RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 F8W8V4 182 aa22.15■■□□□ 1.14
SIX3-201ENST00000260653 CDC7O00311 574 aa22.15■■□□□ 1.14
SIX3-201ENST00000260653 ALOX15P16050 662 aaPredicted RBP22.15■■□□□ 1.14
SIX3-201ENST00000260653 ITGB6P18564 788 aa22.15■■□□□ 1.14
SIX3-201ENST00000260653 LTBRP36941 435 aa22.15■■□□□ 1.14
SIX3-201ENST00000260653 SKIV2L2P42285 1042 aaKnown RBP22.15■■□□□ 1.14
SIX3-201ENST00000260653 TSNQ15631 228 aaKnown RBP22.15■■□□□ 1.14
SIX3-201ENST00000260653 LYPLAL1Q5VWZ2 237 aa22.15■■□□□ 1.14
SIX3-201ENST00000260653 KDM1BQ8NB78 822 aa22.15■■□□□ 1.14
SIX3-201ENST00000260653 KIAA1191Q96A73 305 aa22.15■■□□□ 1.14
SIX3-201ENST00000260653 LINGO1Q96FE5 620 aa22.15■■□□□ 1.14
SIX3-201ENST00000260653 NMUR2Q9GZQ4 415 aa22.15■■□□□ 1.14
SIX3-201ENST00000260653 GNPTGQ9UJJ9 305 aa22.15■■□□□ 1.14
SIX3-201ENST00000260653 UBXN8O00124 270 aa22.14■■□□□ 1.14
SIX3-201ENST00000260653 MTHFD2P13995 350 aa22.14■■□□□ 1.14
SIX3-201ENST00000260653 RALGDSQ12967 914 aa22.14■■□□□ 1.14
SIX3-201ENST00000260653 SLC22A9Q8IVM8 553 aa22.14■■□□□ 1.14
SIX3-201ENST00000260653 SCAMP4Q969E2 229 aa22.14■■□□□ 1.14
SIX3-201ENST00000260653 RILPQ96NA2 401 aa22.14■■□□□ 1.14
SIX3-201ENST00000260653 HCN2Q9UL51 889 aa22.14■■□□□ 1.14
SIX3-201ENST00000260653 ITM2BQ9Y287 266 aa22.14■■□□□ 1.14
SIX3-201ENST00000260653 NPEPPSL1A6NEC2 478 aa22.14■■□□□ 1.13
SIX3-201ENST00000260653 NPHS1O60500 1241 aa22.14■■□□□ 1.13
SIX3-201ENST00000260653 FSBPO95073 299 aa22.14■■□□□ 1.13
SIX3-201ENST00000260653 KAT7O95251 611 aa22.14■■□□□ 1.13
SIX3-201ENST00000260653 HNRNPLP14866 589 aaKnown RBP eCLIP22.14■■□□□ 1.13
SIX3-201ENST00000260653 IL2P60568 153 aa22.14■■□□□ 1.13
SIX3-201ENST00000260653 ATP6V0D1P61421 351 aa22.14■■□□□ 1.13
SIX3-201ENST00000260653 NCALDP61601 193 aa22.14■■□□□ 1.13
SIX3-201ENST00000260653 GRIN2CQ14957 1233 aa22.14■■□□□ 1.13
SIX3-201ENST00000260653 Q6ZVL8 140 aa22.14■■□□□ 1.13
SIX3-201ENST00000260653 ZDHHC2Q9UIJ5 367 aa22.14■■□□□ 1.13
SIX3-201ENST00000260653 BTN3A1O00481 513 aa22.13■■□□□ 1.13
SIX3-201ENST00000260653 FCHO1O14526 889 aa22.13■■□□□ 1.13
SIX3-201ENST00000260653 PRNPP04156 253 aa22.13■■□□□ 1.13
SIX3-201ENST00000260653 MMP12P39900 470 aa22.13■■□□□ 1.13
SIX3-201ENST00000260653 ETV3P41162 512 aa22.13■■□□□ 1.13
SIX3-201ENST00000260653 ZDHHC20Q5W0Z9 365 aa22.13■■□□□ 1.13
SIX3-201ENST00000260653 OR8D1Q8WZ84 308 aa22.13■■□□□ 1.13
SIX3-201ENST00000260653 TRMT61BQ9BVS5 477 aaKnown RBP22.13■■□□□ 1.13
SIX3-201ENST00000260653 TMPRSS11EQ9UL52 423 aa22.13■■□□□ 1.13
SIX3-201ENST00000260653 DHRS7Q9Y394 339 aa22.13■■□□□ 1.13
SIX3-201ENST00000260653 KERAO60938 352 aa22.13■■□□□ 1.13
SIX3-201ENST00000260653 SMIM24O75264 130 aa22.13■■□□□ 1.13
SIX3-201ENST00000260653 TARSP26639 723 aaKnown RBP22.13■■□□□ 1.13
SIX3-201ENST00000260653 IL12RB1P42701 662 aa22.13■■□□□ 1.13
SIX3-201ENST00000260653 IDH3AP50213 366 aa22.13■■□□□ 1.13
SIX3-201ENST00000260653 NFKB2Q00653 900 aa22.13■■□□□ 1.13
SIX3-201ENST00000260653 PRKAA1Q13131 559 aa22.13■■□□□ 1.13
SIX3-201ENST00000260653 TUBB3Q13509 450 aa22.13■■□□□ 1.13
SIX3-201ENST00000260653 ELAVL3Q14576 367 aaKnown RBP22.13■■□□□ 1.13
SIX3-201ENST00000260653 UGT3A1Q6NUS8 523 aa22.13■■□□□ 1.13
SIX3-201ENST00000260653 DPPA4Q7L190 304 aa22.13■■□□□ 1.13
SIX3-201ENST00000260653 STAG3L4Q8TBR4 150 aa22.13■■□□□ 1.13
SIX3-201ENST00000260653 PIP4K2CQ8TBX8 421 aa22.13■■□□□ 1.13
SIX3-201ENST00000260653 HCAR2Q8TDS4 363 aa22.13■■□□□ 1.13
SIX3-201ENST00000260653 ACOX2Q99424 681 aa22.13■■□□□ 1.13
SIX3-201ENST00000260653 SPATA16Q9BXB7 569 aa22.13■■□□□ 1.13
SIX3-201ENST00000260653 COG4Q9H9E3 785 aa22.13■■□□□ 1.13
SIX3-201ENST00000260653 ARMCX1Q9P291 453 aa22.13■■□□□ 1.13
SIX3-201ENST00000260653 TSR3Q9UJK0 312 aaKnown RBP22.13■■□□□ 1.13
SIX3-201ENST00000260653 HAO1Q9UJM8 370 aa22.13■■□□□ 1.13
SIX3-201ENST00000260653 PPM1HQ9ULR3 514 aa22.13■■□□□ 1.13
SIX3-201ENST00000260653 RNF112Q9ULX5 631 aa22.13■■□□□ 1.13
SIX3-201ENST00000260653 ARNTLO00327 626 aa22.12■■□□□ 1.13
SIX3-201ENST00000260653 CBX6O95503 412 aa22.12■■□□□ 1.13
SIX3-201ENST00000260653 TPBGLP0DKB5 382 aa22.12■■□□□ 1.13
SIX3-201ENST00000260653 NFKBIAP25963 317 aa22.12■■□□□ 1.13
SIX3-201ENST00000260653 SOX9P48436 509 aa22.12■■□□□ 1.13
SIX3-201ENST00000260653 RPL14P50914 215 aaKnown RBP22.12■■□□□ 1.13
SIX3-201ENST00000260653 B4GALNT1Q00973 533 aa22.12■■□□□ 1.13
SIX3-201ENST00000260653 MAPK15Q8TD08 544 aa22.12■■□□□ 1.13
SIX3-201ENST00000260653 DNAJC28Q9NX36 388 aa22.12■■□□□ 1.13
SIX3-201ENST00000260653 ZDHHC3Q9NYG2 299 aa22.12■■□□□ 1.13
SIX3-201ENST00000260653 TRIM16O95361 564 aa22.12■■□□□ 1.13
SIX3-201ENST00000260653 ITPRIPL2Q3MIP1 535 aa22.12■■□□□ 1.13
SIX3-201ENST00000260653 EGFLAMQ63HQ2 1017 aa22.12■■□□□ 1.13
SIX3-201ENST00000260653 PTGR2Q8N8N7 351 aaPredicted RBP22.12■■□□□ 1.13
SIX3-201ENST00000260653 UCMAQ8WVF2 138 aa22.12■■□□□ 1.13
SIX3-201ENST00000260653 FUBP1Q96AE4 644 aaKnown RBP22.12■■□□□ 1.13
SIX3-201ENST00000260653 ARRDC3Q96B67 414 aa22.12■■□□□ 1.13
SIX3-201ENST00000260653 CNDP1Q96KN2 507 aa22.12■■□□□ 1.13
SIX3-201ENST00000260653 FAM129BQ96TA1 746 aa22.12■■□□□ 1.13
SIX3-201ENST00000260653 COPS8Q99627 209 aa22.12■■□□□ 1.13
SIX3-201ENST00000260653 STN1Q9H668 368 aaKnown RBP22.12■■□□□ 1.13
SIX3-201ENST00000260653 FBRSL1Q9HCM7 1045 aaKnown RBP22.12■■□□□ 1.13
SIX3-201ENST00000260653 CACNA2D2Q9NY47 1150 aa22.12■■□□□ 1.13
SIX3-201ENST00000260653 CAPN7Q9Y6W3 813 aa22.12■■□□□ 1.13
SIX3-201ENST00000260653 PLXNA2O75051 1894 aa22.11■■□□□ 1.13
SIX3-201ENST00000260653 DIAPH2O60879 1101 aa22.11■■□□□ 1.13
SIX3-201ENST00000260653 ECI2O75521 394 aa22.11■■□□□ 1.13
SIX3-201ENST00000260653 UNC5CO95185 931 aa22.11■■□□□ 1.13
SIX3-201ENST00000260653 SLC25A14O95258 325 aaPredicted RBP22.11■■□□□ 1.13
SIX3-201ENST00000260653 T-ENOLP0DO92 83 aa22.11■■□□□ 1.13
SIX3-201ENST00000260653 IMPDH1P20839 514 aa22.11■■□□□ 1.13
SIX3-201ENST00000260653 MTHFRP42898 656 aa22.11■■□□□ 1.13
SIX3-201ENST00000260653 PFKFB4Q16877 469 aa22.11■■□□□ 1.13
SIX3-201ENST00000260653 ZNF678Q5SXM1 525 aa22.11■■□□□ 1.13
SIX3-201ENST00000260653 CHRDL2Q6WN34 429 aa22.11■■□□□ 1.13
SIX3-201ENST00000260653 MACC1Q6ZN28 852 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms