RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 EXOC2Q96KP1 924 aa16.1■□□□□ 0.17
SREBF1-201ENST00000261646 SERPINB11Q96P15 392 aa16.1■□□□□ 0.17
SREBF1-201ENST00000261646 GAD1Q99259 594 aa16.1■□□□□ 0.17
SREBF1-201ENST00000261646 NXF3Q9H4D5 531 aaKnown RBP16.1■□□□□ 0.17
SREBF1-201ENST00000261646 DNAJB9Q9UBS3 223 aa16.1■□□□□ 0.17
SREBF1-201ENST00000261646 NPEPPSL1A6NEC2 478 aa16.1■□□□□ 0.17
SREBF1-201ENST00000261646 SERPIND1P05546 499 aa16.1■□□□□ 0.17
SREBF1-201ENST00000261646 SLC10A2Q12908 348 aaPredicted RBP16.1■□□□□ 0.17
SREBF1-201ENST00000261646 CDCA5Q96FF9 252 aa16.1■□□□□ 0.17
SREBF1-201ENST00000261646 PANX1Q96RD7 426 aa16.1■□□□□ 0.17
SREBF1-201ENST00000261646 SMURF2Q9HAU4 748 aa16.1■□□□□ 0.17
SREBF1-201ENST00000261646 CCM2LQ9NUG4 571 aaPredicted RBP16.1■□□□□ 0.17
SREBF1-201ENST00000261646 TJP1Q07157 1748 aa16.1■□□□□ 0.17
SREBF1-201ENST00000261646 CCRL2O00421 344 aa16.09■□□□□ 0.17
SREBF1-201ENST00000261646 COX7A2P14406 83 aa16.09■□□□□ 0.17
SREBF1-201ENST00000261646 IMPDH1P20839 514 aa16.09■□□□□ 0.17
SREBF1-201ENST00000261646 PRKACGP22612 351 aa16.09■□□□□ 0.17
SREBF1-201ENST00000261646 GRIA2P42262 883 aa16.09■□□□□ 0.17
SREBF1-201ENST00000261646 IST1P53990 364 aa16.09■□□□□ 0.17
SREBF1-201ENST00000261646 CDC42P60953 191 aa16.09■□□□□ 0.17
SREBF1-201ENST00000261646 VBP1P61758 197 aa16.09■□□□□ 0.17
SREBF1-201ENST00000261646 NEK5Q6P3R8 708 aa16.09■□□□□ 0.17
SREBF1-201ENST00000261646 KBTBD7Q8WVZ9 684 aa16.09■□□□□ 0.17
SREBF1-201ENST00000261646 STON2Q8WXE9 905 aa16.09■□□□□ 0.17
SREBF1-201ENST00000261646 BIRC7Q96CA5 298 aa16.09■□□□□ 0.17
SREBF1-201ENST00000261646 FEM1CQ96JP0 617 aa16.09■□□□□ 0.17
SREBF1-201ENST00000261646 SPRTNQ9H040 489 aaPredicted RBP16.09■□□□□ 0.17
SREBF1-201ENST00000261646 DCSTAMPQ9H295 470 aa16.09■□□□□ 0.17
SREBF1-201ENST00000261646 MAGEE1Q9HCI5 957 aa16.09■□□□□ 0.17
SREBF1-201ENST00000261646 COL14A1Q05707 1796 aaKnown RBP16.09■□□□□ 0.17
SREBF1-201ENST00000261646 BTBD19C9JJ37 291 aa16.09■□□□□ 0.17
SREBF1-201ENST00000261646 TP73O15350 636 aa16.09■□□□□ 0.17
SREBF1-201ENST00000261646 IFNA14P01570 189 aa16.09■□□□□ 0.17
SREBF1-201ENST00000261646 TMBIM6P55061 237 aa16.09■□□□□ 0.17
SREBF1-201ENST00000261646 LAPTM5Q13571 262 aa16.09■□□□□ 0.17
SREBF1-201ENST00000261646 SYPL2Q5VXT5 272 aa16.09■□□□□ 0.17
SREBF1-201ENST00000261646 C9orf57Q5W0N0 161 aa16.09■□□□□ 0.17
SREBF1-201ENST00000261646 PLPPR4Q7Z2D5 763 aa16.09■□□□□ 0.17
SREBF1-201ENST00000261646 MIR1-1HGQ9H1L0 117 aa16.09■□□□□ 0.17
SREBF1-201ENST00000261646 ERGIC3Q9Y282 383 aa16.09■□□□□ 0.17
SREBF1-201ENST00000261646 FAM220BPB1ANY3 271 aa16.09■□□□□ 0.17
SREBF1-201ENST00000261646 DPYSL4O14531 572 aa16.09■□□□□ 0.17
SREBF1-201ENST00000261646 OTCP00480 354 aa16.09■□□□□ 0.17
SREBF1-201ENST00000261646 SERPINA1P01009 418 aa16.09■□□□□ 0.17
SREBF1-201ENST00000261646 GRM5P41594 1212 aa16.09■□□□□ 0.17
SREBF1-201ENST00000261646 SRP54P61011 504 aaKnown RBP16.09■□□□□ 0.17
SREBF1-201ENST00000261646 ALDH6A1Q02252 535 aaKnown RBP16.09■□□□□ 0.17
SREBF1-201ENST00000261646 SPPL2BQ8TCT7 592 aa16.09■□□□□ 0.17
SREBF1-201ENST00000261646 TOR3AQ9H497 397 aa16.09■□□□□ 0.17
SREBF1-201ENST00000261646 ARL15Q9NXU5 204 aa16.09■□□□□ 0.17
SREBF1-201ENST00000261646 SLC2A6Q9UGQ3 507 aa16.09■□□□□ 0.17
SREBF1-201ENST00000261646 SRCAPQ6ZRS2 3230 aa16.09■□□□□ 0.17
SREBF1-201ENST00000261646 ARSFP54793 590 aa16.08■□□□□ 0.17
SREBF1-201ENST00000261646 TXNDC11Q6PKC3 985 aa16.08■□□□□ 0.17
SREBF1-201ENST00000261646 DCDC5Q6ZRR9 648 aa16.08■□□□□ 0.17
SREBF1-201ENST00000261646 MLPHQ9BV36 600 aaPredicted RBP16.08■□□□□ 0.17
SREBF1-201ENST00000261646 FAM126AQ9BYI3 521 aaPredicted RBP16.08■□□□□ 0.17
SREBF1-201ENST00000261646 RIMS3Q9UJD0 308 aa16.08■□□□□ 0.17
SREBF1-201ENST00000261646 H3BMQ9 156 aa16.08■□□□□ 0.16
SREBF1-201ENST00000261646 NDUFB5O43674 189 aa16.08■□□□□ 0.16
SREBF1-201ENST00000261646 STAU1O95793 577 aaKnown RBP16.08■□□□□ 0.16
SREBF1-201ENST00000261646 SLC11A2P49281 568 aa16.08■□□□□ 0.16
SREBF1-201ENST00000261646 OR2B6P58173 313 aa16.08■□□□□ 0.16
SREBF1-201ENST00000261646 ACSM2AQ08AH3 577 aa16.08■□□□□ 0.16
SREBF1-201ENST00000261646 ELP6Q0PNE2 266 aa16.08■□□□□ 0.16
SREBF1-201ENST00000261646 IL18R1Q13478 541 aa16.08■□□□□ 0.16
SREBF1-201ENST00000261646 RNF219Q5W0B1 726 aaPredicted RBP16.08■□□□□ 0.16
SREBF1-201ENST00000261646 ACSM2BQ68CK6 577 aa16.08■□□□□ 0.16
SREBF1-201ENST00000261646 ZNF544Q6NX49 715 aa16.08■□□□□ 0.16
SREBF1-201ENST00000261646 DCLRE1AQ6PJP8 1040 aa16.08■□□□□ 0.16
SREBF1-201ENST00000261646 TTC29Q8NA56 475 aaPredicted RBP16.08■□□□□ 0.16
SREBF1-201ENST00000261646 SLC45A3Q96JT2 553 aa16.08■□□□□ 0.16
SREBF1-201ENST00000261646 COG8Q96MW5 612 aa16.08■□□□□ 0.16
SREBF1-201ENST00000261646 FOPNLQ96NB1 174 aa16.08■□□□□ 0.16
SREBF1-201ENST00000261646 PDZD7Q9H5P4 517 aa16.08■□□□□ 0.16
SREBF1-201ENST00000261646 OR51F1A6NGY5 319 aa16.08■□□□□ 0.16
SREBF1-201ENST00000261646 TRIM64CA6NLI5 447 aa16.08■□□□□ 0.16
SREBF1-201ENST00000261646 H0YJX3 145 aa16.08■□□□□ 0.16
SREBF1-201ENST00000261646 PAGE1O75459 146 aa16.08■□□□□ 0.16
SREBF1-201ENST00000261646 ENO2P09104 434 aaPredicted RBP16.08■□□□□ 0.16
SREBF1-201ENST00000261646 GNAO1P09471 354 aa16.08■□□□□ 0.16
SREBF1-201ENST00000261646 GSTT2P0CG29 244 aa16.08■□□□□ 0.16
SREBF1-201ENST00000261646 GSTT2BP0CG30 244 aa16.08■□□□□ 0.16
SREBF1-201ENST00000261646 EPB42P16452 691 aa16.08■□□□□ 0.16
SREBF1-201ENST00000261646 TUBA3CQ13748 450 aa16.08■□□□□ 0.16
SREBF1-201ENST00000261646 BORAQ6PGQ7 559 aa16.08■□□□□ 0.16
SREBF1-201ENST00000261646 FAM131AQ6UXB0 335 aa16.08■□□□□ 0.16
SREBF1-201ENST00000261646 RIOX2Q8IUF8 465 aa16.08■□□□□ 0.16
SREBF1-201ENST00000261646 SLC7A5P1Q8MH63 180 aa16.08■□□□□ 0.16
SREBF1-201ENST00000261646 SHKBP1Q8TBC3 707 aa16.08■□□□□ 0.16
SREBF1-201ENST00000261646 PTCD2Q8WV60 388 aaKnown RBP16.08■□□□□ 0.16
SREBF1-201ENST00000261646 GPR21Q99679 349 aa16.08■□□□□ 0.16
SREBF1-201ENST00000261646 MINDY3Q9H8M7 445 aa16.08■□□□□ 0.16
SREBF1-201ENST00000261646 SP140LQ9H930 580 aa16.08■□□□□ 0.16
SREBF1-201ENST00000261646 SACM1LQ9NTJ5 587 aa16.08■□□□□ 0.16
SREBF1-201ENST00000261646 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.08■□□□□ 0.16
SREBF1-201ENST00000261646 CNOT11Q9UKZ1 510 aaKnown RBP16.08■□□□□ 0.16
SREBF1-201ENST00000261646 TUBGCP6Q96RT7 1819 aa16.08■□□□□ 0.16
SREBF1-201ENST00000261646 PKD1L3Q7Z443 1732 aa16.08■□□□□ 0.16
SREBF1-201ENST00000261646 DOT1LQ8TEK3 1739 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms