RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 OR7D4Q8NG98 312 aa12.02□□□□□ -0.48
COL8A1-201ENST00000261037 PMM1Q92871 262 aa12.02□□□□□ -0.48
COL8A1-201ENST00000261037 AZIN2Q96A70 460 aa12.02□□□□□ -0.48
COL8A1-201ENST00000261037 C5orf34Q96MH7 638 aa12.02□□□□□ -0.48
COL8A1-201ENST00000261037 BHLHE41Q9C0J9 482 aaPredicted RBP12.02□□□□□ -0.48
COL8A1-201ENST00000261037 MARCH7Q9H992 704 aa12.02□□□□□ -0.48
COL8A1-201ENST00000261037 MAGEL2Q9UJ55 1249 aa12.02□□□□□ -0.48
COL8A1-201ENST00000261037 CASKO14936 926 aa12.02□□□□□ -0.48
COL8A1-201ENST00000261037 DHX15O43143 795 aaKnown RBP12.02□□□□□ -0.48
COL8A1-201ENST00000261037 AHCYL1O43865 530 aa12.02□□□□□ -0.48
COL8A1-201ENST00000261037 TPST2O60704 377 aa12.02□□□□□ -0.48
COL8A1-201ENST00000261037 IPO13O94829 963 aaKnown RBP12.02□□□□□ -0.48
COL8A1-201ENST00000261037 SAGP10523 405 aaPredicted RBP12.02□□□□□ -0.48
COL8A1-201ENST00000261037 PKMP14618 531 aaKnown RBP12.02□□□□□ -0.48
COL8A1-201ENST00000261037 NMBRP28336 390 aa12.02□□□□□ -0.48
COL8A1-201ENST00000261037 PCDH1Q08174 1060 aa12.02□□□□□ -0.48
COL8A1-201ENST00000261037 GRM3Q14832 879 aa12.02□□□□□ -0.48
COL8A1-201ENST00000261037 NEK5Q6P3R8 708 aa12.02□□□□□ -0.48
COL8A1-201ENST00000261037 LCLAT1Q6UWP7 414 aa12.02□□□□□ -0.48
COL8A1-201ENST00000261037 TRPV3Q8NET8 790 aa12.02□□□□□ -0.48
COL8A1-201ENST00000261037 PLLPQ9Y342 182 aa12.02□□□□□ -0.48
COL8A1-201ENST00000261037 PCDHGC4Q9Y5F7 938 aa12.02□□□□□ -0.48
COL8A1-201ENST00000261037 DGKBQ9Y6T7 804 aa12.02□□□□□ -0.48
COL8A1-201ENST00000261037 DYTNA2CJ06 578 aa12.02□□□□□ -0.49
COL8A1-201ENST00000261037 ARL5CA6NH57 179 aa12.02□□□□□ -0.49
COL8A1-201ENST00000261037 GOT2P00505 430 aaKnown RBP12.02□□□□□ -0.49
COL8A1-201ENST00000261037 C2P06681 752 aa12.02□□□□□ -0.49
COL8A1-201ENST00000261037 LAG3P18627 525 aa12.02□□□□□ -0.49
COL8A1-201ENST00000261037 IL12AP29459 219 aa12.02□□□□□ -0.49
COL8A1-201ENST00000261037 IL18R1Q13478 541 aa12.02□□□□□ -0.49
COL8A1-201ENST00000261037 GTF2H2Q13888 395 aa12.02□□□□□ -0.49
COL8A1-201ENST00000261037 SLC1A5Q15758 541 aa12.02□□□□□ -0.49
COL8A1-201ENST00000261037 GTF2H2CQ6P1K8 395 aa12.02□□□□□ -0.49
COL8A1-201ENST00000261037 OAFQ86UD1 273 aa12.02□□□□□ -0.49
COL8A1-201ENST00000261037 C4orf32Q8N8J7 132 aa12.02□□□□□ -0.49
COL8A1-201ENST00000261037 SMG7Q92540 1137 aaKnown RBP12.02□□□□□ -0.49
COL8A1-201ENST00000261037 CLK4Q9HAZ1 481 aaKnown RBP12.02□□□□□ -0.49
COL8A1-201ENST00000261037 SEC14L3Q9UDX4 400 aa12.02□□□□□ -0.49
COL8A1-201ENST00000261037 IKZF2Q9UKS7 526 aa12.02□□□□□ -0.49
COL8A1-201ENST00000261037 PRAMEF1O95521 474 aa12.02□□□□□ -0.49
COL8A1-201ENST00000261037 VIPP01282 170 aa12.02□□□□□ -0.49
COL8A1-201ENST00000261037 MAT2AP31153 395 aaKnown RBP12.02□□□□□ -0.49
COL8A1-201ENST00000261037 NRLP54845 237 aa12.02□□□□□ -0.49
COL8A1-201ENST00000261037 HSPB3Q12988 150 aa12.02□□□□□ -0.49
COL8A1-201ENST00000261037 GRB14Q14449 540 aa12.02□□□□□ -0.49
COL8A1-201ENST00000261037 GLYATQ6IB77 296 aa12.02□□□□□ -0.49
COL8A1-201ENST00000261037 PRSS55Q6UWB4 352 aaPredicted RBP12.02□□□□□ -0.49
COL8A1-201ENST00000261037 C7orf61Q8IZ16 206 aa12.02□□□□□ -0.49
COL8A1-201ENST00000261037 OR10H5Q8NGA6 315 aa12.02□□□□□ -0.49
COL8A1-201ENST00000261037 PTCD2Q8WV60 388 aaKnown RBP12.02□□□□□ -0.49
COL8A1-201ENST00000261037 TBATAQ96M53 351 aa12.02□□□□□ -0.49
COL8A1-201ENST00000261037 HBEGFQ99075 208 aa12.02□□□□□ -0.49
COL8A1-201ENST00000261037 NEK6Q9HC98 313 aa12.02□□□□□ -0.49
COL8A1-201ENST00000261037 DUS2Q9NX74 493 aaKnown RBP12.02□□□□□ -0.49
COL8A1-201ENST00000261037 LRIG2O94898 1065 aa12.02□□□□□ -0.49
COL8A1-201ENST00000261037 IFNGP01579 166 aa12.02□□□□□ -0.49
COL8A1-201ENST00000261037 NR1H2P55055 460 aa12.02□□□□□ -0.49
COL8A1-201ENST00000261037 SLC20A2Q08357 652 aa12.02□□□□□ -0.49
COL8A1-201ENST00000261037 SIM2Q14190 667 aaPredicted RBP12.02□□□□□ -0.49
COL8A1-201ENST00000261037 GCNT6Q5T4J0 391 aa12.02□□□□□ -0.49
COL8A1-201ENST00000261037 PIK3R6Q5UE93 754 aa12.02□□□□□ -0.49
COL8A1-201ENST00000261037 LIN54Q6MZP7 749 aa12.02□□□□□ -0.49
COL8A1-201ENST00000261037 TATDN1Q6P1N9 297 aa12.02□□□□□ -0.49
COL8A1-201ENST00000261037 CPSF7Q8N684 471 aaKnown RBP12.02□□□□□ -0.49
COL8A1-201ENST00000261037 SLC44A1Q8WWI5 657 aa12.02□□□□□ -0.49
COL8A1-201ENST00000261037 KAT2AQ92830 837 aa12.02□□□□□ -0.49
COL8A1-201ENST00000261037 MRIQ9BWK5 157 aa12.02□□□□□ -0.49
COL8A1-201ENST00000261037 TDRD1Q9BXT4 1180 aaKnown RBP12.02□□□□□ -0.49
COL8A1-201ENST00000261037 IPPKQ9H8X2 491 aa12.02□□□□□ -0.49
COL8A1-201ENST00000261037 PHPT1Q9NRX4 125 aaPredicted RBP12.02□□□□□ -0.49
COL8A1-201ENST00000261037 FAM149AA5PLN7 773 aa12.01□□□□□ -0.49
COL8A1-201ENST00000261037 CDK14O94921 469 aa12.01□□□□□ -0.49
COL8A1-201ENST00000261037 RTP1P59025 263 aa12.01□□□□□ -0.49
COL8A1-201ENST00000261037 STXBP1P61764 594 aaKnown RBP12.01□□□□□ -0.49
COL8A1-201ENST00000261037 ZBTB6Q15916 424 aa12.01□□□□□ -0.49
COL8A1-201ENST00000261037 IQCF2Q8IXL9 164 aa12.01□□□□□ -0.49
COL8A1-201ENST00000261037 LIX1Q8N485 282 aa12.01□□□□□ -0.49
COL8A1-201ENST00000261037 FAM47BQ8NA70 645 aa12.01□□□□□ -0.49
COL8A1-201ENST00000261037 PIK3C3Q8NEB9 887 aa12.01□□□□□ -0.49
COL8A1-201ENST00000261037 TSEN15Q8WW01 171 aaKnown RBP12.01□□□□□ -0.49
COL8A1-201ENST00000261037 KLK6Q92876 244 aa12.01□□□□□ -0.49
COL8A1-201ENST00000261037 DEC1Q9P2X7 70 aa12.01□□□□□ -0.49
COL8A1-201ENST00000261037 H3BNH8 94 aa12.01□□□□□ -0.49
COL8A1-201ENST00000261037 STX16-NPEPL1H3BU86 382 aa12.01□□□□□ -0.49
COL8A1-201ENST00000261037 STX16O14662 325 aa12.01□□□□□ -0.49
COL8A1-201ENST00000261037 HAT1O14929 419 aa12.01□□□□□ -0.49
COL8A1-201ENST00000261037 C22orf31O95567 290 aa12.01□□□□□ -0.49
COL8A1-201ENST00000261037 FABP3P05413 133 aa12.01□□□□□ -0.49
COL8A1-201ENST00000261037 TM4SF1P30408 202 aa12.01□□□□□ -0.49
COL8A1-201ENST00000261037 PPP2R2BQ00005 443 aa12.01□□□□□ -0.49
COL8A1-201ENST00000261037 FAM91A1Q658Y4 838 aa12.01□□□□□ -0.49
COL8A1-201ENST00000261037 NRSN1Q8IZ57 195 aa12.01□□□□□ -0.49
COL8A1-201ENST00000261037 PLD5Q8N7P1 536 aa12.01□□□□□ -0.49
COL8A1-201ENST00000261037 SPPL2BQ8TCT7 592 aa12.01□□□□□ -0.49
COL8A1-201ENST00000261037 CPT1BQ92523 772 aa12.01□□□□□ -0.49
COL8A1-201ENST00000261037 SPOCK2Q92563 424 aa12.01□□□□□ -0.49
COL8A1-201ENST00000261037 CIB1Q99828 191 aa12.01□□□□□ -0.49
COL8A1-201ENST00000261037 SAMD4AQ9UPU9 718 aaKnown RBP12.01□□□□□ -0.49
COL8A1-201ENST00000261037 ROBO3Q96MS0 1386 aa12.01□□□□□ -0.49
COL8A1-201ENST00000261037 B4GALT4O60513 344 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms