262213 ASB2Q96Q27 587 aa17.32■□□□□ 0.36
TRAM1-201ENST00000262213 TINF2Q9BSI4 451 aa17.32■□□□□ 0.36
TRAM1-201ENST00000262213 AIG1Q9NVV5 245 aa17.32■□□□□ 0.36
TRAM1-201ENST00000262213 PCDHGA4Q9Y5G9 962 aa17.32■□□□□ 0.36
TRAM1-201ENST00000262213 A0A1W2PQH9 124 aa17.32■□□□□ 0.36
TRAM1-201ENST00000262213 F2P00734 622 aa17.32■□□□□ 0.36
TRAM1-201ENST00000262213 RGS21Q2M5E4 152 aa17.32■□□□□ 0.36
TRAM1-201ENST00000262213 PERM1Q5SV97 790 aa17.32■□□□□ 0.36
TRAM1-201ENST00000262213 SNX29P2Q8IUI4 249 aa17.32■□□□□ 0.36
TRAM1-201ENST00000262213 PGBD5Q8N414 524 aa17.32■□□□□ 0.36
TRAM1-201ENST00000262213 TMEM199Q8N511 208 aa17.32■□□□□ 0.36
TRAM1-201ENST00000262213 CDYL2Q8N8U2 506 aa17.32■□□□□ 0.36
TRAM1-201ENST00000262213 SEMA3CQ99985 751 aa17.32■□□□□ 0.36
TRAM1-201ENST00000262213 NTN4Q9HB63 628 aa17.32■□□□□ 0.36
TRAM1-201ENST00000262213 ATP13A1Q9HD20 1204 aa17.32■□□□□ 0.36
TRAM1-201ENST00000262213 ABCC13Q9NSE7 274 aa17.32■□□□□ 0.36
TRAM1-201ENST00000262213 GALPQ9UBC7 116 aa17.32■□□□□ 0.36
TRAM1-201ENST00000262213 TOR1BO14657 336 aa17.31■□□□□ 0.36
TRAM1-201ENST00000262213 TNPO2O14787 897 aaKnown RBP17.31■□□□□ 0.36
TRAM1-201ENST00000262213 ADAM23O75077 832 aa17.31■□□□□ 0.36
TRAM1-201ENST00000262213 CDH3P22223 829 aa17.31■□□□□ 0.36
TRAM1-201ENST00000262213 HOXC13P31276 330 aa17.31■□□□□ 0.36
TRAM1-201ENST00000262213 ZFP36L2P47974 494 aaKnown RBP17.31■□□□□ 0.36
TRAM1-201ENST00000262213 CRYBB1P53674 252 aaPredicted RBP17.31■□□□□ 0.36
TRAM1-201ENST00000262213 FOXM1Q08050 763 aa17.31■□□□□ 0.36
TRAM1-201ENST00000262213 MEP1AQ16819 746 aa17.31■□□□□ 0.36
TRAM1-201ENST00000262213 ARTNQ5T4W7 220 aa17.31■□□□□ 0.36
TRAM1-201ENST00000262213 SCD5Q86SK9 330 aa17.31■□□□□ 0.36
TRAM1-201ENST00000262213 IGFN1Q86VF2 1251 aa17.31■□□□□ 0.36
TRAM1-201ENST00000262213 GOLM1Q8NBJ4 401 aa17.31■□□□□ 0.36
TRAM1-201ENST00000262213 FBXO30Q8TB52 745 aa17.31■□□□□ 0.36
TRAM1-201ENST00000262213 ABHD16BQ9H3Z7 469 aa17.31■□□□□ 0.36
TRAM1-201ENST00000262213 ARL5CA6NH57 179 aa17.31■□□□□ 0.36
TRAM1-201ENST00000262213 F8W810 466 aa17.31■□□□□ 0.36
TRAM1-201ENST00000262213 BTN3A1O00481 513 aa17.31■□□□□ 0.36
TRAM1-201ENST00000262213 PAPSS2O95340 614 aaPredicted RBP17.31■□□□□ 0.36
TRAM1-201ENST00000262213 HMBSP08397 361 aa17.31■□□□□ 0.36
TRAM1-201ENST00000262213 C7P10643 843 aa17.31■□□□□ 0.36
TRAM1-201ENST00000262213 THRBP10828 461 aa17.31■□□□□ 0.36
TRAM1-201ENST00000262213 HOXD8P13378 290 aaPredicted RBP17.31■□□□□ 0.36
TRAM1-201ENST00000262213 PSEN2P49810 448 aa17.31■□□□□ 0.36
TRAM1-201ENST00000262213 DGKQP52824 942 aa17.31■□□□□ 0.36
TRAM1-201ENST00000262213 PDCD4Q53EL6 469 aaKnown RBP17.31■□□□□ 0.36
TRAM1-201ENST00000262213 XAF1Q6GPH4 301 aa17.31■□□□□ 0.36
TRAM1-201ENST00000262213 MRNIPQ6NTE8 343 aa17.31■□□□□ 0.36
TRAM1-201ENST00000262213 PTRH1Q86Y79 214 aaKnown RBP17.31■□□□□ 0.36
TRAM1-201ENST00000262213 FAM86B1Q8N7N1 296 aa17.31■□□□□ 0.36
TRAM1-201ENST00000262213 NPLOC4Q8TAT6 608 aa17.31■□□□□ 0.36
TRAM1-201ENST00000262213 FIG4Q92562 907 aa17.31■□□□□ 0.36
TRAM1-201ENST00000262213 CCDC138Q96M89 665 aa17.31■□□□□ 0.36
TRAM1-201ENST00000262213 HGH1Q9BTY7 390 aa17.31■□□□□ 0.36
TRAM1-201ENST00000262213 CCDC90BQ9GZT6 254 aa17.31■□□□□ 0.36
TRAM1-201ENST00000262213 TOR3AQ9H497 397 aa17.31■□□□□ 0.36
TRAM1-201ENST00000262213 CATSPERZQ9NTU4 200 aa17.31■□□□□ 0.36
TRAM1-201ENST00000262213 SLC27A5Q9Y2P5 690 aa17.31■□□□□ 0.36
TRAM1-201ENST00000262213 TRIM43BA6NCK2 446 aa17.3■□□□□ 0.36
TRAM1-201ENST00000262213 TMEM221A6NGB7 291 aa17.3■□□□□ 0.36
TRAM1-201ENST00000262213 PTGES3LE9PB15 166 aa17.3■□□□□ 0.36
TRAM1-201ENST00000262213 EEDO75530 441 aaKnown RBP17.3■□□□□ 0.36
TRAM1-201ENST00000262213 CPNE6O95741 557 aa17.3■□□□□ 0.36
TRAM1-201ENST00000262213 ATXN1LP0C7T5 689 aaKnown RBP17.3■□□□□ 0.36
TRAM1-201ENST00000262213 SLC26A3P40879 764 aa17.3■□□□□ 0.36
TRAM1-201ENST00000262213 MTHFRP42898 656 aa17.3■□□□□ 0.36
TRAM1-201ENST00000262213 PLA2G16P53816 162 aa17.3■□□□□ 0.36
TRAM1-201ENST00000262213 SPCS2Q15005 226 aa17.3■□□□□ 0.36
TRAM1-201ENST00000262213 METTL23Q86XA0 190 aa17.3■□□□□ 0.36
TRAM1-201ENST00000262213 COLGALT2Q8IYK4 626 aa17.3■□□□□ 0.36
TRAM1-201ENST00000262213 PARP8Q8N3A8 854 aa17.3■□□□□ 0.36
TRAM1-201ENST00000262213 DTWD1Q8N5C7 304 aa17.3■□□□□ 0.36
TRAM1-201ENST00000262213 ITFG1Q8TB96 612 aa17.3■□□□□ 0.36
TRAM1-201ENST00000262213 SLC22A17Q8WUG5 538 aa17.3■□□□□ 0.36
TRAM1-201ENST00000262213 NRBF2Q96F24 287 aa17.3■□□□□ 0.36
TRAM1-201ENST00000262213 RAD21L1Q9H4I0 556 aa17.3■□□□□ 0.36
TRAM1-201ENST00000262213 FAM105AQ9NUU6 356 aa17.3■□□□□ 0.36
TRAM1-201ENST00000262213 OSER1Q9NX31 292 aa17.3■□□□□ 0.36
TRAM1-201ENST00000262213 ZNF225Q9UK10 706 aa17.3■□□□□ 0.36
TRAM1-201ENST00000262213 ASB1Q9Y576 335 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms